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The map label for this gene is sbpA

Identifier: 148358579

GI number: 148358579

Start: 3210254

End: 3210970

Strand: Reverse

Name: sbpA

Synonym: LPC_0451

Alternate gene names: NA

Gene position: 3210970-3210254 (Counterclockwise)

Preceding gene: 148358578

Following gene: 148358586

Centisome position: 89.78

GC content: 42.26

Gene sequence:

>717_bases
ATGTTAGTCACGAAGGAAGTGGAATATGAGGATGGTGATACTGTATGCAAAGGTTTTATTGCCTATCATTCCAGTGCCTC
AAAACCATTACCTTGTGTCATGGTTGCTCATGATTGGGGGGGGCGTGGAGAGGGAGCTTGTAACAAAGCGAGACAGCTTG
CTGGCATGGGGTATATTGGATTCGCTATAGACATGTATGGAAATGCCAAGCTAGGTAAAGATAAGGCAGAGAAAAGAGCT
TTAATGACTCCTTTTAGAGAAAATAGAGGGAAGTTAATCACTCGTATAAATGCGGCCTTCAACAAAGTGGTGCAGTTGCC
TGAAGTGGATAGTGAGAAAGTGGCTGCTATTGGTTATTGTTTCGGTGGTTTGTGCGTATTGGACTTGATACGTTCCGGGG
CACCGCTTAAAGGAGTTGTCAGTTTTCATGGGGTATTATTACCTTTGGAGGGTGAGAGTAATAAGTCATTAAATGCGAAA
GTATTGATATTACATGGTTATGATGATCCCTTAGTACCAATTGAGCAAGTTAACCAGTTCGCTATTGAAATGACAGAAAG
GAAAGTGGACTGGCAGGTCCATGTTTATGGCCAAACCGCTCATTCGTTTACTGACCCTGGTGCGAATGATGATGAAATGG
GACTGCATTACAATAAATTAGCGGATCAACGTTCCTGGCAAAGTACTCAATTGTTTTTGCAAGACTTATTTGCATGA

Upstream 100 bases:

>100_bases
AAGGAGCCTTTCTTATTATTTATGGGCAGTTCATTTTATTAAGACTTTGACAGGTAGCTATTAATGCTGTTTGGACGGCC
TTTTAAAAAGGAGGATTAAT

Downstream 100 bases:

>100_bases
TCAGGGCTTACGCTAAACCCCAATCTCTTTGTTAAAAAAGGTTTTTAATTCGGTCATTTAGTTTATCTAAACTCCCTCAT
TAAAAACCTTTTTTGCCTCG

Product: dienelactone hydrolase family transporter protein

Products: NA

Alternate protein names: Dienelactone Hydrolase Family Protein; Carboxymethylenebutenolidase; Dienelactone Hydrolase Family; Hydrolase; Dienelactone Hydrolase Protein; Dienelactone Hydrolase-Related; Dienelactone Hydrolases; Transposase Remnant

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MLVTKEVEYEDGDTVCKGFIAYHSSASKPLPCVMVAHDWGGRGEGACNKARQLAGMGYIGFAIDMYGNAKLGKDKAEKRA
LMTPFRENRGKLITRINAAFNKVVQLPEVDSEKVAAIGYCFGGLCVLDLIRSGAPLKGVVSFHGVLLPLEGESNKSLNAK
VLILHGYDDPLVPIEQVNQFAIEMTERKVDWQVHVYGQTAHSFTDPGANDDEMGLHYNKLADQRSWQSTQLFLQDLFA

Sequences:

>Translated_238_residues
MLVTKEVEYEDGDTVCKGFIAYHSSASKPLPCVMVAHDWGGRGEGACNKARQLAGMGYIGFAIDMYGNAKLGKDKAEKRA
LMTPFRENRGKLITRINAAFNKVVQLPEVDSEKVAAIGYCFGGLCVLDLIRSGAPLKGVVSFHGVLLPLEGESNKSLNAK
VLILHGYDDPLVPIEQVNQFAIEMTERKVDWQVHVYGQTAHSFTDPGANDDEMGLHYNKLADQRSWQSTQLFLQDLFA
>Mature_238_residues
MLVTKEVEYEDGDTVCKGFIAYHSSASKPLPCVMVAHDWGGRGEGACNKARQLAGMGYIGFAIDMYGNAKLGKDKAEKRA
LMTPFRENRGKLITRINAAFNKVVQLPEVDSEKVAAIGYCFGGLCVLDLIRSGAPLKGVVSFHGVLLPLEGESNKSLNAK
VLILHGYDDPLVPIEQVNQFAIEMTERKVDWQVHVYGQTAHSFTDPGANDDEMGLHYNKLADQRSWQSTQLFLQDLFA

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17536419, Length=239, Percent_Identity=36.8200836820084, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17532655, Length=241, Percent_Identity=34.8547717842324, Blast_Score=140, Evalue=6e-34,
Organism=Caenorhabditis elegans, GI17532653, Length=245, Percent_Identity=34.2857142857143, Blast_Score=123, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI17536415, Length=239, Percent_Identity=33.8912133891213, Blast_Score=121, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI193204305, Length=212, Percent_Identity=34.4339622641509, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17534829, Length=155, Percent_Identity=38.7096774193548, Blast_Score=102, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26224; Mature: 26224

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVTKEVEYEDGDTVCKGFIAYHSSASKPLPCVMVAHDWGGRGEGACNKARQLAGMGYIG
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCEEE
FAIDMYGNAKLGKDKAEKRALMTPFRENRGKLITRINAAFNKVVQLPEVDSEKVAAIGYC
EEEEECCCCCCCCCHHHHHHHCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCHHHHHHHH
FGGLCVLDLIRSGAPLKGVVSFHGVLLPLEGESNKSLNAKVLILHGYDDPLVPIEQVNQF
HHHHHHHHHHHCCCCCEEEEEECEEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHHHHH
AIEMTERKVDWQVHVYGQTAHSFTDPGANDDEMGLHYNKLADQRSWQSTQLFLQDLFA
HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MLVTKEVEYEDGDTVCKGFIAYHSSASKPLPCVMVAHDWGGRGEGACNKARQLAGMGYIG
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCEEE
FAIDMYGNAKLGKDKAEKRALMTPFRENRGKLITRINAAFNKVVQLPEVDSEKVAAIGYC
EEEEECCCCCCCCCHHHHHHHCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCHHHHHHHH
FGGLCVLDLIRSGAPLKGVVSFHGVLLPLEGESNKSLNAKVLILHGYDDPLVPIEQVNQF
HHHHHHHHHHHCCCCCEEEEEECEEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHHHHH
AIEMTERKVDWQVHVYGQTAHSFTDPGANDDEMGLHYNKLADQRSWQSTQLFLQDLFA
HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA