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The map label for this gene is lphB

Identifier: 148358574

GI number: 148358574

Start: 3216592

End: 3218235

Strand: Reverse

Name: lphB

Synonym: LPC_0446

Alternate gene names: NA

Gene position: 3218235-3216592 (Counterclockwise)

Preceding gene: 148358571

Following gene: 148358577

Centisome position: 89.98

GC content: 36.92

Gene sequence:

>1644_bases
TTGAGTTCCCTGTTATCAAGAAGAAAAACCATTCTGGTGCTACTGATAGCCATTTATTGCGCCTACGACCTGATGGTCTC
GTTGTATACAGCTTGGGATTTCACAACAGATGATGCTTATATCAGCTGGTATTATGCACGACAGTTAGTGAGTGACAAAG
GGCTGTTTTGGCATGTGACCCTGCCTCCCGTAGAGGGGTATTCCAATTTTTTATGGCTTATGATTGCTGCCTTGGTTATT
AAATTGCAATTACCTCTGGTGAGCAGTATGAAGGTCATTTCCTGTTGTAGCCTGGGATTGGCATTACTGTTTTTATATCG
ACTGGCAAGACTTTTTTGTAGCCCTCTGTTATCCATATTACCGGTTTTTTTATTTAGCCATTATACAGGAGTGACTTGGT
GGACGGTCAGTGGATTAGAAACCTTATTTTACTGCGCTCTGTCTTTGGCATTGATATGGCAGTGTACCTTGGCATTCGGT
TATCAAACTGTTGGTGACAGGCCATGGCCCAATCGATTTTCCCTTTACTCAACCACTCATTGGATAATAACCAATATGCT
CTTGTTACTATTGAGCTTAACACGATTTGAGGGAGTCGTTTGGATAATTCCTTTGGCTGTTTTTATAGGATGTCAATATT
TGAGAGCTCAAAGGGAGCTGGTTTTTAAAGATCATAAGAGATTATTCTTATGGGTTTCAATTATTTTTATTTGCTTTGTA
TTGCCCTATTTTGCGTATTTTATTTGGCGATTAATTTATTTCGGCCATTGGATTCCTAATAGCTATCGTTGCAAAGCGTT
AGCTTATGGGCAGTTTTTGGCAGTAGATTTTGATTATTTTCTTTTTATAACACCATTACTTGTATTGTCGATACCCTATT
TATTATCTGCCAATAAAGATTGTCGCCATGTTTTGCTTTGGTTGCCTTCTGTTTTATATAGTTTGTTGCTTTGGAAAGCA
AATCCTGTAGTCACATACGGTTTGAGACTGTTTTTAAGCCCATTTGCTCTTTTTTCCATATTACCTGTTTTAGGGCTTAA
TCAGTTGATACAATATTTTAAACCTTTCAGATGGGATCCTGAATATCTGGCTGCTGTATTAATGTTATTTGTTACCTGTT
TTTTTGTGTCGGGGAATGATTTACATCATTTATCCAAAGCAGTTACAGAATATAATGAACGCACTCTAAATAGAATGACT
ATTGCTGATTTACTCAACCGAAAGGCCAAAAAGGGCGACAGCGTTCTGTTAGATGATTGTGGGATTATTCCTTTTTTTTC
TCGAGAAGACATTCGATTCATCGACGCGCAATGTTTGAACAATAGCGATTTAACCCAAAAACCATTTAAAAACGATTTAA
GTCTTTACGCTGATTATCTCAATTCTGAAGTGAAGCCTGATTGGGTGATCACCAATTACTACCCTATGGAATCACGAGGT
GATTATTTAACAGATTTGCTATATGAAAAGCATTTTTTTAAAAATTATCATTTAATTAGTACATTAAGCTCGGGTTTTTA
TTTAAACAAAAATCAACCACAAGGGAAAAAAATGATTGATTTTGTGTACCAAATTTTTAAGCGTGTTAATAAACCTGGTT
ACAATGGCTCCCTGGAATTGGAATCCCAGGAGCCAAAGTGGTGA

Upstream 100 bases:

>100_bases
CCATTATTTTTTTTGCATCATGATTTTGGAGCTTGTTGATACTTTATGATATTGCTATTGTGGATTGTGTTATAAAAAAA
TTTCTGGAGCAGAACACATT

Downstream 100 bases:

>100_bases
CTATTGTTGCTCAGAGGGAGAGCTTTGGTTTGAAAAATCTGCGGTCGGTTGGGCTGCTTTTAAGTTTTGCAATAACATAA
TGCTGTTGGTTAACAATATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 547; Mature: 546

Protein sequence:

>547_residues
MSSLLSRRKTILVLLIAIYCAYDLMVSLYTAWDFTTDDAYISWYYARQLVSDKGLFWHVTLPPVEGYSNFLWLMIAALVI
KLQLPLVSSMKVISCCSLGLALLFLYRLARLFCSPLLSILPVFLFSHYTGVTWWTVSGLETLFYCALSLALIWQCTLAFG
YQTVGDRPWPNRFSLYSTTHWIITNMLLLLLSLTRFEGVVWIIPLAVFIGCQYLRAQRELVFKDHKRLFLWVSIIFICFV
LPYFAYFIWRLIYFGHWIPNSYRCKALAYGQFLAVDFDYFLFITPLLVLSIPYLLSANKDCRHVLLWLPSVLYSLLLWKA
NPVVTYGLRLFLSPFALFSILPVLGLNQLIQYFKPFRWDPEYLAAVLMLFVTCFFVSGNDLHHLSKAVTEYNERTLNRMT
IADLLNRKAKKGDSVLLDDCGIIPFFSREDIRFIDAQCLNNSDLTQKPFKNDLSLYADYLNSEVKPDWVITNYYPMESRG
DYLTDLLYEKHFFKNYHLISTLSSGFYLNKNQPQGKKMIDFVYQIFKRVNKPGYNGSLELESQEPKW

Sequences:

>Translated_547_residues
MSSLLSRRKTILVLLIAIYCAYDLMVSLYTAWDFTTDDAYISWYYARQLVSDKGLFWHVTLPPVEGYSNFLWLMIAALVI
KLQLPLVSSMKVISCCSLGLALLFLYRLARLFCSPLLSILPVFLFSHYTGVTWWTVSGLETLFYCALSLALIWQCTLAFG
YQTVGDRPWPNRFSLYSTTHWIITNMLLLLLSLTRFEGVVWIIPLAVFIGCQYLRAQRELVFKDHKRLFLWVSIIFICFV
LPYFAYFIWRLIYFGHWIPNSYRCKALAYGQFLAVDFDYFLFITPLLVLSIPYLLSANKDCRHVLLWLPSVLYSLLLWKA
NPVVTYGLRLFLSPFALFSILPVLGLNQLIQYFKPFRWDPEYLAAVLMLFVTCFFVSGNDLHHLSKAVTEYNERTLNRMT
IADLLNRKAKKGDSVLLDDCGIIPFFSREDIRFIDAQCLNNSDLTQKPFKNDLSLYADYLNSEVKPDWVITNYYPMESRG
DYLTDLLYEKHFFKNYHLISTLSSGFYLNKNQPQGKKMIDFVYQIFKRVNKPGYNGSLELESQEPKW
>Mature_546_residues
SSLLSRRKTILVLLIAIYCAYDLMVSLYTAWDFTTDDAYISWYYARQLVSDKGLFWHVTLPPVEGYSNFLWLMIAALVIK
LQLPLVSSMKVISCCSLGLALLFLYRLARLFCSPLLSILPVFLFSHYTGVTWWTVSGLETLFYCALSLALIWQCTLAFGY
QTVGDRPWPNRFSLYSTTHWIITNMLLLLLSLTRFEGVVWIIPLAVFIGCQYLRAQRELVFKDHKRLFLWVSIIFICFVL
PYFAYFIWRLIYFGHWIPNSYRCKALAYGQFLAVDFDYFLFITPLLVLSIPYLLSANKDCRHVLLWLPSVLYSLLLWKAN
PVVTYGLRLFLSPFALFSILPVLGLNQLIQYFKPFRWDPEYLAAVLMLFVTCFFVSGNDLHHLSKAVTEYNERTLNRMTI
ADLLNRKAKKGDSVLLDDCGIIPFFSREDIRFIDAQCLNNSDLTQKPFKNDLSLYADYLNSEVKPDWVITNYYPMESRGD
YLTDLLYEKHFFKNYHLISTLSSGFYLNKNQPQGKKMIDFVYQIFKRVNKPGYNGSLELESQEPKW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63917; Mature: 63786

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCC
>Mature Secondary Structure 
SSLLSRRKTILVLLIAIYCAYDLMVSLYTAWDFTTDDAYISWYYARQLVSDKGLFWHVT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEE
LPPVEGYSNFLWLMIAALVIKLQLPLVSSMKVISCCSLGLALLFLYRLARLFCSPLLSIL
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVFLFSHYTGVTWWTVSGLETLFYCALSLALIWQCTLAFGYQTVGDRPWPNRFSLYSTTH
HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCEEHHHHHH
WIITNMLLLLLSLTRFEGVVWIIPLAVFIGCQYLRAQRELVFKDHKRLFLWVSIIFICFV
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPYFAYFIWRLIYFGHWIPNSYRCKALAYGQFLAVDFDYFLFITPLLVLSIPYLLSANKD
HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCC
CRHVLLWLPSVLYSLLLWKANPVVTYGLRLFLSPFALFSILPVLGLNQLIQYFKPFRWDP
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
EYLAAVLMLFVTCFFVSGNDLHHLSKAVTEYNERTLNRMTIADLLNRKAKKGDSVLLDDC
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
GIIPFFSREDIRFIDAQCLNNSDLTQKPFKNDLSLYADYLNSEVKPDWVITNYYPMESRG
CCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
DYLTDLLYEKHFFKNYHLISTLSSGFYLNKNQPQGKKMIDFVYQIFKRVNKPGYNGSLEL
HHHHHHHHHHHHHCCHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
ESQEPKW
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA