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The map label for this gene is pvcB

Identifier: 148358392

GI number: 148358392

Start: 265702

End: 266538

Strand: Direct

Name: pvcB

Synonym: LPC_0257

Alternate gene names: NA

Gene position: 265702-266538 (Clockwise)

Preceding gene: 148358391

Following gene: 148358393

Centisome position: 7.43

GC content: 39.78

Gene sequence:

>837_bases
ATGAATTATAAAGTGACTTCTCTAAAACCATTTGGAGTACTCTTGGAGCCTGTGAGTGAAAAAACGAAGGTGACTGATGT
CGATATAGAGAACTTGCGCCATTTATTTGCAAAGAATCAACTCGTTGTATTAAGAGGCTTTTGCGCCTTTCAAAATGCGG
AGGATTTTTCTAATTATTGTGAGTTGTGGGGAGAAGTCAGCCTTTGGCCATTTGGCAAGGTACTTGAGTTAATTGAGCAA
GAGGATCCGGAAGATCATATTTTTGATCATAGTTACATGCCCTTGCATTGGGATGGTATGTATCGACCCCAGGTGCCTGA
ATATCAGATTTTTCATTGTGTGAAAGCGCCTTTGCCTGGACAAGGAGGAAGGACCACTTTTTCAAACACAATTTTAGCGT
TACAGTTTGCCTCTTCAGAAATCAAAGAATTATGGAATAAGGTGTGTGGTACCTACCAAAGGAAAATGGAGTTTTATAAC
AGCAAGACGGTATCACCAATTATCATGAAGCATCCTCAAAAGGATTTTTCAGTCATTCGCTACAATGAACCTCCCTCTGC
AGATAAAGGTCATTTTGTAAATCCACCCGATATTGAATTTACTGGTATTGATCAGGAAGAGTTGGATTTTTTCCACCGAA
GTTTAAATAAAGCACTTTATTCAGCGGATAATTTCTATGCTCATGAGTGGCAAAACGGAGATATCGTCATTGCAGATAAT
TTTTCTTTATTACATGGCAGAGAAGGGTTTGTCTCCAGATCGCCTCGCCATATCCAACGCGTTCATGTTTTGAGTAATCC
GCCTTTTGATAACCCGGGTCTGGAGTCTTATCAATGA

Upstream 100 bases:

>100_bases
GTCTTGCTGAGGCGCTCGGAAGCTGAGGCTTTGGGTGCAAAATTAATTTGTTCCTCTGATGGTCGGCACAGTCATTATCA
ATTAATGGCGGAGGTGTCAT

Downstream 100 bases:

>100_bases
GCGCACAAGTTGCAGACGTTGTAATTGTCGGTGCGGGTCCAGTAGGGCTCATGTGTGCCTATTTGGGACAACGTTGTGGT
ATCCATACCGTGATTGTCGA

Product: pyoverdine biosynthesis protein PvcB

Products: NA

Alternate protein names: Pyoverdine Biosynthesis Protein PvcB; Taurine Catabolism Dioxygenase TauD/TfdA; Pyoverdine Biosynthesis Protein Pvc; Clavaminate Synthase-Like Protein; Siderophore Biosynthesis Protein; PvcB Protein; Pyoverdine Chromophore Biosynthetic Protein PvcB; Pyoverdine Biosynthesis Protein PvcB-Like Protein; Siderophore Biosynthesis-Related Protein

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MNYKVTSLKPFGVLLEPVSEKTKVTDVDIENLRHLFAKNQLVVLRGFCAFQNAEDFSNYCELWGEVSLWPFGKVLELIEQ
EDPEDHIFDHSYMPLHWDGMYRPQVPEYQIFHCVKAPLPGQGGRTTFSNTILALQFASSEIKELWNKVCGTYQRKMEFYN
SKTVSPIIMKHPQKDFSVIRYNEPPSADKGHFVNPPDIEFTGIDQEELDFFHRSLNKALYSADNFYAHEWQNGDIVIADN
FSLLHGREGFVSRSPRHIQRVHVLSNPPFDNPGLESYQ

Sequences:

>Translated_278_residues
MNYKVTSLKPFGVLLEPVSEKTKVTDVDIENLRHLFAKNQLVVLRGFCAFQNAEDFSNYCELWGEVSLWPFGKVLELIEQ
EDPEDHIFDHSYMPLHWDGMYRPQVPEYQIFHCVKAPLPGQGGRTTFSNTILALQFASSEIKELWNKVCGTYQRKMEFYN
SKTVSPIIMKHPQKDFSVIRYNEPPSADKGHFVNPPDIEFTGIDQEELDFFHRSLNKALYSADNFYAHEWQNGDIVIADN
FSLLHGREGFVSRSPRHIQRVHVLSNPPFDNPGLESYQ
>Mature_278_residues
MNYKVTSLKPFGVLLEPVSEKTKVTDVDIENLRHLFAKNQLVVLRGFCAFQNAEDFSNYCELWGEVSLWPFGKVLELIEQ
EDPEDHIFDHSYMPLHWDGMYRPQVPEYQIFHCVKAPLPGQGGRTTFSNTILALQFASSEIKELWNKVCGTYQRKMEFYN
SKTVSPIIMKHPQKDFSVIRYNEPPSADKGHFVNPPDIEFTGIDQEELDFFHRSLNKALYSADNFYAHEWQNGDIVIADN
FSLLHGREGFVSRSPRHIQRVHVLSNPPFDNPGLESYQ

Specific function: Unknown

COG id: COG2175

COG function: function code Q; Probable taurine catabolism dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32205; Mature: 32205

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYKVTSLKPFGVLLEPVSEKTKVTDVDIENLRHLFAKNQLVVLRGFCAFQNAEDFSNYC
CCEEECCCCCCHHHHCCCCCCCEEECCCHHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHH
ELWGEVSLWPFGKVLELIEQEDPEDHIFDHSYMPLHWDGMYRPQVPEYQIFHCVKAPLPG
HHHCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCEEECCCCCCCCCCHHHHHEECCCCCC
QGGRTTFSNTILALQFASSEIKELWNKVCGTYQRKMEFYNSKTVSPIIMKHPQKDFSVIR
CCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEE
YNEPPSADKGHFVNPPDIEFTGIDQEELDFFHRSLNKALYSADNFYAHEWQNGDIVIADN
ECCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECC
FSLLHGREGFVSRSPRHIQRVHVLSNPPFDNPGLESYQ
CCEEECCCCCCCCCCHHHEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MNYKVTSLKPFGVLLEPVSEKTKVTDVDIENLRHLFAKNQLVVLRGFCAFQNAEDFSNYC
CCEEECCCCCCHHHHCCCCCCCEEECCCHHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHH
ELWGEVSLWPFGKVLELIEQEDPEDHIFDHSYMPLHWDGMYRPQVPEYQIFHCVKAPLPG
HHHCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCEEECCCCCCCCCCHHHHHEECCCCCC
QGGRTTFSNTILALQFASSEIKELWNKVCGTYQRKMEFYNSKTVSPIIMKHPQKDFSVIR
CCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEE
YNEPPSADKGHFVNPPDIEFTGIDQEELDFFHRSLNKALYSADNFYAHEWQNGDIVIADN
ECCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECC
FSLLHGREGFVSRSPRHIQRVHVLSNPPFDNPGLESYQ
CCEEECCCCCCCCCCHHHEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA