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The map label for this gene is miaE [H]

Identifier: 148359084

GI number: 148359084

Start: 1780649

End: 1781272

Strand: Direct

Name: miaE [H]

Synonym: LPC_0971

Alternate gene names: 148359084

Gene position: 1780649-1781272 (Clockwise)

Preceding gene: 148359074

Following gene: 148359088

Centisome position: 49.79

GC content: 36.22

Gene sequence:

>624_bases
ATGTTAAAACGATTAGACAGTGATTTACAAACGTTAAATGATTTTTTGAAAGTTAAAACTCCCAAAGCATGGTTGCAACA
TGCCGCCGCTAATATACCTCTTTTATTACTCGATCACGCTCATTGTGAACGTAAAGCGGCCGGAACAGCAATTAATTTCA
TAAGTAAATATCCAGAAAAAGCAGAGTTAGTAGCAATTATGGCGCCATTGGCAAGAGAAGAGTTACTACACTTTGAAAAG
GTCATTGGTATCATGAAGCAAAAAGGAATTGTTTATGCTCCCTTACAGCCGTCAGACTACGCATCGAACTTACATAAGCA
TGTCACAAATAAAGATGGAATTGAGAGGCTATGCGATCAGTTAATTATAGGCGCAATCATTGAGGCTCGATCATGCGAGC
GTTTTAACTCAATAATTCCATATATTGAAGATCAGGACTTAGCCAGGTTTTATAAAACATTGGTTAAATCAGAATGCAGG
CATTTTGAAGAATATTTGTATTTGGCCAAGTTCTATGGAGGCCCTATTGATGATCGTATTTCTGAATTTTTAACTATAGA
AAATACATTTATTTTATCAGATGATATGGTATTTCGCTTTCATAGTGGCTTGCCTCCTGCTTAA

Upstream 100 bases:

>100_bases
TTCATCATCTTTTTTTATTTCGTCCATTTTTTATCCAATTTAAATTCTTTAAAGTATGTGATATAAGGGCTATTTATTTG
AAATTATAGTGTATTTTATC

Downstream 100 bases:

>100_bases
TGCCTTAAAGCAGAGTCAACAGACTTTTCAACACTAGCCTATAAGTATTATGTAGGCTAGTGTTACTCGATATTCCTTTT
GCTTAATTAAGGTCCGCTTG

Product: tRNA-(ms(2)io(6)a)-hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MLKRLDSDLQTLNDFLKVKTPKAWLQHAAANIPLLLLDHAHCERKAAGTAINFISKYPEKAELVAIMAPLAREELLHFEK
VIGIMKQKGIVYAPLQPSDYASNLHKHVTNKDGIERLCDQLIIGAIIEARSCERFNSIIPYIEDQDLARFYKTLVKSECR
HFEEYLYLAKFYGGPIDDRISEFLTIENTFILSDDMVFRFHSGLPPA

Sequences:

>Translated_207_residues
MLKRLDSDLQTLNDFLKVKTPKAWLQHAAANIPLLLLDHAHCERKAAGTAINFISKYPEKAELVAIMAPLAREELLHFEK
VIGIMKQKGIVYAPLQPSDYASNLHKHVTNKDGIERLCDQLIIGAIIEARSCERFNSIIPYIEDQDLARFYKTLVKSECR
HFEEYLYLAKFYGGPIDDRISEFLTIENTFILSDDMVFRFHSGLPPA
>Mature_207_residues
MLKRLDSDLQTLNDFLKVKTPKAWLQHAAANIPLLLLDHAHCERKAAGTAINFISKYPEKAELVAIMAPLAREELLHFEK
VIGIMKQKGIVYAPLQPSDYASNLHKHVTNKDGIERLCDQLIIGAIIEARSCERFNSIIPYIEDQDLARFYKTLVKSECR
HFEEYLYLAKFYGGPIDDRISEFLTIENTFILSDDMVFRFHSGLPPA

Specific function: Production of the modified nucleoside 2-methylthio-cis- ribozeatin (MS[2]IO[6]A) found in some tRNAs. Catalyzes the oxygen-dependent transformation of MS[2]I[6]A into MS[2]IO[6]A [H]

COG id: COG4445

COG function: function code FJ; Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012347
- InterPro:   IPR010386 [H]

Pfam domain/function: PF06175 MiaE [H]

EC number: NA

Molecular weight: Translated: 23678; Mature: 23678

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRLDSDLQTLNDFLKVKTPKAWLQHAAANIPLLLLDHAHCERKAAGTAINFISKYPEK
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCH
AELVAIMAPLAREELLHFEKVIGIMKQKGIVYAPLQPSDYASNLHKHVTNKDGIERLCDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHH
LIIGAIIEARSCERFNSIIPYIEDQDLARFYKTLVKSECRHFEEYLYLAKFYGGPIDDRI
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
SEFLTIENTFILSDDMVFRFHSGLPPA
HHHHHHCCEEEECCCHHHHCCCCCCCC
>Mature Secondary Structure
MLKRLDSDLQTLNDFLKVKTPKAWLQHAAANIPLLLLDHAHCERKAAGTAINFISKYPEK
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCH
AELVAIMAPLAREELLHFEKVIGIMKQKGIVYAPLQPSDYASNLHKHVTNKDGIERLCDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHH
LIIGAIIEARSCERFNSIIPYIEDQDLARFYKTLVKSECRHFEEYLYLAKFYGGPIDDRI
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
SEFLTIENTFILSDDMVFRFHSGLPPA
HHHHHHCCEEEECCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8253666; 11677609 [H]