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The map label for this gene is ycbC [H]

Identifier: 148358637

GI number: 148358637

Start: 3146193

End: 3146945

Strand: Reverse

Name: ycbC [H]

Synonym: LPC_0513

Alternate gene names: 148358637

Gene position: 3146945-3146193 (Counterclockwise)

Preceding gene: 148358636

Following gene: 148358639

Centisome position: 87.99

GC content: 41.57

Gene sequence:

>753_bases
ATGGCATTCATTAGACATTTGCTTGAATACTTGCTGCATCCTTTCTTTTTATGTCTTTTGGCATTAGGTATTTGCATTTT
TTTACTATATCGTCGGCTTGCTCCCGCTTTCACTAAAGTTATGTTGTTTGTTGTATTGATTGTCTTGCTTGCTATGAGTA
CGGGTTGGTTACCCAGTTATTTAACTTATCAATTAGAGTCTCGATACCCTATAGTGAAGCAGGTTAATCCGAATGTGAAA
TGGGTGGTTGTTCTCGGTGGAGGACAAAATATTGGGGAAGGAATGCCTGCAAATGATCTGTTAACCTCAGCGAGCATCAA
ACGATTGATTGAAGGTGTCCGATTATTCAGAACTTTGCCCGATGCAAAATTGCTTTTATCGGGCGGAGGATCTGCTGGTG
AGCAATCAGAGGCTTTATTATTGACAGAATTAACCAGCTGGTTTGCAATCGATTCGAAAAAAGTTGTCATTGAAACTGCT
TCTATCAATACAGCAGATCAGGCGCGTGAATTAGCAGCCATAGTACATGATCAACCCTTTTATCTGGTTACCTCAGCGAT
TCACATGCCACGTTCCATGGCATTATGCCAGCAGCAAGGGTTGCATCCCATAGCAGCCCCAACTGATTTTACCTTCTTTT
GGTCAACTGATACCTGGGTCAAACTGGTGATACCTAATTCTTATAACCTGGCCTATACTTCCATTGCTCTTCATGAAATC
TTGGGGAAAATTTGGGCTTTGGGATTCCGGTAA

Upstream 100 bases:

>100_bases
CAGTGAGCACAGTATTCCAATGGCCGCCTGAATTGGCTGCCTTTAGTCCTACTCTCATTTTTTCTTTAATTGGAATTTAT
TTAATGCGAAGAGTCAGATA

Downstream 100 bases:

>100_bases
GCTAATGCGCCTTGAGAATTGGTTTTTTTGAATCCGTTATTTACACTACTTGCCCGGCAGCCCAACCGGAAGACCATGCC
CACTGGAAATTATACCCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MAFIRHLLEYLLHPFFLCLLALGICIFLLYRRLAPAFTKVMLFVVLIVLLAMSTGWLPSYLTYQLESRYPIVKQVNPNVK
WVVVLGGGQNIGEGMPANDLLTSASIKRLIEGVRLFRTLPDAKLLLSGGGSAGEQSEALLLTELTSWFAIDSKKVVIETA
SINTADQARELAAIVHDQPFYLVTSAIHMPRSMALCQQQGLHPIAAPTDFTFFWSTDTWVKLVIPNSYNLAYTSIALHEI
LGKIWALGFR

Sequences:

>Translated_250_residues
MAFIRHLLEYLLHPFFLCLLALGICIFLLYRRLAPAFTKVMLFVVLIVLLAMSTGWLPSYLTYQLESRYPIVKQVNPNVK
WVVVLGGGQNIGEGMPANDLLTSASIKRLIEGVRLFRTLPDAKLLLSGGGSAGEQSEALLLTELTSWFAIDSKKVVIETA
SINTADQARELAAIVHDQPFYLVTSAIHMPRSMALCQQQGLHPIAAPTDFTFFWSTDTWVKLVIPNSYNLAYTSIALHEI
LGKIWALGFR
>Mature_249_residues
AFIRHLLEYLLHPFFLCLLALGICIFLLYRRLAPAFTKVMLFVVLIVLLAMSTGWLPSYLTYQLESRYPIVKQVNPNVKW
VVVLGGGQNIGEGMPANDLLTSASIKRLIEGVRLFRTLPDAKLLLSGGGSAGEQSEALLLTELTSWFAIDSKKVVIETAS
INTADQARELAAIVHDQPFYLVTSAIHMPRSMALCQQQGLHPIAAPTDFTFFWSTDTWVKLVIPNSYNLAYTSIALHEIL
GKIWALGFR

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=182, Percent_Identity=31.3186813186813, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 27852; Mature: 27721

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFIRHLLEYLLHPFFLCLLALGICIFLLYRRLAPAFTKVMLFVVLIVLLAMSTGWLPSY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LTYQLESRYPIVKQVNPNVKWVVVLGGGQNIGEGMPANDLLTSASIKRLIEGVRLFRTLP
HHEECCCCCCCCEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
DAKLLLSGGGSAGEQSEALLLTELTSWFAIDSKKVVIETASINTADQARELAAIVHDQPF
CCEEEEECCCCCCCCCCHHHHHHHHHHHEECCCEEEEEECCCCCHHHHHHHHHHHCCCCH
YLVTSAIHMPRSMALCQQQGLHPIAAPTDFTFFWSTDTWVKLVIPNSYNLAYTSIALHEI
HHHHHHHHCHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHH
LGKIWALGFR
HHHHHHCCCC
>Mature Secondary Structure 
AFIRHLLEYLLHPFFLCLLALGICIFLLYRRLAPAFTKVMLFVVLIVLLAMSTGWLPSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LTYQLESRYPIVKQVNPNVKWVVVLGGGQNIGEGMPANDLLTSASIKRLIEGVRLFRTLP
HHEECCCCCCCCEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
DAKLLLSGGGSAGEQSEALLLTELTSWFAIDSKKVVIETASINTADQARELAAIVHDQPF
CCEEEEECCCCCCCCCCHHHHHHHHHHHEECCCEEEEEECCCCCHHHHHHHHHHHCCCCH
YLVTSAIHMPRSMALCQQQGLHPIAAPTDFTFFWSTDTWVKLVIPNSYNLAYTSIALHEI
HHHHHHHHCHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHH
LGKIWALGFR
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]