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The map label for this gene is 148358682

Identifier: 148358682

GI number: 148358682

Start: 3093698

End: 3094792

Strand: Direct

Name: 148358682

Synonym: LPC_0559

Alternate gene names: NA

Gene position: 3093698-3094792 (Clockwise)

Preceding gene: 148358683

Following gene: 148358681

Centisome position: 86.5

GC content: 40.46

Gene sequence:

>1095_bases
ATGCGTGTTTCAAAATTACTTTTATTAACTTTGGCATTGAGCGGGAATTTATTTGCTCAAGATATCAAAGTAGTAGGAAC
GTTAAACCAGACATTAAAAGCCCCTCAAAATAAAACACTCAATACAAAACCCGCCATACAACAAATCAAATTGCTTAAAA
TGCAGTTGTCAAATTCTGCTATCAAGGCACTTGCGAGAAAAACAGACATTACACTCAAAAAACCGAATACCATAGCCACA
TCGACAGCTCTCCCATCCAAAGTAGAATTAGGTATGAATAACGTACCTGTTCTGAACCAGGGAAGCTTTGGAACTTGCGT
CACTTTTGCAGCGACTGCGGCCGTAGATGCTGCTTTAAACAAAGGTGACTACATCAGTCAATTGTGCCAATTACAACTAG
GACTGTATCTGGAGAAAAACGGTCATTCACCAAGTGGTTGGGATGGCTCATTAGGGCGCATAGTCTTAAGTCAAATGGAA
AATTTTGGGATAGTCAGCAAAGAAAAACAAAAAAACCTGGGATGTGGTGGACTAACTGAATACCCAGACAACGAGCAACC
TACCCCTGATCATGCCATGTCGCTTGAGCAATTCCATGAAATGAGCGAGGATCCAGAGACTAATCCTGTTATTTACACCC
CCATCCTGGATGTTTATCAGGCTGTATTAGACAGAACAGACTCCAACAAAACGATTAATGATATAAAAACCGCTTTGAAT
CAAAAAGATCGGGTTACTTTTGCAGTATTATTGCTGGATTTTGATTTGGGTGTTATGGGTGCCGTAGGAACGAATAAAAC
ACAATTCGATACTTGGGTACTAACCCCTGAAATTGCCCGTGATATTTATCTTCGCCCATTTTTTGGCGGTCATGAAATGA
TTATCACTGGATATGATGACAATGCCATCGCTGTTGATGACAATGGCCGGGAGCACAAAGGATTATTTACTTTACGTAAT
TCATGGGGTGAGCAATTTGGAGACAAGGGTAATTTTTACATGTCCTATGATTACTTCAAGGTTTTAACTATTGAGGCGCA
ACGTATCCGTGCTCTTGCTGATAATGAATCAGAAGAAGAGTCAATGACGGCCTGA

Upstream 100 bases:

>100_bases
TTTTCTTTCATGGGCATATTAAATATATATTGAATATTATTTGCGCATCAGTTATTCTTGCCAACCATTTCAAGTCCATG
TCACTAACGGAGAATGATAG

Downstream 100 bases:

>100_bases
ACAAATCACCATCATAAAATCAATATAATCGGTTAAGCTAAACTCCCCTCACCCTGGTTCATTTTGCAAGTGGATTAGGT
GAGGGTATTCCTAAACCAAA

Product: cysteine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MRVSKLLLLTLALSGNLFAQDIKVVGTLNQTLKAPQNKTLNTKPAIQQIKLLKMQLSNSAIKALARKTDITLKKPNTIAT
STALPSKVELGMNNVPVLNQGSFGTCVTFAATAAVDAALNKGDYISQLCQLQLGLYLEKNGHSPSGWDGSLGRIVLSQME
NFGIVSKEKQKNLGCGGLTEYPDNEQPTPDHAMSLEQFHEMSEDPETNPVIYTPILDVYQAVLDRTDSNKTINDIKTALN
QKDRVTFAVLLLDFDLGVMGAVGTNKTQFDTWVLTPEIARDIYLRPFFGGHEMIITGYDDNAIAVDDNGREHKGLFTLRN
SWGEQFGDKGNFYMSYDYFKVLTIEAQRIRALADNESEEESMTA

Sequences:

