| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148284854
Identifier: 148284854
GI number: 148284854
Start: 1543600
End: 1544127
Strand: Direct
Name: 148284854
Synonym: OTBS_1581
Alternate gene names: NA
Gene position: 1543600-1544127 (Clockwise)
Preceding gene: 148284853
Following gene: 148284855
Centisome position: 72.57
GC content: 28.6
Gene sequence:
>528_bases ATGAAAAAAATCAATTACGAAGAACTTATTGATCAATCCATGTTAAATGTTGTTAAACAAGCTCTTAAGTTTGCTTCTAC TGCCTGCAATTTAGAAGATAATTATTTTTATATATCATTTTGTACAATATTCCCAGGTGTGAAAATATCTGAGCACTTAA GAGTTAAGTATGTAGAACAAATGACTATTGTGTTACAACATCAGTTTTCAGATTTAGTAATTGAGAGTGACTTTTTTTCA GTTTGTTTAAGTTTTAGTGGTAAAATTGAAAAAATTGTTGTTCCGTGGAAATCAATAATTATGTTTATTGATCCAGAAGC GCAGCTACGAATCAAGCTGTTTTATTATGTAAATAAGTATAAACAGCAGCTTTATAAAAATGTCGATAGTATTGTTGAGG ATAGTAGCAAAGAAAATAAAAATCAATATTGCGATCAGTTAGTAGCTACAAATGAAAAGTTGAAAAATATGAAAGACATA GTAGGAAATAAAGTTGTTAGTCTTGACAGCTTTAGGAAGAAGATCTAG
Upstream 100 bases:
>100_bases TTATAGACATTTGATGAGCGTTACTCTATAATAATATAATTCATAAGTCTGATAAGTAAATTTAAATAAGATATTAAACT TAGAGTCTTGGTAAATAACA
Downstream 100 bases:
>100_bases TGACTAACTATGCTTGCTCTATCACTAACAACATTCCAGTTAAGATATATACAGATGGCGCATGTAGCCATAATCCAGGG CCAGGAGGTTGGGGAGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MKKINYEELIDQSMLNVVKQALKFASTACNLEDNYFYISFCTIFPGVKISEHLRVKYVEQMTIVLQHQFSDLVIESDFFS VCLSFSGKIEKIVVPWKSIIMFIDPEAQLRIKLFYYVNKYKQQLYKNVDSIVEDSSKENKNQYCDQLVATNEKLKNMKDI VGNKVVSLDSFRKKI
Sequences:
>Translated_175_residues MKKINYEELIDQSMLNVVKQALKFASTACNLEDNYFYISFCTIFPGVKISEHLRVKYVEQMTIVLQHQFSDLVIESDFFS VCLSFSGKIEKIVVPWKSIIMFIDPEAQLRIKLFYYVNKYKQQLYKNVDSIVEDSSKENKNQYCDQLVATNEKLKNMKDI VGNKVVSLDSFRKKI >Mature_175_residues MKKINYEELIDQSMLNVVKQALKFASTACNLEDNYFYISFCTIFPGVKISEHLRVKYVEQMTIVLQHQFSDLVIESDFFS VCLSFSGKIEKIVVPWKSIIMFIDPEAQLRIKLFYYVNKYKQQLYKNVDSIVEDSSKENKNQYCDQLVATNEKLKNMKDI VGNKVVSLDSFRKKI
Specific function: Unknown
COG id: COG3814
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20511; Mature: 20511
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKINYEELIDQSMLNVVKQALKFASTACNLEDNYFYISFCTIFPGVKISEHLRVKYVEQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHH MTIVLQHQFSDLVIESDFFSVCLSFSGKIEKIVVPWKSIIMFIDPEAQLRIKLFYYVNKY HHHHHHHHHHHHEEHHHHHHHHHHCCCCEEEEEECHHHEEEEECCCCCEEEHHHHHHHHH KQQLYKNVDSIVEDSSKENKNQYCDQLVATNEKLKNMKDIVGNKVVSLDSFRKKI HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHCC >Mature Secondary Structure MKKINYEELIDQSMLNVVKQALKFASTACNLEDNYFYISFCTIFPGVKISEHLRVKYVEQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHH MTIVLQHQFSDLVIESDFFSVCLSFSGKIEKIVVPWKSIIMFIDPEAQLRIKLFYYVNKY HHHHHHHHHHHHEEHHHHHHHHHHCCCCEEEEEECHHHEEEEECCCCCEEEHHHHHHHHH KQQLYKNVDSIVEDSSKENKNQYCDQLVATNEKLKNMKDIVGNKVVSLDSFRKKI HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA