Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

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The map label for this gene is tchB

Identifier: 148285027

GI number: 148285027

Start: 1828930

End: 1829406

Strand: Direct

Name: tchB

Synonym: OTBS_1896

Alternate gene names: NA

Gene position: 1828930-1829406 (Clockwise)

Preceding gene: 148285026

Following gene: 148285028

Centisome position: 85.98

GC content: 29.35

Gene sequence:

>477_bases
ATGAGTATTAGAATTTTGAGGTTTATGATAGGGTTTATTGCTTTAGTCAAGTTTAGTGATGTATATGCGGTAGAATATGA
GTTAGAAGTTGATAATTTGCTGAAGCTTGAGATTTCTGATAGTGGGCCAACAAGAATTAATCTTAAAGATGAAAAAATCA
ATGATATTTTTATGTATCCTCAAAATGCAGCCGAAGTTGTAGTTCATGAGTCTGGATGTTTGTTTATTGCTCCACGAGAA
GAAGAAAAGAAGCTTTATTTAACAGTAATAGGAGAACACAAAACAATTCAAGATTTAATGTTAACTTTTACTCCAAAAAC
TCCAAGCCATGTAACGCTTATTAATGCTGCTTTGAAAGAAGATGAAAATGATAATTCAAAACAAAACAATAACAATTTGT
TCAGTAATGACGTTAATACAAAAGAATTAACAGCGAAACCTTCTAAAAAACAAAATAGAAATACTAAGAAAAAATAA

Upstream 100 bases:

>100_bases
GTAAACATATAGCTGTCGATAAGACTTACCTTTTGACTTACAAGCGAAGTCCTAATTACCTTTTGTTGTTAACTGGCGTT
AAAGAGAATGGAATAAAAAA

Downstream 100 bases:

>100_bases
AACTGGCTTAAAATGCTAGTTTTTACTTCAAAGATATCAAGCTCTGCATCAAGCCTATTAACACTACTTCAAAGTAAAAT
TTCATTGGTATGGAATAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSIRILRFMIGFIALVKFSDVYAVEYELEVDNLLKLEISDSGPTRINLKDEKINDIFMYPQNAAEVVVHESGCLFIAPRE
EEKKLYLTVIGEHKTIQDLMLTFTPKTPSHVTLINAALKEDENDNSKQNNNNLFSNDVNTKELTAKPSKKQNRNTKKK

Sequences:

>Translated_158_residues
MSIRILRFMIGFIALVKFSDVYAVEYELEVDNLLKLEISDSGPTRINLKDEKINDIFMYPQNAAEVVVHESGCLFIAPRE
EEKKLYLTVIGEHKTIQDLMLTFTPKTPSHVTLINAALKEDENDNSKQNNNNLFSNDVNTKELTAKPSKKQNRNTKKK
>Mature_157_residues
SIRILRFMIGFIALVKFSDVYAVEYELEVDNLLKLEISDSGPTRINLKDEKINDIFMYPQNAAEVVVHESGCLFIAPREE
EKKLYLTVIGEHKTIQDLMLTFTPKTPSHVTLINAALKEDENDNSKQNNNNLFSNDVNTKELTAKPSKKQNRNTKKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18102; Mature: 17971

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRILRFMIGFIALVKFSDVYAVEYELEVDNLLKLEISDSGPTRINLKDEKINDIFMYP
CCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEECC
QNAAEVVVHESGCLFIAPREEEKKLYLTVIGEHKTIQDLMLTFTPKTPSHVTLINAALKE
CCCEEEEEECCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEEHHC
DENDNSKQNNNNLFSNDVNTKELTAKPSKKQNRNTKKK
CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SIRILRFMIGFIALVKFSDVYAVEYELEVDNLLKLEISDSGPTRINLKDEKINDIFMYP
CCHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEECC
QNAAEVVVHESGCLFIAPREEEKKLYLTVIGEHKTIQDLMLTFTPKTPSHVTLINAALKE
CCCEEEEEECCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEEHHC
DENDNSKQNNNNLFSNDVNTKELTAKPSKKQNRNTKKK
CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA