| Definition | Legionella pneumophila str. Corby chromosome, complete genome. |
|---|---|
| Accession | NC_009494 |
| Length | 3,576,470 |
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The map label for this gene is pheT [H]
Identifier: 148358553
GI number: 148358553
Start: 3237253
End: 3239634
Strand: Reverse
Name: pheT [H]
Synonym: LPC_0425
Alternate gene names: 148358553
Gene position: 3239634-3237253 (Counterclockwise)
Preceding gene: 148358552
Following gene: 148358554
Centisome position: 90.58
GC content: 41.14
Gene sequence:
>2382_bases ATGAAAGTAAGTAAGTTATGGTTACGAGAATGGGTAAACTTCTCATTAACTGAACAAGAACTGGCTGAGCAATTGACCAT GGCTGGCTTGGAAGTCGACGCAGTGAATCCTGTAGCTGGCCAATTCACTCATGTCATTGTTGCTGAAGTCTTAAATACCA AGCCTCATCCAGATGCTGATAAATTAACCTTATGTGAAGTGAATATCAATAAAGACAAGCCGCTGAAAATTGTTTGTGGT GCGGCTAATGTGAGGCCTGGTTTGAGAGTTGCCCTGGCCATGATTGGGGCACACTTGCCTGGCGGTTTGCAAATTAAGGA ATCCAAATTGCGTGGAGAATTGTCTCAGGGCATGTTGTGTTCCGCGACAGAACTGGGACTGGCAGAACATTCCGAGGGGA TAATGGAACTGAGTGATGAGGCACCAATTGGAATGGATTTACGCGAGTATCTTGCCCTTGATGACCATGTATTTGATATT GATTTGACTCCGAATCGCGCAGATTGCTTTAGTATTTTAGGTGTCGCGCGGGAAGTGGCTGTTCTCAATAAATTACCCTT AATAGAGCAACCAATAGTTACAGTACCACCAGCCATCGATGATGGTCTTCGAGTGAATTTAATTCATTCTGATGCATGTC CACGGTATTGCGGTCGAATTATCCGTAATTTAAATCTTGAAGCGAAAACGCCATTATGGATGGCTGAGCGCTTACGTAGA GGCGGCATTAGAACGTTGCACCCTGTAGTGGATGTGATGAATTATGTCATGCTCGAGCTTGGACAACCCATGCATGCTTT TGATTTATCAAAAATTAACGGTGAAATTAACGTACGTTATAGTGCTTCAGGCGAGCAATTAGAATTATTGGATGGTCAAG AAGTTGTATTAAACGACAATGTGTTGGTAATCGCTGATAAAGAAAAGCCTCTGGCTATGGCTGGAATAATGGGAGGAGCT AACAGCGCCGTTCAAGAGCATACACAACATGTTTTCCTGGAAAGCGCCTATTTTAATCCGGTGACAATTGCCGGAGTTGC CAGAAAATATGGCTTATTCAGTGATTCGTCACAACGATTCGAACGGGGAGTAGATCCTTGTTTGCAATCAAAAGCGCTTG AAAGAGCAACGGAATTGATTTTATCTATTTCAGGAGGTGAACCTGGGCCAGTGATAGAGTCTTTTGACAAAAAGTTTTTG CCAGGTACAGTTTCCTTTTTATTTGATACGACAAAAGTGAAAAAGTTAACTGGGCTGTCTATCCCTCTAAACGAAATGAA AAATTTACTGGAAGGTTTAGGTGTTGTCATCATCAAAGAAACCAATCATTTTTTTGAAGTCACCATTCCTTCTCATCGAG TCGATTTGCAACAAGATGCTGATTTGGTTGAAGAAATTATTCGTTTATATGGCTATGACAAGTTACAAGCTCAGCCAATG CAAACATCAGTACAAGCTGGTTTAATCAGTGCCAAGGAAAAAATTGCGACACACGTTTCATCGTGGTTTAGTGCCAAAGG CTATCATGAAACCATCAGTTATAGCTTTGTCGATCCTGAGCTGCAGGAAGCGCTTTACCCACAAAAAGAATTTATGGAAC TGCTTAATCCAATTTCCTCTGAATTATCGCAAATGCGTGCGGGAATGTGGCCAGGCTTAATTGCATCCATGATTTATAAT TGCCACAGGCAACAAACCGCAGTGAAATTTTTTGAAATAGGCGTGGTTTTTGATCTGGACGGAGGGCAATTAAAGGAGCG TTCATGTATTGCTGGCTTGTTAATGGGGGAGCAAGGCAATTTGAATTGGAGTGAATCTGCCCGTTTATTTGATTTTTATG ATTTAAAAGGGGATTTGCAATCCTTGTTTGCTTCATTGAAGCTGGATGATGTTGAATTTATTCAATCATCTCATCATGCG CTTCACCCTGGTCAGTCAGCCCAGATTGTGATTAATGGCAAGCATTCAGGCTGGATAGGTGTGCTGCATCCTCGCTTGTC GGACGCCTTTGATCTTGACCAGGATGTGGTTTTGTTTGAATTGAATCTTGAATCATTAATCAATCCGACTATTCCTCTGT ATAAGCCTATTTCCAAATATCCACAAATAAGGAGAGATTTGTCTTTCCTGGTTGATAGACAGATAAGTGCCATGCAGATT GAGCGCGTAATCAGAAATACAGTTAAAGAGGATTGGTTAAAATCGTTTGACGTATTTGACGTGTACATGGGTAAAGGTAT TCCAGAAGATAAAAAAAGTATTGCTGTGGCTATGACACTACAGGACGATACTCGAACTTTAGTTGATGCCGAGATCAATT TAACAATTAGTGCTATAATCAAGAAACTGGAAAATGAATTTTCAATCCTTTTGAGGGAATGA
Upstream 100 bases:
>100_bases AATAGTTATCAGTAATTTTATCTCTATTATCATAGGGAGAGCAAAATTAACGGATGGAAACTTTGAGCCAAATGAACAGT TACAGAGATGAGGACTTTAA
Downstream 100 bases:
>100_bases TCGTGAACGCACTAAGCAAAGCAATAATGGCAGAAACATTGTGTGACGAATTAAAATTAAATAAACCAGTTGCTAAAGAA ATGGTTGAAAATTTTTTTGA
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]
Number of amino acids: Translated: 793; Mature: 793
Protein sequence:
>793_residues MKVSKLWLREWVNFSLTEQELAEQLTMAGLEVDAVNPVAGQFTHVIVAEVLNTKPHPDADKLTLCEVNINKDKPLKIVCG AANVRPGLRVALAMIGAHLPGGLQIKESKLRGELSQGMLCSATELGLAEHSEGIMELSDEAPIGMDLREYLALDDHVFDI DLTPNRADCFSILGVAREVAVLNKLPLIEQPIVTVPPAIDDGLRVNLIHSDACPRYCGRIIRNLNLEAKTPLWMAERLRR GGIRTLHPVVDVMNYVMLELGQPMHAFDLSKINGEINVRYSASGEQLELLDGQEVVLNDNVLVIADKEKPLAMAGIMGGA NSAVQEHTQHVFLESAYFNPVTIAGVARKYGLFSDSSQRFERGVDPCLQSKALERATELILSISGGEPGPVIESFDKKFL PGTVSFLFDTTKVKKLTGLSIPLNEMKNLLEGLGVVIIKETNHFFEVTIPSHRVDLQQDADLVEEIIRLYGYDKLQAQPM QTSVQAGLISAKEKIATHVSSWFSAKGYHETISYSFVDPELQEALYPQKEFMELLNPISSELSQMRAGMWPGLIASMIYN CHRQQTAVKFFEIGVVFDLDGGQLKERSCIAGLLMGEQGNLNWSESARLFDFYDLKGDLQSLFASLKLDDVEFIQSSHHA LHPGQSAQIVINGKHSGWIGVLHPRLSDAFDLDQDVVLFELNLESLINPTIPLYKPISKYPQIRRDLSFLVDRQISAMQI ERVIRNTVKEDWLKSFDVFDVYMGKGIPEDKKSIAVAMTLQDDTRTLVDAEINLTISAIIKKLENEFSILLRE
Sequences:
>Translated_793_residues MKVSKLWLREWVNFSLTEQELAEQLTMAGLEVDAVNPVAGQFTHVIVAEVLNTKPHPDADKLTLCEVNINKDKPLKIVCG AANVRPGLRVALAMIGAHLPGGLQIKESKLRGELSQGMLCSATELGLAEHSEGIMELSDEAPIGMDLREYLALDDHVFDI DLTPNRADCFSILGVAREVAVLNKLPLIEQPIVTVPPAIDDGLRVNLIHSDACPRYCGRIIRNLNLEAKTPLWMAERLRR GGIRTLHPVVDVMNYVMLELGQPMHAFDLSKINGEINVRYSASGEQLELLDGQEVVLNDNVLVIADKEKPLAMAGIMGGA NSAVQEHTQHVFLESAYFNPVTIAGVARKYGLFSDSSQRFERGVDPCLQSKALERATELILSISGGEPGPVIESFDKKFL PGTVSFLFDTTKVKKLTGLSIPLNEMKNLLEGLGVVIIKETNHFFEVTIPSHRVDLQQDADLVEEIIRLYGYDKLQAQPM QTSVQAGLISAKEKIATHVSSWFSAKGYHETISYSFVDPELQEALYPQKEFMELLNPISSELSQMRAGMWPGLIASMIYN CHRQQTAVKFFEIGVVFDLDGGQLKERSCIAGLLMGEQGNLNWSESARLFDFYDLKGDLQSLFASLKLDDVEFIQSSHHA LHPGQSAQIVINGKHSGWIGVLHPRLSDAFDLDQDVVLFELNLESLINPTIPLYKPISKYPQIRRDLSFLVDRQISAMQI ERVIRNTVKEDWLKSFDVFDVYMGKGIPEDKKSIAVAMTLQDDTRTLVDAEINLTISAIIKKLENEFSILLRE >Mature_793_residues MKVSKLWLREWVNFSLTEQELAEQLTMAGLEVDAVNPVAGQFTHVIVAEVLNTKPHPDADKLTLCEVNINKDKPLKIVCG AANVRPGLRVALAMIGAHLPGGLQIKESKLRGELSQGMLCSATELGLAEHSEGIMELSDEAPIGMDLREYLALDDHVFDI DLTPNRADCFSILGVAREVAVLNKLPLIEQPIVTVPPAIDDGLRVNLIHSDACPRYCGRIIRNLNLEAKTPLWMAERLRR GGIRTLHPVVDVMNYVMLELGQPMHAFDLSKINGEINVRYSASGEQLELLDGQEVVLNDNVLVIADKEKPLAMAGIMGGA NSAVQEHTQHVFLESAYFNPVTIAGVARKYGLFSDSSQRFERGVDPCLQSKALERATELILSISGGEPGPVIESFDKKFL PGTVSFLFDTTKVKKLTGLSIPLNEMKNLLEGLGVVIIKETNHFFEVTIPSHRVDLQQDADLVEEIIRLYGYDKLQAQPM QTSVQAGLISAKEKIATHVSSWFSAKGYHETISYSFVDPELQEALYPQKEFMELLNPISSELSQMRAGMWPGLIASMIYN CHRQQTAVKFFEIGVVFDLDGGQLKERSCIAGLLMGEQGNLNWSESARLFDFYDLKGDLQSLFASLKLDDVEFIQSSHHA LHPGQSAQIVINGKHSGWIGVLHPRLSDAFDLDQDVVLFELNLESLINPTIPLYKPISKYPQIRRDLSFLVDRQISAMQI ERVIRNTVKEDWLKSFDVFDVYMGKGIPEDKKSIAVAMTLQDDTRTLVDAEINLTISAIIKKLENEFSILLRE
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788006, Length=797, Percent_Identity=46.4240903387704, Blast_Score=717, Evalue=0.0,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 [H]
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]
EC number: =6.1.1.20 [H]
Molecular weight: Translated: 88292; Mature: 88292
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSKLWLREWVNFSLTEQELAEQLTMAGLEVDAVNPVAGQFTHVIVAEVLNTKPHPDAD CCCHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCC KLTLCEVNINKDKPLKIVCGAANVRPGLRVALAMIGAHLPGGLQIKESKLRGELSQGMLC CEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCEE SATELGLAEHSEGIMELSDEAPIGMDLREYLALDDHVFDIDLTPNRADCFSILGVAREVA CHHHCCCHHCCCCHHEECCCCCCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHH VLNKLPLIEQPIVTVPPAIDDGLRVNLIHSDACPRYCGRIIRNLNLEAKTPLWMAERLRR HHHCCCCCCCCCEECCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH GGIRTLHPVVDVMNYVMLELGQPMHAFDLSKINGEINVRYSASGEQLELLDGQEVVLNDN CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCCEEEEECCCEEEEECC VLVIADKEKPLAMAGIMGGANSAVQEHTQHVFLESAYFNPVTIAGVARKYGLFSDSSQRF EEEEECCCCCEEEEEECCCCCHHHHHHHHHHEEEECCCCCEEHHHHHHHHCCCCCCHHHH ERGVDPCLQSKALERATELILSISGGEPGPVIESFDKKFLPGTVSFLFDTTKVKKLTGLS HHCCCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHCHHCCCCHHHHHHCHHHHHHHCCCC IPLNEMKNLLEGLGVVIIKETNHFFEVTIPSHRVDLQQDADLVEEIIRLYGYDKLQAQPM CCHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCH