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The map label for this gene is ybfF [C]

Identifier: 148358937

GI number: 148358937

Start: 1616789

End: 1617955

Strand: Direct

Name: ybfF [C]

Synonym: LPC_0822

Alternate gene names: 148358937

Gene position: 1616789-1617955 (Clockwise)

Preceding gene: 148358935

Following gene: 148358939

Centisome position: 45.21

GC content: 36.5

Gene sequence:

>1167_bases
ATGCCCAAAGAAAAAGTCGTTATTATTATCCCTACCTACAATGAAGAAGATAATATTTCTAATACGATTGATTTGATTCT
TAAGGAGACTTACTCACTCGAAGATTATCAGGTTGACATTCTTGTATTTGATAGTCACTCCACAGATTCTACAGCCCATA
TAGTTCGAGAGCTAACTTATACCTCTCAACGTATTCATTTTGCACAAGAACCACAGAAAACTGGACTTGGTTCCGCTTAC
CTGCAAGCTATGAGAATTGCAATAGACGAGTTAAATGCAGATGTTGTATTTGAGTTTGATGCAGATGGTTCTCATCAACC
TTGTTATATTGCTCCAATGTTAGAGCTACTTAAACAGCATGATGTAGTTGTGGGGAGCCGATATATTTCAGGGGGAAGGA
TTCCCTCAAACTGGGCATTCCATCGTAAATTATTATCTGTGGGAGGTAATTGGGTTGCTCGTATGTTATTAACTGGAAAA
TATAAAGATCTTACTTCTGGCTTAAGAGCAATACGTACCAATCTGTTAAAGAAACTATTGCCTTCAAACTTCCTATCCAA
TAATTACGCGTATAAACTTGAGTTATATTGGCTTTTACACAAGGCAAAAGCCAGGATCGTTGAATTTCCTATTCAATTTA
TTGATAGAGAAAAAGGGAAAAGTAAATTACCCAAGAACAGTATGATTGACACCTTGCGCGTTCTTTTTACCCTTCGCTTC
AGAGAATTACGCCAGTACCTAACTATGTGCTGTGTGGGCTCCATCGGTGCATTGATTCAATTCAGCTTATACAATTGGTT
GCGCAGTTCGAACCATTCCGCTCTGGTATCCAGCCAAGTTGCTATCAGCGCTGCTATTATATCCAATTTTATTTTTCACC
ACTCCATTACATTCAAACAAAAAACCGACTTCCGGATAACTAAAACAACGTTTAGCCGTTTTACACAGTTTATTATTTAT
TCCACATTTATGGTTTATTTTCAAAGCCTATGGGTTCATATTTTTGTCCATTCCTTTGGACAAGGTGTTTTGAAAGAAAA
TATCATTGTAGCCTCAGGTTTGGGCATTGGATCTATTATCAATTACCTGTTTTATTCAAATATTATTTGGTCATCAAAAG
GCACTCATTCTATCAATTCAAACTCTTCTAAAGAAACTCAAATTTGA

Upstream 100 bases:

>100_bases
CTTTACAATAGTAACTGCCACTTAAAGTTTGTTTACGGCAAGTCCACCATTTGATAAGATTTGCTTACTTCTATAATCTG
CTTCTTATGATCTGATCAGT

Downstream 100 bases:

>100_bases
AAGCAAAAGAGATTGGGGGTATAAGTCCTATTTCATTTAAGTATCCAGCTTATTACTGCACCAATAGGCGTAAATGATTG
GCTTACCTTTTTCATCAAAA

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MPKEKVVIIIPTYNEEDNISNTIDLILKETYSLEDYQVDILVFDSHSTDSTAHIVRELTYTSQRIHFAQEPQKTGLGSAY
LQAMRIAIDELNADVVFEFDADGSHQPCYIAPMLELLKQHDVVVGSRYISGGRIPSNWAFHRKLLSVGGNWVARMLLTGK
YKDLTSGLRAIRTNLLKKLLPSNFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFTLRF
RELRQYLTMCCVGSIGALIQFSLYNWLRSSNHSALVSSQVAISAAIISNFIFHHSITFKQKTDFRITKTTFSRFTQFIIY
STFMVYFQSLWVHIFVHSFGQGVLKENIIVASGLGIGSIINYLFYSNIIWSSKGTHSINSNSSKETQI

Sequences:

>Translated_388_residues
MPKEKVVIIIPTYNEEDNISNTIDLILKETYSLEDYQVDILVFDSHSTDSTAHIVRELTYTSQRIHFAQEPQKTGLGSAY
LQAMRIAIDELNADVVFEFDADGSHQPCYIAPMLELLKQHDVVVGSRYISGGRIPSNWAFHRKLLSVGGNWVARMLLTGK
YKDLTSGLRAIRTNLLKKLLPSNFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFTLRF
RELRQYLTMCCVGSIGALIQFSLYNWLRSSNHSALVSSQVAISAAIISNFIFHHSITFKQKTDFRITKTTFSRFTQFIIY
STFMVYFQSLWVHIFVHSFGQGVLKENIIVASGLGIGSIINYLFYSNIIWSSKGTHSINSNSSKETQI
>Mature_387_residues
PKEKVVIIIPTYNEEDNISNTIDLILKETYSLEDYQVDILVFDSHSTDSTAHIVRELTYTSQRIHFAQEPQKTGLGSAYL
QAMRIAIDELNADVVFEFDADGSHQPCYIAPMLELLKQHDVVVGSRYISGGRIPSNWAFHRKLLSVGGNWVARMLLTGKY
KDLTSGLRAIRTNLLKKLLPSNFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFTLRFR
ELRQYLTMCCVGSIGALIQFSLYNWLRSSNHSALVSSQVAISAAIISNFIFHHSITFKQKTDFRITKTTFSRFTQFIIYS
TFMVYFQSLWVHIFVHSFGQGVLKENIIVASGLGIGSIINYLFYSNIIWSSKGTHSINSNSSKETQI

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=242, Percent_Identity=32.2314049586777, Blast_Score=121, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI71999402, Length=238, Percent_Identity=34.453781512605, Blast_Score=125, Evalue=4e-29,
Organism=Saccharomyces cerevisiae, GI6325441, Length=231, Percent_Identity=25.1082251082251, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24585265, Length=238, Percent_Identity=32.3529411764706, Blast_Score=118, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 44384; Mature: 44253

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKEKVVIIIPTYNEEDNISNTIDLILKETYSLEDYQVDILVFDSHSTDSTAHIVRELTY
CCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHH
TSQRIHFAQEPQKTGLGSAYLQAMRIAIDELNADVVFEFDADGSHQPCYIAPMLELLKQH
HHHHHEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEHHHHHHHHHHC
DVVVGSRYISGGRIPSNWAFHRKLLSVGGNWVARMLLTGKYKDLTSGLRAIRTNLLKKLL
CEEEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
PSNFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFTLRF
CCHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RELRQYLTMCCVGSIGALIQFSLYNWLRSSNHSALVSSQVAISAAIISNFIFHHSITFKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEE
KTDFRITKTTFSRFTQFIIYSTFMVYFQSLWVHIFVHSFGQGVLKENIIVASGLGIGSII
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCHHHHH
NYLFYSNIIWSSKGTHSINSNSSKETQI
HHHHHHHHEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PKEKVVIIIPTYNEEDNISNTIDLILKETYSLEDYQVDILVFDSHSTDSTAHIVRELTY
CCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHH
TSQRIHFAQEPQKTGLGSAYLQAMRIAIDELNADVVFEFDADGSHQPCYIAPMLELLKQH
HHHHHEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEHHHHHHHHHHC
DVVVGSRYISGGRIPSNWAFHRKLLSVGGNWVARMLLTGKYKDLTSGLRAIRTNLLKKLL
CEEEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
PSNFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFTLRF
CCHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RELRQYLTMCCVGSIGALIQFSLYNWLRSSNHSALVSSQVAISAAIISNFIFHHSITFKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEE
KTDFRITKTTFSRFTQFIIYSTFMVYFQSLWVHIFVHSFGQGVLKENIIVASGLGIGSII
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCHHHHH
NYLFYSNIIWSSKGTHSINSNSSKETQI
HHHHHHHHEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]