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The map label for this gene is lssA [H]

Identifier: 148359048

GI number: 148359048

Start: 1741558

End: 1742259

Strand: Direct

Name: lssA [H]

Synonym: LPC_0934

Alternate gene names: 148359048

Gene position: 1741558-1742259 (Clockwise)

Preceding gene: 148359047

Following gene: 148359049

Centisome position: 48.69

GC content: 37.04

Gene sequence:

>702_bases
ATGAAACGATTTTTTTCGATATTGTTTATTCTTTACTGCTGTAATTTATTTGCAATGGCACCTAAGCTTAACTGGGATAA
AGCGATTGACAAAGCAATAAAACGTTATGGACTAAGAGTAGAACCACAATTAATTTCTTATTTTTCTAAAGCCGGGGTTA
GCTACCCTCCTAAAGAAATTGCCTTGCTTGCCTTCAAGTCAGAGCGTAAAGTTGAGTTATGGGCAAAAAATCCAAGCCAG
GAATGGACGCATATTCATGATTACCCATTAACTGGTTTTAGCGGGCGTTTAGGACCCAAATTACGTGAGAATGATAAGCA
GATCCCCGAAGGGATCTATAAATTAGTAAATTTTAATCCTTTTAGCAGCATGCACTTATCCATGATGATTAACTACCCAA
ATAGTTTCGATCGGCAAAAAGGTTATATGGACGGTAGGAAAGAGTTAGGGAATAATATTTTTATTCATGGAAAAAATTTA
TCTGTCGGATGTTTGGCTGTCGGTGACCTTGCCATTGATCAACTGTTTATCTTGGCAAGAAGAGTCGGTCTCAAAAATAT
TCAGGTTATTATTGCCCCTAATGACTTACGATATCAAAAGCCATCAACCTCTACATTTGCCCAACCCAGATGGTTGCCCG
AGCTTTATAAGCAAATAACAGAATCACTCAAACCCTTTAAAAAGACTAAATTTACTGCTTAA

Upstream 100 bases:

>100_bases
ACAAAAAAGGAGTTAAATTAGCGATTTTCTATATTTTAACAAATTGTTCTGATATTTATTATTTGATAGTATGTGTGTAA
CTTACCAGTATAGTGCGTCT

Downstream 100 bases:

>100_bases
TATAAAGATTGGTCTTTTTATTTTATTTAAGTAATTTGAGTATATACTTAAATAAAATAAATAATATAAAGAATAATCAT
AAAAATCATATGAATACTCC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MKRFFSILFILYCCNLFAMAPKLNWDKAIDKAIKRYGLRVEPQLISYFSKAGVSYPPKEIALLAFKSERKVELWAKNPSQ
EWTHIHDYPLTGFSGRLGPKLRENDKQIPEGIYKLVNFNPFSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNL
SVGCLAVGDLAIDQLFILARRVGLKNIQVIIAPNDLRYQKPSTSTFAQPRWLPELYKQITESLKPFKKTKFTA

Sequences:

>Translated_233_residues
MKRFFSILFILYCCNLFAMAPKLNWDKAIDKAIKRYGLRVEPQLISYFSKAGVSYPPKEIALLAFKSERKVELWAKNPSQ
EWTHIHDYPLTGFSGRLGPKLRENDKQIPEGIYKLVNFNPFSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNL
SVGCLAVGDLAIDQLFILARRVGLKNIQVIIAPNDLRYQKPSTSTFAQPRWLPELYKQITESLKPFKKTKFTA
>Mature_233_residues
MKRFFSILFILYCCNLFAMAPKLNWDKAIDKAIKRYGLRVEPQLISYFSKAGVSYPPKEIALLAFKSERKVELWAKNPSQ
EWTHIHDYPLTGFSGRLGPKLRENDKQIPEGIYKLVNFNPFSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNL
SVGCLAVGDLAIDQLFILARRVGLKNIQVIIAPNDLRYQKPSTSTFAQPRWLPELYKQITESLKPFKKTKFTA

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1786418, Length=139, Percent_Identity=32.3741007194245, Blast_Score=77, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 26900; Mature: 26900

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFFSILFILYCCNLFAMAPKLNWDKAIDKAIKRYGLRVEPQLISYFSKAGVSYPPKEI
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHE
ALLAFKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPKLRENDKQIPEGIYKLVNFNP
EEEEECCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCC
FSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNLSVGCLAVGDLAIDQLFILAR
CCCEEEEEEEECCCCCHHHCCCCCHHHHHCCEEEEECCCCEEEEEEECHHHHHHHHHHHH
RVGLKNIQVIIAPNDLRYQKPSTSTFAQPRWLPELYKQITESLKPFKKTKFTA
HCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRFFSILFILYCCNLFAMAPKLNWDKAIDKAIKRYGLRVEPQLISYFSKAGVSYPPKEI
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHE
ALLAFKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPKLRENDKQIPEGIYKLVNFNP
EEEEECCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCC
FSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNLSVGCLAVGDLAIDQLFILAR
CCCEEEEEEEECCCCCHHHCCCCCHHHHHCCEEEEECCCCEEEEEEECHHHHHHHHHHHH
RVGLKNIQVIIAPNDLRYQKPSTSTFAQPRWLPELYKQITESLKPFKKTKFTA
HCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]