Click here to switch to the map view.

The map label for this gene is 148358244

Identifier: 148358244

GI number: 148358244

Start: 105782

End: 106372

Strand: Reverse

Name: 148358244

Synonym: LPC_0106

Alternate gene names: NA

Gene position: 106372-105782 (Counterclockwise)

Preceding gene: 148358245

Following gene: 148358242

Centisome position: 2.97

GC content: 37.23

Gene sequence:

>591_bases
ATGCAAGAAAGTTTTGATCCATCAACTATCACTACCCTTCATAAAACGAGCATCATACGTTGGAAAGCCAATGGCATAGA
GTATCAACATAAACAATTCCTTCAACTTGTAGAAGAAAATCATGCTTTTAATTTCCAATTATGGCATGCAGAAGACAAGG
CGCGCCGAAATGATATGGGCTTTGAATTTGTTTACCAGGCCAAAAGAGAAATAGACGCTTTCAATCAGCAAAGAAACAAC
CGCATGGAAGCAATGGATGAGTGGCTGTATAAAGCATTACAGCCTGAAAACCATAATCATTGCCCTGTCAATTCCGAATC
ACCTGGGATGATTATTGACAGATTATCTATTTTATCACTGAAGTCATATCATATGGATTTACAAACCAAACGCCAGGATG
TAGGCGTAGAACATAGAATAGCTTGCACACAAAAACTGGAAATCATACAGCAACAATTAAATCAATTGGCTTTGTGTCTT
GATGAATTACTTAATGAAGTACGAGCTAAAACACGTACGTTCAGAGTTTACCATCAATTTAAGATGTATAACGATCCTAA
GCTAAACCCAGAATTGTACTGTTCTGACTAG

Upstream 100 bases:

>100_bases
TATAGTTCAAAACAGTCGAGTTCAAGTTATGGAAATAGGTATATTTTCATAGACTAAACTCATCTTAAAGTACAATCCAA
ATTAATCTGCAGGATATGAC

Downstream 100 bases:

>100_bases
GTATTAATTGATTTAATGCTGACTCGCTTTTCGAATGAGGAATTGATGGAGAGTCGGGTTGATTTCTTTTGGTTTTGGTT
TTGGTTTCAAATATACCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MQESFDPSTITTLHKTSIIRWKANGIEYQHKQFLQLVEENHAFNFQLWHAEDKARRNDMGFEFVYQAKREIDAFNQQRNN
RMEAMDEWLYKALQPENHNHCPVNSESPGMIIDRLSILSLKSYHMDLQTKRQDVGVEHRIACTQKLEIIQQQLNQLALCL
DELLNEVRAKTRTFRVYHQFKMYNDPKLNPELYCSD

Sequences:

>Translated_196_residues
MQESFDPSTITTLHKTSIIRWKANGIEYQHKQFLQLVEENHAFNFQLWHAEDKARRNDMGFEFVYQAKREIDAFNQQRNN
RMEAMDEWLYKALQPENHNHCPVNSESPGMIIDRLSILSLKSYHMDLQTKRQDVGVEHRIACTQKLEIIQQQLNQLALCL
DELLNEVRAKTRTFRVYHQFKMYNDPKLNPELYCSD
>Mature_196_residues
MQESFDPSTITTLHKTSIIRWKANGIEYQHKQFLQLVEENHAFNFQLWHAEDKARRNDMGFEFVYQAKREIDAFNQQRNN
RMEAMDEWLYKALQPENHNHCPVNSESPGMIIDRLSILSLKSYHMDLQTKRQDVGVEHRIACTQKLEIIQQQLNQLALCL
DELLNEVRAKTRTFRVYHQFKMYNDPKLNPELYCSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23403; Mature: 23403

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQESFDPSTITTLHKTSIIRWKANGIEYQHKQFLQLVEENHAFNFQLWHAEDKARRNDMG
CCCCCCCHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCC
FEFVYQAKREIDAFNQQRNNRMEAMDEWLYKALQPENHNHCPVNSESPGMIIDRLSILSL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
KSYHMDLQTKRQDVGVEHRIACTQKLEIIQQQLNQLALCLDELLNEVRAKTRTFRVYHQF
HHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KMYNDPKLNPELYCSD
HHCCCCCCCCCEEECC
>Mature Secondary Structure
MQESFDPSTITTLHKTSIIRWKANGIEYQHKQFLQLVEENHAFNFQLWHAEDKARRNDMG
CCCCCCCHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCC
FEFVYQAKREIDAFNQQRNNRMEAMDEWLYKALQPENHNHCPVNSESPGMIIDRLSILSL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
KSYHMDLQTKRQDVGVEHRIACTQKLEIIQQQLNQLALCLDELLNEVRAKTRTFRVYHQF
HHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KMYNDPKLNPELYCSD
HHCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA