| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148284963
Identifier: 148284963
GI number: 148284963
Start: 1715923
End: 1716513
Strand: Direct
Name: 148284963
Synonym: OTBS_1769
Alternate gene names: NA
Gene position: 1715923-1716513 (Clockwise)
Preceding gene: 148284962
Following gene: 148284964
Centisome position: 80.67
GC content: 24.7
Gene sequence:
>591_bases ATGATTATGATACAGCTAAAACGGAATATTATTATTTTCTTGTTTTTTATATGTAGTACTATTCCTGCTTATGCTACACA AGATGTGAAAGAATATATCGATAGTGTAATGCAAGAAACAGTATCTATAATAAAAGGTCAGTTTTCACAACAAGAAAATA AAAGTATACAATTGAGATTATTATTAGAGAAAAAATTTGATCTTAACTCAATGGTAAGCTCAATGTTAGGTAGAAACAAA GTTAAACTGTCTAATGATCAAATAGATGAGTTTAATAAAATATGTAAGGATTATATATTAACATATTGCAGTAGAATGCT TGCAAGTTATAATATTGGTAATATTAATATTAGAATGGTATCGCCTAATGGGCCTTTGTGCTATATGGTAAGAACTGATA TCATACAGCAGAATAATCAAGTATTAAAGGTTGATTTTTTAGTTAAGAAATTAGATCATGAATATAAAATCGTAAATATA ATAATTGAAGGAATAAGTTTTATTACTACTCATTCTGTTGAAATAACAAATGTTATTAGAGATAAAGGTTTTGATTATTT AATTAATAGTTTAAGGGATAAAAGTATATAA
Upstream 100 bases:
>100_bases TCATGAAAAACTCAATAGATCCTTATTCTGTATATAGAAATATTTCATATCAAACATCAGATTATTTTCAAAAATGTCGA ACTAATAAAATTTCTAAGAA
Downstream 100 bases:
>100_bases AGTAAGATTTAAAAATTAAGTAAAATTTTGGTTTTTCCTGGTAATTTAGCCGATGAAAGTATATCTATTTATATTCATTG GCCTTTTTGTTTGTCAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Luene Tolerance Family Protein; Aspartate Aminotransferase
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MIMIQLKRNIIIFLFFICSTIPAYATQDVKEYIDSVMQETVSIIKGQFSQQENKSIQLRLLLEKKFDLNSMVSSMLGRNK VKLSNDQIDEFNKICKDYILTYCSRMLASYNIGNINIRMVSPNGPLCYMVRTDIIQQNNQVLKVDFLVKKLDHEYKIVNI IIEGISFITTHSVEITNVIRDKGFDYLINSLRDKSI
Sequences:
>Translated_196_residues MIMIQLKRNIIIFLFFICSTIPAYATQDVKEYIDSVMQETVSIIKGQFSQQENKSIQLRLLLEKKFDLNSMVSSMLGRNK VKLSNDQIDEFNKICKDYILTYCSRMLASYNIGNINIRMVSPNGPLCYMVRTDIIQQNNQVLKVDFLVKKLDHEYKIVNI IIEGISFITTHSVEITNVIRDKGFDYLINSLRDKSI >Mature_196_residues MIMIQLKRNIIIFLFFICSTIPAYATQDVKEYIDSVMQETVSIIKGQFSQQENKSIQLRLLLEKKFDLNSMVSSMLGRNK VKLSNDQIDEFNKICKDYILTYCSRMLASYNIGNINIRMVSPNGPLCYMVRTDIIQQNNQVLKVDFLVKKLDHEYKIVNI IIEGISFITTHSVEITNVIRDKGFDYLINSLRDKSI
Specific function: Unknown
COG id: COG2854
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22763; Mature: 22763
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMIQLKRNIIIFLFFICSTIPAYATQDVKEYIDSVMQETVSIIKGQFSQQENKSIQLRL CEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE LLEKKFDLNSMVSSMLGRNKVKLSNDQIDEFNKICKDYILTYCSRMLASYNIGNINIRMV EEECCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE SPNGPLCYMVRTDIIQQNNQVLKVDFLVKKLDHEYKIVNIIIEGISFITTHSVEITNVIR CCCCCEEEEEEHHHHHCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHH DKGFDYLINSLRDKSI HCCHHHHHHHHHCCCC >Mature Secondary Structure MIMIQLKRNIIIFLFFICSTIPAYATQDVKEYIDSVMQETVSIIKGQFSQQENKSIQLRL CEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE LLEKKFDLNSMVSSMLGRNKVKLSNDQIDEFNKICKDYILTYCSRMLASYNIGNINIRMV EEECCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE SPNGPLCYMVRTDIIQQNNQVLKVDFLVKKLDHEYKIVNIIIEGISFITTHSVEITNVIR CCCCCEEEEEEHHHHHCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHH DKGFDYLINSLRDKSI HCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA