Click here to switch to the map view.

The map label for this gene is tpr1B17

Identifier: 148284961

GI number: 148284961

Start: 1713996

End: 1715033

Strand: Direct

Name: tpr1B17

Synonym: OTBS_1767

Alternate gene names: NA

Gene position: 1713996-1715033 (Clockwise)

Preceding gene: 148284959

Following gene: 148284962

Centisome position: 80.58

GC content: 28.03

Gene sequence:

>1038_bases
ATGTCGATTATTAAAACAGCAAGAAATATCATTATAAATAATGCTAACAAACTTAAAGAGGTTTATTTGTTTTTTACTTC
ATTACCATCTTATATAGCTCAAAAAGTCGCTTTAGCTAAACAACATATTCTGGAAATAAAAAGCAAATTTAAAAATCTAG
GCGCTACTAATGTTGACTTAGGTATATACCATCTTCAAAATGGCAATTACAATGAAGCCATTATAAGGTTCAAGATAGTA
TTGATGTTATTAAAAAAATGTTCAGATCAAGCAAACTATTGGTTGTCATTTGCATATTTAATTAAAGGAAATTATAAAAA
ATCATTACGACATGCAAAATTGGTAAATCAACAAGATGTAACTGAATTACGAAATATTTTAGAAAAACCTTACACATTAC
ATTCAGTACCAAGACAAATCTGGAGCATATATAAAAATATTACTTTTGAATATTATAATTCAAGATTTATTGGAAAAGAT
ATCAATGTTGCAAAAGAATTTGTTTATACCTTACTGGAAGTAGTAGAGGAGTTACCACAAGACTGCAAAATACTAGATTA
TGGTTGTGGAAATGGCATTATTGGACATACTATCTGTGAAATGATTGTTAAAGAGTTTACGCTTATAGGAGTAGATTGCT
GTGATATGCTAAATGAAATTGTTAATGCAAAGCATCAGATCTATAATCAAGTTATGTCATTATGGCCACAAGATTTTATT
GAGCAAAATTCTACAAAAGAGCAATTTAATATTGTTATTGCTTTTGCTAGTATTGCCTATAGCATTGATATTAATTCAAT
AATAACAACACTATACCAAGTGTTATTACCAGGAGGATATCTTGGCATAGTATTACCTGCTAACAGAAGTAATACAGTTT
TTGATTTACAATATTTATGGTTTTCTTATAATGTATGCGATGTGGAAAAAAACTTGCAGAATTTTAATGAGCAAGGCCAA
TTCAGTTTAGTAAGAGTAAGGGAGATAAAAATACCAGATCAAAATTTATCTTATAGCATTCTAATACTTAGAAAATAG

Upstream 100 bases:

>100_bases
TACATAATAGTAATATTTAAAGCTATAAATTATTAAATTACATATGCTACCAAGATATAATTGTTATATTTAAGTATACA
TTATTTAAATCAAAAAACAT

Downstream 100 bases:

>100_bases
ATATCTAAAGTACTTTGCTATTTGTTATCGATTAATGTAGTCAACAATAAAAATTAATAATGCGTATTATAGTTGCTATA
ATCATTACATGTACTACTGC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MSIIKTARNIIINNANKLKEVYLFFTSLPSYIAQKVALAKQHILEIKSKFKNLGATNVDLGIYHLQNGNYNEAIIRFKIV
LMLLKKCSDQANYWLSFAYLIKGNYKKSLRHAKLVNQQDVTELRNILEKPYTLHSVPRQIWSIYKNITFEYYNSRFIGKD
INVAKEFVYTLLEVVEELPQDCKILDYGCGNGIIGHTICEMIVKEFTLIGVDCCDMLNEIVNAKHQIYNQVMSLWPQDFI
EQNSTKEQFNIVIAFASIAYSIDINSIITTLYQVLLPGGYLGIVLPANRSNTVFDLQYLWFSYNVCDVEKNLQNFNEQGQ
FSLVRVREIKIPDQNLSYSILILRK

Sequences:

>Translated_345_residues
MSIIKTARNIIINNANKLKEVYLFFTSLPSYIAQKVALAKQHILEIKSKFKNLGATNVDLGIYHLQNGNYNEAIIRFKIV
LMLLKKCSDQANYWLSFAYLIKGNYKKSLRHAKLVNQQDVTELRNILEKPYTLHSVPRQIWSIYKNITFEYYNSRFIGKD
INVAKEFVYTLLEVVEELPQDCKILDYGCGNGIIGHTICEMIVKEFTLIGVDCCDMLNEIVNAKHQIYNQVMSLWPQDFI
EQNSTKEQFNIVIAFASIAYSIDINSIITTLYQVLLPGGYLGIVLPANRSNTVFDLQYLWFSYNVCDVEKNLQNFNEQGQ
FSLVRVREIKIPDQNLSYSILILRK
>Mature_344_residues
SIIKTARNIIINNANKLKEVYLFFTSLPSYIAQKVALAKQHILEIKSKFKNLGATNVDLGIYHLQNGNYNEAIIRFKIVL
MLLKKCSDQANYWLSFAYLIKGNYKKSLRHAKLVNQQDVTELRNILEKPYTLHSVPRQIWSIYKNITFEYYNSRFIGKDI
NVAKEFVYTLLEVVEELPQDCKILDYGCGNGIIGHTICEMIVKEFTLIGVDCCDMLNEIVNAKHQIYNQVMSLWPQDFIE
QNSTKEQFNIVIAFASIAYSIDINSIITTLYQVLLPGGYLGIVLPANRSNTVFDLQYLWFSYNVCDVEKNLQNFNEQGQF
SLVRVREIKIPDQNLSYSILILRK

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39917; Mature: 39786

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIIKTARNIIINNANKLKEVYLFFTSLPSYIAQKVALAKQHILEIKSKFKNLGATNVDL
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
GIYHLQNGNYNEAIIRFKIVLMLLKKCSDQANYWLSFAYLIKGNYKKSLRHAKLVNQQDV
EEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHH
TELRNILEKPYTLHSVPRQIWSIYKNITFEYYNSRFIGKDINVAKEFVYTLLEVVEELPQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCEECCCCHHHHHHHHHHHHHHHHHCCC
DCKILDYGCGNGIIGHTICEMIVKEFTLIGVDCCDMLNEIVNAKHQIYNQVMSLWPQDFI
CCEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
EQNSTKEQFNIVIAFASIAYSIDINSIITTLYQVLLPGGYLGIVLPANRSNTVFDLQYLW
HCCCCHHHHEEEEEEEHHHEEEEHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEE
FSYNVCDVEKNLQNFNEQGQFSLVRVREIKIPDQNLSYSILILRK
EECCHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEC
>Mature Secondary Structure 
SIIKTARNIIINNANKLKEVYLFFTSLPSYIAQKVALAKQHILEIKSKFKNLGATNVDL
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
GIYHLQNGNYNEAIIRFKIVLMLLKKCSDQANYWLSFAYLIKGNYKKSLRHAKLVNQQDV
EEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHH
TELRNILEKPYTLHSVPRQIWSIYKNITFEYYNSRFIGKDINVAKEFVYTLLEVVEELPQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCEECCCCHHHHHHHHHHHHHHHHHCCC
DCKILDYGCGNGIIGHTICEMIVKEFTLIGVDCCDMLNEIVNAKHQIYNQVMSLWPQDFI
CCEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
EQNSTKEQFNIVIAFASIAYSIDINSIITTLYQVLLPGGYLGIVLPANRSNTVFDLQYLW
HCCCCHHHHEEEEEEEHHHEEEEHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEE
FSYNVCDVEKNLQNFNEQGQFSLVRVREIKIPDQNLSYSILILRK
EECCHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]