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The map label for this gene is vacJ [C]

Identifier: 148284962

GI number: 148284962

Start: 1715093

End: 1715926

Strand: Direct

Name: vacJ [C]

Synonym: OTBS_1768

Alternate gene names: 148284962

Gene position: 1715093-1715926 (Clockwise)

Preceding gene: 148284961

Following gene: 148284963

Centisome position: 80.63

GC content: 27.46

Gene sequence:

>834_bases
ATGCGTATTATAGTTGCTATAATCATTACATGTACTACTGCTTTAATGATAAAAGCTGATACTTTATCTATTAAAAATAG
TGATAACTATAAGTATACAGAAAACATCAAAGAGATCGGAGATAGCTATTACTCAGATATATCAGATATAGATGAAGATT
TTTGTTTAAAAGCTTTTGATCCATTAGAAAGGATTAATAGAAAAATCTTTTATTTGAACTTGTTTCTTGATTACCTTATT
TTAAGGCCAATAGCTAACTGTTACTATAAAGTAACAAACAATGATGTAAAAGAGGCGGTAGAAAATCTTATTAACAACAC
TGCTGTGCCAGTTACAGTTATAAATAGTGTATTACAATTTAAATTTAAGAATTCTATAGTTAGTGTATGGCAATTTATAG
TAAATACAATTTTAGGTATTGGAGGTTTACATAATATTGCAGCAGAATTTGGCTTGCAGTCTCAACAACTAAATTTTAGC
AGTACATTAGCTAGATATGGCGTTAAGTCTGGTCCGTATATTATTTTACCAATTTTTGGTGGCATGAATTTGAGAGATAT
CAGTAATATAGCATTTGCTCAGTTAAGTCCATTACAGTACATTATTGATAAAACTCATGCCGACAAATTAATTAATACAG
ATATTTTATTTAATAAGAAATTTGCTAAAGGAGTTAAAATCATTGACATGGTACATAAAAGAGCTAAATTGTTCGGTAAT
GCTGAATTTGTCATGAAAAACTCAATAGATCCTTATTCTGTATATAGAAATATTTCATATCAAACATCAGATTATTTTCA
AAAATGTCGAACTAATAAAATTTCTAAGAAATGA

Upstream 100 bases:

>100_bases
ATCAAAATTTATCTTATAGCATTCTAATACTTAGAAAATAGATATCTAAAGTACTTTGCTATTTGTTATCGATTAATGTA
GTCAACAATAAAAATTAATA

Downstream 100 bases:

>100_bases
TTATGATACAGCTAAAACGGAATATTATTATTTTCTTGTTTTTTATATGTAGTACTATTCCTGCTTATGCTACACAAGAT
GTGAAAGAATATATCGATAG

Product: VacJ-like lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MRIIVAIIITCTTALMIKADTLSIKNSDNYKYTENIKEIGDSYYSDISDIDEDFCLKAFDPLERINRKIFYLNLFLDYLI
LRPIANCYYKVTNNDVKEAVENLINNTAVPVTVINSVLQFKFKNSIVSVWQFIVNTILGIGGLHNIAAEFGLQSQQLNFS
STLARYGVKSGPYIILPIFGGMNLRDISNIAFAQLSPLQYIIDKTHADKLINTDILFNKKFAKGVKIIDMVHKRAKLFGN
AEFVMKNSIDPYSVYRNISYQTSDYFQKCRTNKISKK

Sequences:

>Translated_277_residues
MRIIVAIIITCTTALMIKADTLSIKNSDNYKYTENIKEIGDSYYSDISDIDEDFCLKAFDPLERINRKIFYLNLFLDYLI
LRPIANCYYKVTNNDVKEAVENLINNTAVPVTVINSVLQFKFKNSIVSVWQFIVNTILGIGGLHNIAAEFGLQSQQLNFS
STLARYGVKSGPYIILPIFGGMNLRDISNIAFAQLSPLQYIIDKTHADKLINTDILFNKKFAKGVKIIDMVHKRAKLFGN
AEFVMKNSIDPYSVYRNISYQTSDYFQKCRTNKISKK
>Mature_277_residues
MRIIVAIIITCTTALMIKADTLSIKNSDNYKYTENIKEIGDSYYSDISDIDEDFCLKAFDPLERINRKIFYLNLFLDYLI
LRPIANCYYKVTNNDVKEAVENLINNTAVPVTVINSVLQFKFKNSIVSVWQFIVNTILGIGGLHNIAAEFGLQSQQLNFS
STLARYGVKSGPYIILPIFGGMNLRDISNIAFAQLSPLQYIIDKTHADKLINTDILFNKKFAKGVKIIDMVHKRAKLFGN
AEFVMKNSIDPYSVYRNISYQTSDYFQKCRTNKISKK

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=210, Percent_Identity=29.0476190476191, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 31627; Mature: 31627

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIIVAIIITCTTALMIKADTLSIKNSDNYKYTENIKEIGDSYYSDISDIDEDFCLKAFD
CHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
PLERINRKIFYLNLFLDYLILRPIANCYYKVTNNDVKEAVENLINNTAVPVTVINSVLQF
HHHHHCHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHH
KFKNSIVSVWQFIVNTILGIGGLHNIAAEFGLQSQQLNFSSTLARYGVKSGPYIILPIFG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEECCC
GMNLRDISNIAFAQLSPLQYIIDKTHADKLINTDILFNKKFAKGVKIIDMVHKRAKLFGN
CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHEECHHHHHHHHHHHHHHHHHHHHCC
AEFVMKNSIDPYSVYRNISYQTSDYFQKCRTNKISKK
HHEEEECCCCHHHHHHCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRIIVAIIITCTTALMIKADTLSIKNSDNYKYTENIKEIGDSYYSDISDIDEDFCLKAFD
CHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
PLERINRKIFYLNLFLDYLILRPIANCYYKVTNNDVKEAVENLINNTAVPVTVINSVLQF
HHHHHCHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHH
KFKNSIVSVWQFIVNTILGIGGLHNIAAEFGLQSQQLNFSSTLARYGVKSGPYIILPIFG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEECCC
GMNLRDISNIAFAQLSPLQYIIDKTHADKLINTDILFNKKFAKGVKIIDMVHKRAKLFGN
CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHEECHHHHHHHHHHHHHHHHHHHHCC
AEFVMKNSIDPYSVYRNISYQTSDYFQKCRTNKISKK
HHEEEECCCCHHHHHHCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA