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The map label for this gene is 148359022

Identifier: 148359022

GI number: 148359022

Start: 1713357

End: 1713779

Strand: Direct

Name: 148359022

Synonym: LPC_0908

Alternate gene names: NA

Gene position: 1713357-1713779 (Clockwise)

Preceding gene: 148359021

Following gene: 148359025

Centisome position: 47.91

GC content: 36.17

Gene sequence:

>423_bases
ATGAATATCATGATTAAAGTAATAGTCGCGCTTGTTGGAGTATTTTTTTTACCATCAGCAATGGCCTCTAGTCCCACAAC
AACTGATATTGATGCCAGTAAGGATATTTCATCACTGGTATTTCAAGTGATTCAAAACCAGATGGTTTTGGATAGCTCAA
CAGTTGAATCGGCAACAATAGTATTACCTCAAACTCCAACAGACAGCTATGGTGTGCGTATTAAATTAAAAACTATTGCA
GCCACCAAATTTGGGCAAATGACTGCGAACGGTATAGGGAAACAGGGGAGTTTCATTTTAAATGGTATGGTGATATCGAA
TCCAATAATTCGAAGCAGAATTGGAGATGAATTCATTGTAACAGGGTTTAATAAGAAACAGGCCAATCAATTTATTGAAA
GCGTGATGACAAAAAATAATTGA

Upstream 100 bases:

>100_bases
AAAAAAGAGACAACTAGAAGGAACATTTTGTATTTAAAGTATTCAATACTGCAAACACGGGATATAATATACCTTTTTAC
TCTTTCCCAATAATTCTTAT

Downstream 100 bases:

>100_bases
AATTAATGTACCGAAAAATTTATGGGCTAATTTGCCCAGGTTAGTTAGTCTGCAGATTTTGTAACACATCGATTTCCGCA
AGCTGTTTCTATACAGCTTT

Product: putative protein-export membrane protein secD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNIMIKVIVALVGVFFLPSAMASSPTTTDIDASKDISSLVFQVIQNQMVLDSSTVESATIVLPQTPTDSYGVRIKLKTIA
ATKFGQMTANGIGKQGSFILNGMVISNPIIRSRIGDEFIVTGFNKKQANQFIESVMTKNN

Sequences:

>Translated_140_residues
MNIMIKVIVALVGVFFLPSAMASSPTTTDIDASKDISSLVFQVIQNQMVLDSSTVESATIVLPQTPTDSYGVRIKLKTIA
ATKFGQMTANGIGKQGSFILNGMVISNPIIRSRIGDEFIVTGFNKKQANQFIESVMTKNN
>Mature_140_residues
MNIMIKVIVALVGVFFLPSAMASSPTTTDIDASKDISSLVFQVIQNQMVLDSSTVESATIVLPQTPTDSYGVRIKLKTIA
ATKFGQMTANGIGKQGSFILNGMVISNPIIRSRIGDEFIVTGFNKKQANQFIESVMTKNN

Specific function: Unknown

COG id: COG0342

COG function: function code U; Preprotein translocase subunit SecD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15105; Mature: 15105

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIMIKVIVALVGVFFLPSAMASSPTTTDIDASKDISSLVFQVIQNQMVLDSSTVESATI
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE
VLPQTPTDSYGVRIKLKTIAATKFGQMTANGIGKQGSFILNGMVISNPIIRSRIGDEFIV
EEECCCCCCCCEEEEEEEEEHHHCCCHHHCCCCCCCCEEEECEECCCCHHHHHCCCCEEE
TGFNKKQANQFIESVMTKNN
ECCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIMIKVIVALVGVFFLPSAMASSPTTTDIDASKDISSLVFQVIQNQMVLDSSTVESATI
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE
VLPQTPTDSYGVRIKLKTIAATKFGQMTANGIGKQGSFILNGMVISNPIIRSRIGDEFIV
EEECCCCCCCCEEEEEEEEEHHHCCCHHHCCCCCCCCEEEECEECCCCHHHHHCCCCEEE
TGFNKKQANQFIESVMTKNN
ECCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA