| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is ubiG [H]
Identifier: 148284890
GI number: 148284890
Start: 1591589
End: 1592329
Strand: Direct
Name: ubiG [H]
Synonym: OTBS_1641
Alternate gene names: 148284890
Gene position: 1591589-1592329 (Clockwise)
Preceding gene: 148284888
Following gene: 148284892
Centisome position: 74.83
GC content: 26.99
Gene sequence:
>741_bases ATGTATAATAACTCAACAATAGATCAAGATGAAATAGAAAAATTCAATACTATAGCCAACGAATGGTGGAATCCTAATGG AAAGTTTAATCAATTACATTTAATGAATCCAGCTAGAATCAGATTTATTAAGCAAAAAATACTATTACATTATAATTTAA TTGATAGTATAACAAGGCCTTTTCATGGGCTAAAAATTGCTGATATCGGTTGTGGAGGTGGAATAACATCAATACCAATG GCTAAACTAGGCGCTACAGTTACAGGTATTGATGCTAGCTGTAAGAATATAGCAGTAGCAAGAATGCATGCTAATAAAAT AGGAATACAAGTTAATTACATTCATAGTTCGATCGAAGAGTATGCAAAAATTAGCAATGAAAAATATGATGTAGTTTTAT GTTTAGAAGTAATTGAACATGTAAGTAATATTCAGAGTTTTATTTTATATTTAAGTAAAATTTTAAAGCTTGAAGGCATG CTCATCATCTCAACTATTAACAAAACTTTAAAATCTTATGTTTTTGCTATAGGTTTAGCTGAATATTTGTTAAGATATTT ACCAATAGGTACTCATGATTTTAATAAATTTTTAAAACCATCTACTATTAATAACATTTTACTTTCACATAATATGACTT TAAAAGAAATTCAAGGATTATCATATAATCCTATATTGCAGCAATGGCGCTTAACTAATGATATAAGCGTTAATTATATC ATGTATATTACTGCAATTTAA
Upstream 100 bases:
>100_bases ATATAATTATTTTATTTACAGTATTTTTTAAATTAATCTTACTTTAATATAATTGATTCAACTGCATATTCCATATATCA CTTTTTGAATAAAGCTTCTT
Downstream 100 bases:
>100_bases ATTTTAAGCATCTGCAATAACCATTAAAATCATAATATTTATTCTCAAGTATTAAGCCATTTTTGAAGCAAATTGCACAT ACCATTTCTGCTTTATTATA
Product: ubiquinone biosynthesis O-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MYNNSTIDQDEIEKFNTIANEWWNPNGKFNQLHLMNPARIRFIKQKILLHYNLIDSITRPFHGLKIADIGCGGGITSIPM AKLGATVTGIDASCKNIAVARMHANKIGIQVNYIHSSIEEYAKISNEKYDVVLCLEVIEHVSNIQSFILYLSKILKLEGM LIISTINKTLKSYVFAIGLAEYLLRYLPIGTHDFNKFLKPSTINNILLSHNMTLKEIQGLSYNPILQQWRLTNDISVNYI MYITAI
Sequences:
>Translated_246_residues MYNNSTIDQDEIEKFNTIANEWWNPNGKFNQLHLMNPARIRFIKQKILLHYNLIDSITRPFHGLKIADIGCGGGITSIPM AKLGATVTGIDASCKNIAVARMHANKIGIQVNYIHSSIEEYAKISNEKYDVVLCLEVIEHVSNIQSFILYLSKILKLEGM LIISTINKTLKSYVFAIGLAEYLLRYLPIGTHDFNKFLKPSTINNILLSHNMTLKEIQGLSYNPILQQWRLTNDISVNYI MYITAI >Mature_246_residues MYNNSTIDQDEIEKFNTIANEWWNPNGKFNQLHLMNPARIRFIKQKILLHYNLIDSITRPFHGLKIADIGCGGGITSIPM AKLGATVTGIDASCKNIAVARMHANKIGIQVNYIHSSIEEYAKISNEKYDVVLCLEVIEHVSNIQSFILYLSKILKLEGM LIISTINKTLKSYVFAIGLAEYLLRYLPIGTHDFNKFLKPSTINNILLSHNMTLKEIQGLSYNPILQQWRLTNDISVNYI MYITAI
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=248, Percent_Identity=35.0806451612903, Blast_Score=173, Evalue=1e-43, Organism=Escherichia coli, GI1788564, Length=239, Percent_Identity=38.0753138075314, Blast_Score=195, Evalue=2e-51, Organism=Caenorhabditis elegans, GI115533050, Length=242, Percent_Identity=31.404958677686, Blast_Score=138, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6324476, Length=280, Percent_Identity=28.2142857142857, Blast_Score=100, Evalue=4e-22, Organism=Drosophila melanogaster, GI281365311, Length=240, Percent_Identity=32.9166666666667, Blast_Score=136, Evalue=2e-32, Organism=Drosophila melanogaster, GI24585589, Length=206, Percent_Identity=34.9514563106796, Blast_Score=127, Evalue=5e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 27991; Mature: 27991
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNNSTIDQDEIEKFNTIANEWWNPNGKFNQLHLMNPARIRFIKQKILLHYNLIDSITRP CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCC FHGLKIADIGCGGGITSIPMAKLGATVTGIDASCKNIAVARMHANKIGIQVNYIHSSIEE CCCCEEEEECCCCCCCCCCHHHHCCEEECCCCCHHHEEEEEEEHHHHEEEEEHHHHHHHH YAKISNEKYDVVLCLEVIEHVSNIQSFILYLSKILKLEGMLIISTINKTLKSYVFAIGLA HHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHH EYLLRYLPIGTHDFNKFLKPSTINNILLSHNMTLKEIQGLSYNPILQQWRLTNDISVNYI HHHHHHCCCCCCHHHHHCCCCHHHHHHHCCCCHHHHHCCCCCCHHHHHHCCCCCCCEEEE MYITAI EEEEEC >Mature Secondary Structure MYNNSTIDQDEIEKFNTIANEWWNPNGKFNQLHLMNPARIRFIKQKILLHYNLIDSITRP CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCC FHGLKIADIGCGGGITSIPMAKLGATVTGIDASCKNIAVARMHANKIGIQVNYIHSSIEE CCCCEEEEECCCCCCCCCCHHHHCCEEECCCCCHHHEEEEEEEHHHHEEEEEHHHHHHHH YAKISNEKYDVVLCLEVIEHVSNIQSFILYLSKILKLEGMLIISTINKTLKSYVFAIGLA HHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHH EYLLRYLPIGTHDFNKFLKPSTINNILLSHNMTLKEIQGLSYNPILQQWRLTNDISVNYI HHHHHHCCCCCCHHHHHCCCCHHHHHHHCCCCHHHHHCCCCCCHHHHHHCCCCCCCEEEE MYITAI EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA