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The map label for this gene is yacF [C]

Identifier: 148358996

GI number: 148358996

Start: 1683292

End: 1684038

Strand: Reverse

Name: yacF [C]

Synonym: LPC_0881

Alternate gene names: 148358996

Gene position: 1684038-1683292 (Counterclockwise)

Preceding gene: 148358997

Following gene: 148358988

Centisome position: 47.09

GC content: 32.66

Gene sequence:

>747_bases
ATGCATGACCATATGATAACGTTTCAACTAGCAACTCATTTTTTATCAAGAATTGCCTTGCGCCTGGAGTACCTTTTTAA
AACCATCAATGAAGCTTGTAATGAGTCTCATGAGGTGATTCACCGATTTGCATTAAAGAATATAATCGAGATTGTTGAAA
TAGTTGAAAAGCCGGAATTAAAAAGCAGATTTATCAAAGAGTTAATTAGAATTGAGCATGTACTTAAAAAAGCCAATCTA
TTGAATCATAGTGAATTATTTGATGATCTGGAAACACAAATTCATATGTTAAATCATGTACCAGGTCGATTTAGTAACAA
AATCCATGATGATGAATTTTTAAAAACTTTAAGACAAATCCACCACCCCAATACTAAAGAATGTGAATTTAATTCCCCTC
ATTTGGTATTGTGGTTTGATTCAGATCCCCTAATGAGGCAAAAAACAATTAGTCAATGGGTATCATGCCTGAAGGATCTG
GAAGATACTGTAAAAATTTATTTGTCACTGTTACGAGGTGTTACTCAGTATACTCCCATTAGAGCAAATAATGGATTCTA
TCAGCAAAGTCTTTCACCTAAATCACTTAACCATCTGATCTTGTTAAGAATAGATAAGAAATTGAAAATGATACCCAAAA
TCCAGTTAGGGCATCATAGTTTAACTATCAGGCTTTATGAGCTTATCACTGGTCAAGAAATCAGAGATAAAACAATAGAA
ATGGAAATTGCATTTTGCCAAATATAG

Upstream 100 bases:

>100_bases
GTTTTTAAAATAAACCCAGGAGCCCATTTTTACCCAATGTGCATCTATAAAAATTTAAATTGCCATTATTATAGGATAAA
GCTAAGGATGGCCTTAATCT

Downstream 100 bases:

>100_bases
ACGCCCTATGCGCTATGCTGGCTTTGCGTTAAAGTAAGTCCGCATTAATTAAATTGTATAGTAATTCCTCCACCATAATA
ACGCTCAACACCATTCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MHDHMITFQLATHFLSRIALRLEYLFKTINEACNESHEVIHRFALKNIIEIVEIVEKPELKSRFIKELIRIEHVLKKANL
LNHSELFDDLETQIHMLNHVPGRFSNKIHDDEFLKTLRQIHHPNTKECEFNSPHLVLWFDSDPLMRQKTISQWVSCLKDL
EDTVKIYLSLLRGVTQYTPIRANNGFYQQSLSPKSLNHLILLRIDKKLKMIPKIQLGHHSLTIRLYELITGQEIRDKTIE
MEIAFCQI

Sequences:

>Translated_248_residues
MHDHMITFQLATHFLSRIALRLEYLFKTINEACNESHEVIHRFALKNIIEIVEIVEKPELKSRFIKELIRIEHVLKKANL
LNHSELFDDLETQIHMLNHVPGRFSNKIHDDEFLKTLRQIHHPNTKECEFNSPHLVLWFDSDPLMRQKTISQWVSCLKDL
EDTVKIYLSLLRGVTQYTPIRANNGFYQQSLSPKSLNHLILLRIDKKLKMIPKIQLGHHSLTIRLYELITGQEIRDKTIE
MEIAFCQI
>Mature_248_residues
MHDHMITFQLATHFLSRIALRLEYLFKTINEACNESHEVIHRFALKNIIEIVEIVEKPELKSRFIKELIRIEHVLKKANL
LNHSELFDDLETQIHMLNHVPGRFSNKIHDDEFLKTLRQIHHPNTKECEFNSPHLVLWFDSDPLMRQKTISQWVSCLKDL
EDTVKIYLSLLRGVTQYTPIRANNGFYQQSLSPKSLNHLILLRIDKKLKMIPKIQLGHHSLTIRLYELITGQEIRDKTIE
MEIAFCQI

Specific function: Unknown

COG id: COG4582

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0289 family [H]

Homologues:

Organism=Escherichia coli, GI1786291, Length=241, Percent_Identity=24.896265560166, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009777 [H]

Pfam domain/function: PF07072 DUF1342 [H]

EC number: NA

Molecular weight: Translated: 29348; Mature: 29348

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDHMITFQLATHFLSRIALRLEYLFKTINEACNESHEVIHRFALKNIIEIVEIVEKPEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCH
KSRFIKELIRIEHVLKKANLLNHSELFDDLETQIHMLNHVPGRFSNKIHDDEFLKTLRQI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHH
HHPNTKECEFNSPHLVLWFDSDPLMRQKTISQWVSCLKDLEDTVKIYLSLLRGVTQYTPI
HCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RANNGFYQQSLSPKSLNHLILLRIDKKLKMIPKIQLGHHSLTIRLYELITGQEIRDKTIE
CCCCCHHHCCCCCHHHCCEEEEEECCHHHHCCCEEECCHHHHHHHHHHHCCCHHHHHHHE
MEIAFCQI
EEEEEECC
>Mature Secondary Structure
MHDHMITFQLATHFLSRIALRLEYLFKTINEACNESHEVIHRFALKNIIEIVEIVEKPEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCH
KSRFIKELIRIEHVLKKANLLNHSELFDDLETQIHMLNHVPGRFSNKIHDDEFLKTLRQI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHH
HHPNTKECEFNSPHLVLWFDSDPLMRQKTISQWVSCLKDLEDTVKIYLSLLRGVTQYTPI
HCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RANNGFYQQSLSPKSLNHLILLRIDKKLKMIPKIQLGHHSLTIRLYELITGQEIRDKTIE
CCCCCHHHCCCCCHHHCCEEEEEECCHHHHCCCEEECCHHHHHHHHHHHCCCHHHHHHHE
MEIAFCQI
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782 [H]