>Translated_364_residues
MRVSKLLLLTLALSGNLFAQDIKVVGTLNQTLKAPQNKTLNTKPAIQQIKLLKMQLSNSAIKALARKTDITLKKPNTIAT
STALPSKVELGMNNVPVLNQGSFGTCVTFAATAAVDAALNKGDYISQLCQLQLGLYLEKNGHSPSGWDGSLGRIVLSQME
NFGIVSKEKQKNLGCGGLTEYPDNEQPTPDHAMSLEQFHEMSEDPETNPVIYTPILDVYQAVLDRTDSNKTINDIKTALN
QKDRVTFAVLLLDFDLGVMGAVGTNKTQFDTWVLTPEIARDIYLRPFFGGHEMIITGYDDNAIAVDDNGREHKGLFTLRN
SWGEQFGDKGNFYMSYDYFKVLTIEAQRIRALADNESEEESMTA
>Mature_364_residues
MRVSKLLLLTLALSGNLFAQDIKVVGTLNQTLKAPQNKTLNTKPAIQQIKLLKMQLSNSAIKALARKTDITLKKPNTIAT
STALPSKVELGMNNVPVLNQGSFGTCVTFAATAAVDAALNKGDYISQLCQLQLGLYLEKNGHSPSGWDGSLGRIVLSQME
NFGIVSKEKQKNLGCGGLTEYPDNEQPTPDHAMSLEQFHEMSEDPETNPVIYTPILDVYQAVLDRTDSNKTINDIKTALN
QKDRVTFAVLLLDFDLGVMGAVGTNKTQFDTWVLTPEIARDIYLRPFFGGHEMIITGYDDNAIAVDDNGREHKGLFTLRN
SWGEQFGDKGNFYMSYDYFKVLTIEAQRIRALADNESEEESMTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40193; Mature: 40193

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSKLLLLTLALSGNLFAQDIKVVGTLNQTLKAPQNKTLNTKPAIQQIKLLKMQLSNSA
CCHHHHHHHHHHHCCCCHHHHHHHEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
IKALARKTDITLKKPNTIATSTALPSKVELGMNNVPVLNQGSFGTCVTFAATAAVDAALN
HHHHHHHCCEEEECCCCEEECCCCCCHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCC
KGDYISQLCQLQLGLYLEKNGHSPSGWDGSLGRIVLSQMENFGIVSKEKQKNLGCGGLTE
CCHHHHHHHHHHHCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCC
YPDNEQPTPDHAMSLEQFHEMSEDPETNPVIYTPILDVYQAVLDRTDSNKTINDIKTALN
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHCCCCCCCHHHHHHHHHC
QKDRVTFAVLLLDFDLGVMGAVGTNKTQFDTWVLTPEIARDIYLRPFFGGHEMIITGYDD
CCCCEEEEEEEEECCCCCEECCCCCCCCCEEEEECHHHHHHEEEEEEECCCEEEEEECCC
NAIAVDDNGREHKGLFTLRNSWGEQFGDKGNFYMSYDYFKVLTIEAQRIRALADNESEEE
CEEEECCCCCCCCCEEEEHHHHHHHHCCCCCEEEEECEEEEEEEEHHHHHHHHCCCCCHH
SMTA
HCCC
>Mature Secondary Structure
MRVSKLLLLTLALSGNLFAQDIKVVGTLNQTLKAPQNKTLNTKPAIQQIKLLKMQLSNSA
CCHHHHHHHHHHHCCCCHHHHHHHEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
IKALARKTDITLKKPNTIATSTALPSKVELGMNNVPVLNQGSFGTCVTFAATAAVDAALN
HHHHHHHCCEEEECCCCEEECCCCCCHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCC
KGDYISQLCQLQLGLYLEKNGHSPSGWDGSLGRIVLSQMENFGIVSKEKQKNLGCGGLTE
CCHHHHHHHHHHHCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCC
YPDNEQPTPDHAMSLEQFHEMSEDPETNPVIYTPILDVYQAVLDRTDSNKTINDIKTALN
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHCCCCCCCHHHHHHHHHC
QKDRVTFAVLLLDFDLGVMGAVGTNKTQFDTWVLTPEIARDIYLRPFFGGHEMIITGYDD
CCCCEEEEEEEEECCCCCEECCCCCCCCCEEEEECHHHHHHEEEEEEECCCEEEEEECCC
NAIAVDDNGREHKGLFTLRNSWGEQFGDKGNFYMSYDYFKVLTIEAQRIRALADNESEEE
CEEEECCCCCCCCCEEEEHHHHHHHHCCCCCEEEEECEEEEEEEEHHHHHHHHCCCCCHH
SMTA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA