| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is tchB
Identifier: 148285027
GI number: 148285027
Start: 1828930
End: 1829406
Strand: Direct
Name: tchB
Synonym: OTBS_1896
Alternate gene names: NA
Gene position: 1828930-1829406 (Clockwise)
Preceding gene: 148285026
Following gene: 148285028
Centisome position: 85.98
GC content: 29.35
Gene sequence:
>477_bases ATGAGTATTAGAATTTTGAGGTTTATGATAGGGTTTATTGCTTTAGTCAAGTTTAGTGATGTATATGCGGTAGAATATGA GTTAGAAGTTGATAATTTGCTGAAGCTTGAGATTTCTGATAGTGGGCCAACAAGAATTAATCTTAAAGATGAAAAAATCA ATGATATTTTTATGTATCCTCAAAATGCAGCCGAAGTTGTAGTTCATGAGTCTGGATGTTTGTTTATTGCTCCACGAGAA GAAGAAAAGAAGCTTTATTTAACAGTAATAGGAGAACACAAAACAATTCAAGATTTAATGTTAACTTTTACTCCAAAAAC TCCAAGCCATGTAACGCTTATTAATGCTGCTTTGAAAGAAGATGAAAATGATAATTCAAAACAAAACAATAACAATTTGT TCAGTAATGACGTTAATACAAAAGAATTAACAGCGAAACCTTCTAAAAAACAAAATAGAAATACTAAGAAAAAATAA
Upstream 100 bases:
>100_bases GTAAACATATAGCTGTCGATAAGACTTACCTTTTGACTTACAAGCGAAGTCCTAATTACCTTTTGTTGTTAACTGGCGTT AAAGAGAATGGAATAAAAAA
Downstream 100 bases:
>100_bases AACTGGCTTAAAATGCTAGTTTTTACTTCAAAGATATCAAGCTCTGCATCAAGCCTATTAACACTACTTCAAAGTAAAAT TTCATTGGTATGGAATAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSIRILRFMIGFIALVKFSDVYAVEYELEVDNLLKLEISDSGPTRINLKDEKINDIFMYPQNAAEVVVHESGCLFIAPRE EEKKLYLTVIGEHKTIQDLMLTFTPKTPSHVTLINAALKEDENDNSKQNNNNLFSNDVNTKELTAKPSKKQNRNTKKK
Sequences:
>Translated_158_residues MSIRILRFMIGFIALVKFSDVYAVEYELEVDNLLKLEISDSGPTRINLKDEKINDIFMYPQNAAEVVVHESGCLFIAPRE EEKKLYLTVIGEHKTIQDLMLTFTPKTPSHVTLINAALKEDENDNSKQNNNNLFSNDVNTKELTAKPSKKQNRNTKKK >Mature_157_residues SIRILRFMIGFIALVKFSDVYAVEYELEVDNLLKLEISDSGPTRINLKDEKINDIFMYPQNAAEVVVHESGCLFIAPREE EKKLYLTVIGEHKTIQDLMLTFTPKTPSHVTLINAALKEDENDNSKQNNNNLFSNDVNTKELTAKPSKKQNRNTKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18102; Mature: 17971
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRILRFMIGFIALVKFSDVYAVEYELEVDNLLKLEISDSGPTRINLKDEKINDIFMYP CCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEECC QNAAEVVVHESGCLFIAPREEEKKLYLTVIGEHKTIQDLMLTFTPKTPSHVTLINAALKE CCCEEEEEECCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEEHHC DENDNSKQNNNNLFSNDVNTKELTAKPSKKQNRNTKKK CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC >Mature Secondary Structure SIRILRFMIGFIALVKFSDVYAVEYELEVDNLLKLEISDSGPTRINLKDEKINDIFMYP CCHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEECC QNAAEVVVHESGCLFIAPREEEKKLYLTVIGEHKTIQDLMLTFTPKTPSHVTLINAALKE CCCEEEEEECCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEEHHC DENDNSKQNNNNLFSNDVNTKELTAKPSKKQNRNTKKK CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA