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The map label for this gene is degT [H]

Identifier: 148358955

GI number: 148358955

Start: 1638580

End: 1639695

Strand: Direct

Name: degT [H]

Synonym: LPC_0840

Alternate gene names: 148358955

Gene position: 1638580-1639695 (Clockwise)

Preceding gene: 148358954

Following gene: 148358956

Centisome position: 45.82

GC content: 37.63

Gene sequence:

>1116_bases
ATGCAATTTATCGACTTAAAAACACAATATTCTTTAATTGAGAATGATATTTTAAACAGCATTAAAAAGGTATTAAATCA
TGGCCAATATATTATGGGGCCTGAAATTGCAGAACTTGAAAAAGAGTTAGCCACTTTTGTTGGAGTGAAGCATGCGATTG
TGAATTCAAGTGGTACAGATGCTTTATTAATGGCATTGATGGCTCTGGATATTCAGCCTGGGGATGAAGTAATTACAAGC
CCATTTAGTTTCTTCGCAACAGCAGAAGTGATTAGCCTTTGTCATGCAACACCCGTCTTTGTAGATATAGATCCTTTAAC
TTATAATTTGGATCCTGAGCAGTTAGAGAGAGCAATCACTAAGAAAACCAAGGCCATTATGCCAGTTGATTTATATGGGC
AATGCGCAGATTACGATGCGATTAATGCCATTGCAGCTCAATACGGTATTCCTGTTATTGAAGATGCTGCGCAGAGTTTT
GGAGCTACTTATAAAGGCAAATACTCTTGTTCCCTGGCTACTATTGGCTGTACCAGTTTTTTCCCATCAAAACCTTTAGG
TGGTTATGGTGATTCTGGAGCTTGTTTTACGAATGATGATGTATTAGCCCAAAAATTAATTGAAATTAGAATTCATGGGC
AAAATGCCCGCTATTGCCATCATCGGGTAGGGATTAATGGTCGAATGGACACTATCCAAGCAGCAATACTACTTCAGAAA
CTGAAAATATTTTCTAATGAAATTCTAATGCGACAAAAAGTAGCAAAACGTTATGATCAAATGCTTTCTGAGTTAGTGAA
AACTCCTTATGTGCATGAATGCAATGCGAGTGTGTATGCTCAGTATACCATTGAGGTTGAGAATAGAGATGTATTTGCGA
AGTCAATGCAAGCCTCAGGTATACCTACAGCTGTTCATTACCCAATTGCTATGCATCAACAGCAGGCACTTGGTTACTTA
AGTTACAAACTTGGAGATTTTCCAAACTCTGAAAAAGCAAGTCAACATGTAATTAGCCTGCCTATGCACCCTTATTTACA
AGAAGATGAGCAATTGAAAATAGTTGCAGCAGTTAGAAATGCTTTACTTGTGATGAATGAAGAGGCCATGGTATAA

Upstream 100 bases:

>100_bases
GTTTATTGCAACTTTAGATTTGTATTAAGATTATTCCTTAACTTCATGGTATTGATCTTAGGTATAGCTAAACAATTTAT
ATACTAATTATGAGATTATA

Downstream 100 bases:

>100_bases
ATGACACCTAAATTAATCGTTGCGTTGGATTTTGATAATCAAGATAACGCTTTACAGTTGGTTGAAAAACTGGATCCGAA
TCATTGCGCACTTAAGGTTG

Product: aminotransferase WecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MQFIDLKTQYSLIENDILNSIKKVLNHGQYIMGPEIAELEKELATFVGVKHAIVNSSGTDALLMALMALDIQPGDEVITS
PFSFFATAEVISLCHATPVFVDIDPLTYNLDPEQLERAITKKTKAIMPVDLYGQCADYDAINAIAAQYGIPVIEDAAQSF
GATYKGKYSCSLATIGCTSFFPSKPLGGYGDSGACFTNDDVLAQKLIEIRIHGQNARYCHHRVGINGRMDTIQAAILLQK
LKIFSNEILMRQKVAKRYDQMLSELVKTPYVHECNASVYAQYTIEVENRDVFAKSMQASGIPTAVHYPIAMHQQQALGYL
SYKLGDFPNSEKASQHVISLPMHPYLQEDEQLKIVAAVRNALLVMNEEAMV

Sequences:

>Translated_371_residues
MQFIDLKTQYSLIENDILNSIKKVLNHGQYIMGPEIAELEKELATFVGVKHAIVNSSGTDALLMALMALDIQPGDEVITS
PFSFFATAEVISLCHATPVFVDIDPLTYNLDPEQLERAITKKTKAIMPVDLYGQCADYDAINAIAAQYGIPVIEDAAQSF
GATYKGKYSCSLATIGCTSFFPSKPLGGYGDSGACFTNDDVLAQKLIEIRIHGQNARYCHHRVGINGRMDTIQAAILLQK
LKIFSNEILMRQKVAKRYDQMLSELVKTPYVHECNASVYAQYTIEVENRDVFAKSMQASGIPTAVHYPIAMHQQQALGYL
SYKLGDFPNSEKASQHVISLPMHPYLQEDEQLKIVAAVRNALLVMNEEAMV
>Mature_371_residues
MQFIDLKTQYSLIENDILNSIKKVLNHGQYIMGPEIAELEKELATFVGVKHAIVNSSGTDALLMALMALDIQPGDEVITS
PFSFFATAEVISLCHATPVFVDIDPLTYNLDPEQLERAITKKTKAIMPVDLYGQCADYDAINAIAAQYGIPVIEDAAQSF
GATYKGKYSCSLATIGCTSFFPSKPLGGYGDSGACFTNDDVLAQKLIEIRIHGQNARYCHHRVGINGRMDTIQAAILLQK
LKIFSNEILMRQKVAKRYDQMLSELVKTPYVHECNASVYAQYTIEVENRDVFAKSMQASGIPTAVHYPIAMHQQQALGYL
SYKLGDFPNSEKASQHVISLPMHPYLQEDEQLKIVAAVRNALLVMNEEAMV

Specific function: This membrane protein may function as a sensor protein and may transfer the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of the genes [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=370, Percent_Identity=33.2432432432432, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI2367285, Length=338, Percent_Identity=30.1775147928994, Blast_Score=139, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41098; Mature: 41098

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFIDLKTQYSLIENDILNSIKKVLNHGQYIMGPEIAELEKELATFVGVKHAIVNSSGTD
CCEEECHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCHH
ALLMALMALDIQPGDEVITSPFSFFATAEVISLCHATPVFVDIDPLTYNLDPEQLERAIT
HHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCEECCCHHHHHHHHH
KKTKAIMPVDLYGQCADYDAINAIAAQYGIPVIEDAAQSFGATYKGKYSCSLATIGCTSF
HHHHCCCCCHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEEEEHHCC
FPSKPLGGYGDSGACFTNDDVLAQKLIEIRIHGQNARYCHHRVGINGRMDTIQAAILLQK
CCCCCCCCCCCCCCEECCHHHHHHHHHEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHH
LKIFSNEILMRQKVAKRYDQMLSELVKTPYVHECNASVYAQYTIEVENRDVFAKSMQASG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEEEECCCHHHHHHHHCCC
IPTAVHYPIAMHQQQALGYLSYKLGDFPNSEKASQHVISLPMHPYLQEDEQLKIVAAVRN
CCCEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEECCCCCCCCCCCHHHHHHHHHH
ALLVMNEEAMV
HHEEECCCCCC
>Mature Secondary Structure
MQFIDLKTQYSLIENDILNSIKKVLNHGQYIMGPEIAELEKELATFVGVKHAIVNSSGTD
CCEEECHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCHH
ALLMALMALDIQPGDEVITSPFSFFATAEVISLCHATPVFVDIDPLTYNLDPEQLERAIT
HHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCEECCCHHHHHHHHH
KKTKAIMPVDLYGQCADYDAINAIAAQYGIPVIEDAAQSFGATYKGKYSCSLATIGCTSF
HHHHCCCCCHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEEEEHHCC
FPSKPLGGYGDSGACFTNDDVLAQKLIEIRIHGQNARYCHHRVGINGRMDTIQAAILLQK
CCCCCCCCCCCCCCEECCHHHHHHHHHEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHH
LKIFSNEILMRQKVAKRYDQMLSELVKTPYVHECNASVYAQYTIEVENRDVFAKSMQASG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEEEECCCHHHHHHHHCCC
IPTAVHYPIAMHQQQALGYLSYKLGDFPNSEKASQHVISLPMHPYLQEDEQLKIVAAVRN
CCCEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEECCCCCCCCCCCHHHHHHHHHH
ALLVMNEEAMV
HHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2104607 [H]