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The map label for this gene is yjeF [H]

Identifier: 148358563

GI number: 148358563

Start: 3229796

End: 3231277

Strand: Reverse

Name: yjeF [H]

Synonym: LPC_0435

Alternate gene names: 148358563

Gene position: 3231277-3229796 (Counterclockwise)

Preceding gene: 148358562

Following gene: 148358564

Centisome position: 90.35

GC content: 45.14

Gene sequence:

>1482_bases
GTGAACAAGCTAGAAAATGCTCTGTATCGTTGTGATCAAATTAAAGCTTGTGAACAGCAAGCTGCAACTTTGTATCAAAA
AGACGAAAATGCCCTGATGGCTCTGGCTGGCGCAGAGGCATTTTCTTTCTTACAGAAAATCTACCCGCATGTACGGCATA
TAGCCGTCTTCTGTGGTGCTGGCAATAATGCAGGTGATGGTTATGTTTTGGCCAGATTAGCTCATGAACAAGGATTCTCA
GTTACTGTATATCAATGTAAATCAATAGAAGATTTACCTTCCGCTGCCCGGAATGCCGCACGCCTGGCATTGACATCTGG
AGTACATTGTCAATCCGCAGATGAACCTTTAGATGGCGATGCCGAATTAATTGTTGATGCATTATTGGGTATTGGATTAC
AAGGAGCAGTGCATGGGGTAATAGCCAACGCGATTCATCAAATCAATGCCAGTGGGTTACCGGTATTATCGATTGATATT
CCATCTGGTCTTAATGCGGATACAGGATTAGTAGAGAATATTTGCGTCAATGCGACTGCCACAATTACTTTTATCGGACT
TAAAACAGGAATGTATACTTTGGACGGACCAGATTATTGTGGTGTGATTCATTGTGCTCATTTAAACCTGGAGGCATGCA
GAACCAAATTAACCCGATTTGCTTCCCTGCTGAGGGATTCTCCCTTGCCATTGCCTCTCGCAGCTAGAAAAAAGAACTCT
CATAAAGGTGATTATGGACATGTTTTAGTGATAGGCGGAGGTCCAGGAATGCCGGGAGCAGTGAGCTTGGCAGCCAAGGC
GGCACTCAGGACGGGAGCAGGAGTAGTTACTGTTGCAACCTGGCCGGATTATGCGAAGAGCGCTTTAGCCTTAATTCCTG
AAGCGATGATCTGGGGTGTCAAAACAGCAGCGGAGTTAATGCCTTTATTAGCAAAAGCTACGGTTTGTGTTGTTGGGCCT
GGGCTTGGTGATAGTGATTGGGCCAAAACCTTGTTTTTAACCGCCATTACAACCCAACTACCCATGATCATTGATGCTTC
AGCGCTGAGATTACTTTCTCAACATCCCCAAATGGATGACAATTGGATTTTAACACCCCATCCTGGCGAAGCTGCCAGTT
TGCTTTCATGTACTGTAAGAGATGTTCAAACGGATAGATACCATGCGGCATCTGCTATACAAAAACAATATGGTGGTGTT
GTGGTACTGAAAGGAGTAGGCACGGTTATTCAGTCAGCAGAAAGGAATATTTTTGTGTGCCCTCAAGGCAATCCAGGTAT
GGCTACCGCAGGCATGGGGGATATTTTGAGTGGGATTATTGCCGCTTTTTGCGCCCAGGGTTTTACCTTATCCGATGCTG
CGAAGTTGGGCGTGTGGGTCCATGCTGTTGCTGGAGACAAGGTTGCTGAAAAATCAGGAGAAGTTGGGATATTGGCGAGC
GACTTACTTGATGAAATTCCAAGCATTTTGAATTGTATCTAG

Upstream 100 bases:

>100_bases
TAGCCAAGAAGCACTGATTTTTACAGCATGATCTTGGCATAGCGATATAAAAGTATTTTGTGGTCGTTATATCAAATTTA
CGTTAATTTGGAGCCGAGAG

Downstream 100 bases:

>100_bases
TGCGATGAGTCATTAAGAAGGTAAACGGAACTGTTACTTAGGTAACAAACTCTGTTTCAATGCTTGTTTATAACGGCTTG
GCTGACAGGCTTTTTCTAAA

Product: sugar kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MNKLENALYRCDQIKACEQQAATLYQKDENALMALAGAEAFSFLQKIYPHVRHIAVFCGAGNNAGDGYVLARLAHEQGFS
VTVYQCKSIEDLPSAARNAARLALTSGVHCQSADEPLDGDAELIVDALLGIGLQGAVHGVIANAIHQINASGLPVLSIDI
PSGLNADTGLVENICVNATATITFIGLKTGMYTLDGPDYCGVIHCAHLNLEACRTKLTRFASLLRDSPLPLPLAARKKNS
HKGDYGHVLVIGGGPGMPGAVSLAAKAALRTGAGVVTVATWPDYAKSALALIPEAMIWGVKTAAELMPLLAKATVCVVGP
GLGDSDWAKTLFLTAITTQLPMIIDASALRLLSQHPQMDDNWILTPHPGEAASLLSCTVRDVQTDRYHAASAIQKQYGGV
VVLKGVGTVIQSAERNIFVCPQGNPGMATAGMGDILSGIIAAFCAQGFTLSDAAKLGVWVHAVAGDKVAEKSGEVGILAS
DLLDEIPSILNCI

Sequences:

>Translated_493_residues
MNKLENALYRCDQIKACEQQAATLYQKDENALMALAGAEAFSFLQKIYPHVRHIAVFCGAGNNAGDGYVLARLAHEQGFS
VTVYQCKSIEDLPSAARNAARLALTSGVHCQSADEPLDGDAELIVDALLGIGLQGAVHGVIANAIHQINASGLPVLSIDI
PSGLNADTGLVENICVNATATITFIGLKTGMYTLDGPDYCGVIHCAHLNLEACRTKLTRFASLLRDSPLPLPLAARKKNS
HKGDYGHVLVIGGGPGMPGAVSLAAKAALRTGAGVVTVATWPDYAKSALALIPEAMIWGVKTAAELMPLLAKATVCVVGP
GLGDSDWAKTLFLTAITTQLPMIIDASALRLLSQHPQMDDNWILTPHPGEAASLLSCTVRDVQTDRYHAASAIQKQYGGV
VVLKGVGTVIQSAERNIFVCPQGNPGMATAGMGDILSGIIAAFCAQGFTLSDAAKLGVWVHAVAGDKVAEKSGEVGILAS
DLLDEIPSILNCI
>Mature_493_residues
MNKLENALYRCDQIKACEQQAATLYQKDENALMALAGAEAFSFLQKIYPHVRHIAVFCGAGNNAGDGYVLARLAHEQGFS
VTVYQCKSIEDLPSAARNAARLALTSGVHCQSADEPLDGDAELIVDALLGIGLQGAVHGVIANAIHQINASGLPVLSIDI
PSGLNADTGLVENICVNATATITFIGLKTGMYTLDGPDYCGVIHCAHLNLEACRTKLTRFASLLRDSPLPLPLAARKKNS
HKGDYGHVLVIGGGPGMPGAVSLAAKAALRTGAGVVTVATWPDYAKSALALIPEAMIWGVKTAAELMPLLAKATVCVVGP
GLGDSDWAKTLFLTAITTQLPMIIDASALRLLSQHPQMDDNWILTPHPGEAASLLSCTVRDVQTDRYHAASAIQKQYGGV
VVLKGVGTVIQSAERNIFVCPQGNPGMATAGMGDILSGIIAAFCAQGFTLSDAAKLGVWVHAVAGDKVAEKSGEVGILAS
DLLDEIPSILNCI

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI91984773, Length=175, Percent_Identity=29.7142857142857, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI1790609, Length=497, Percent_Identity=39.8390342052314, Blast_Score=324, Evalue=7e-90,
Organism=Caenorhabditis elegans, GI17554656, Length=276, Percent_Identity=26.4492753623188, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17509719, Length=194, Percent_Identity=29.3814432989691, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI221329809, Length=177, Percent_Identity=28.8135593220339, Blast_Score=73, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 51532; Mature: 51532

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLENALYRCDQIKACEQQAATLYQKDENALMALAGAEAFSFLQKIYPHVRHIAVFCGA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHEEEEEEEC
GNNAGDGYVLARLAHEQGFSVTVYQCKSIEDLPSAARNAARLALTSGVHCQSADEPLDGD
CCCCCCCCEEEEEHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AELIVDALLGIGLQGAVHGVIANAIHQINASGLPVLSIDIPSGLNADTGLVENICVNATA
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCEE
TITFIGLKTGMYTLDGPDYCGVIHCAHLNLEACRTKLTRFASLLRDSPLPLPLAARKKNS
EEEEEEEECCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCC
HKGDYGHVLVIGGGPGMPGAVSLAAKAALRTGAGVVTVATWPDYAKSALALIPEAMIWGV
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
KTAAELMPLLAKATVCVVGPGLGDSDWAKTLFLTAITTQLPMIIDASALRLLSQHPQMDD
HHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHCCCCCC
NWILTPHPGEAASLLSCTVRDVQTDRYHAASAIQKQYGGVVVLKGVGTVIQSAERNIFVC
CEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECHHHHHHCCCCCEEEE
PQGNPGMATAGMGDILSGIIAAFCAQGFTLSDAAKLGVWVHAVAGDKVAEKSGEVGILAS
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCEEEEEECCCHHHHCCCCEEEEHH
DLLDEIPSILNCI
HHHHHHHHHHHCC
>Mature Secondary Structure
MNKLENALYRCDQIKACEQQAATLYQKDENALMALAGAEAFSFLQKIYPHVRHIAVFCGA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHEEEEEEEC
GNNAGDGYVLARLAHEQGFSVTVYQCKSIEDLPSAARNAARLALTSGVHCQSADEPLDGD
CCCCCCCCEEEEEHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AELIVDALLGIGLQGAVHGVIANAIHQINASGLPVLSIDIPSGLNADTGLVENICVNATA
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCEE
TITFIGLKTGMYTLDGPDYCGVIHCAHLNLEACRTKLTRFASLLRDSPLPLPLAARKKNS
EEEEEEEECCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCC
HKGDYGHVLVIGGGPGMPGAVSLAAKAALRTGAGVVTVATWPDYAKSALALIPEAMIWGV
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
KTAAELMPLLAKATVCVVGPGLGDSDWAKTLFLTAITTQLPMIIDASALRLLSQHPQMDD
HHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHCCCCCC
NWILTPHPGEAASLLSCTVRDVQTDRYHAASAIQKQYGGVVVLKGVGTVIQSAERNIFVC
CEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECHHHHHHCCCCCEEEE
PQGNPGMATAGMGDILSGIIAAFCAQGFTLSDAAKLGVWVHAVAGDKVAEKSGEVGILAS
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCEEEEEECCCHHHHCCCCEEEEHH
DLLDEIPSILNCI
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7511774 [H]