QTSVQAGLISAKEKIATHVSSWFSAKGYHETISYSFVDPELQEALYPQKEFMELLNPISS HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCHHHHHHHCCHHHHHHHHHHHHH ELSQMRAGMWPGLIASMIYNCHRQQTAVKFFEIGVVFDLDGGQLKERSCIAGLLMGEQGN HHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCHHHHHHHHHEECCCCC LNWSESARLFDFYDLKGDLQSLFASLKLDDVEFIQSSHHALHPGQSAQIVINGKHSGWIG CCCCCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCEEE VLHPRLSDAFDLDQDVVLFELNLESLINPTIPLYKPISKYPQIRRDLSFLVDRQISAMQI EECCCCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH ERVIRNTVKEDWLKSFDVFDVYMGKGIPEDKKSIAVAMTLQDDTRTLVDAEINLTISAII HHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEEECEEHHHHH KKLENEFSILLRE HHHHHHHHHEECC >Mature Secondary Structure MKVSKLWLREWVNFSLTEQELAEQLTMAGLEVDAVNPVAGQFTHVIVAEVLNTKPHPDAD CCCHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCC KLTLCEVNINKDKPLKIVCGAANVRPGLRVALAMIGAHLPGGLQIKESKLRGELSQGMLC CEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCEE SATELGLAEHSEGIMELSDEAPIGMDLREYLALDDHVFDIDLTPNRADCFSILGVAREVA CHHHCCCHHCCCCHHEECCCCCCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHH VLNKLPLIEQPIVTVPPAIDDGLRVNLIHSDACPRYCGRIIRNLNLEAKTPLWMAERLRR HHHCCCCCCCCCEECCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH GGIRTLHPVVDVMNYVMLELGQPMHAFDLSKINGEINVRYSASGEQLELLDGQEVVLNDN CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCCEEEEECCCEEEEECC VLVIADKEKPLAMAGIMGGANSAVQEHTQHVFLESAYFNPVTIAGVARKYGLFSDSSQRF EEEEECCCCCEEEEEECCCCCHHHHHHHHHHEEEECCCCCEEHHHHHHHHCCCCCCHHHH ERGVDPCLQSKALERATELILSISGGEPGPVIESFDKKFLPGTVSFLFDTTKVKKLTGLS HHCCCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHCHHCCCCHHHHHHCHHHHHHHCCCC IPLNEMKNLLEGLGVVIIKETNHFFEVTIPSHRVDLQQDADLVEEIIRLYGYDKLQAQPM CCHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCH QTSVQAGLISAKEKIATHVSSWFSAKGYHETISYSFVDPELQEALYPQKEFMELLNPISS HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCHHHHHHHCCHHHHHHHHHHHHH ELSQMRAGMWPGLIASMIYNCHRQQTAVKFFEIGVVFDLDGGQLKERSCIAGLLMGEQGN HHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCHHHHHHHHHEECCCCC LNWSESARLFDFYDLKGDLQSLFASLKLDDVEFIQSSHHALHPGQSAQIVINGKHSGWIG CCCCCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCEEE VLHPRLSDAFDLDQDVVLFELNLESLINPTIPLYKPISKYPQIRRDLSFLVDRQISAMQI EECCCCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH ERVIRNTVKEDWLKSFDVFDVYMGKGIPEDKKSIAVAMTLQDDTRTLVDAEINLTISAII HHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEEECEEHHHHH KKLENEFSILLRE HHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA