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The map label for this gene is ccmC [H]

Identifier: 148284851

GI number: 148284851

Start: 1541475

End: 1542185

Strand: Direct

Name: ccmC [H]

Synonym: OTBS_1577

Alternate gene names: 148284851

Gene position: 1541475-1542185 (Clockwise)

Preceding gene: 148284850

Following gene: 148284852

Centisome position: 72.47

GC content: 29.11

Gene sequence:

>711_bases
ATGCTTAAGTTACTTAATCCTAAAGTTTTTTTACAGTTATCACGACAAATATTGCCTTATTTGATAGTTATATTTGTAGC
TATTTTTAGCTATGGTATTTATTTATCTCTTTTTAATTCTCCAATTGATTATCAGCAGGGAGAGTTAGTAAGAATAATGT
ATATACATGTTCCATCAGCATGGTTAGCAGTAATGATATATGTTATAATGGCTATATGCAGCTTTGGATCAATAGTTTGG
AAGATTAGAATGTTATATATAATTGCTATATCAGCAGCTCCTATAGGTTGTTGTTTTACAGCAATTACGTTGATTACTGG
ATCAATTTGGGGAAAAATGACTTGGGGGACTTGGTGGGTATGGGATGCTAGATTAACATCAACACTAGTATTGTTATTAT
TATATCTAAGTTATATTATAGTAGTAAATGCTGGAGATAATATATTACGCTGTGAAAAACCAGCTGCAGTGACTTCTTTA
ATTGGAGTTATTAATATACCTATCGTTAAATTTTCAGTTAACATTTGGAGTACGCTACATCAACAATCTAGCGTTCTAAA
AATTGGAGGACCTGCTATTCATATTTCAATGTTAAAACCTCTGATAGTAATGTTCTTAGCATTTGTAATTTATTTTATTA
TTGTAATTATTTGTAGAGTAAATATACTATTTATTCGATTAAAGTTATTTAATTCTATGAGCTTTAGGTAA

Upstream 100 bases:

>100_bases
GTTTATCAAGATAATACTTACTCGTTACCAAAATTGTATCCAAGCTATAGACGTGATCGTCATATAAATTACCATATATT
ATCTACTATAGTGATCAATA

Downstream 100 bases:

>100_bases
TAGTTATGACTTACGTTGTTACAGATTCTTGTGTAAAATGCAAGTATACTGATTGTGTAGAAGTCTGTCCTGTAGACTGC
TTTCATGAAGGAGAAATGAT

Product: heme exporter protein C

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CycZ [H]

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MLKLLNPKVFLQLSRQILPYLIVIFVAIFSYGIYLSLFNSPIDYQQGELVRIMYIHVPSAWLAVMIYVIMAICSFGSIVW
KIRMLYIIAISAAPIGCCFTAITLITGSIWGKMTWGTWWVWDARLTSTLVLLLLYLSYIIVVNAGDNILRCEKPAAVTSL
IGVINIPIVKFSVNIWSTLHQQSSVLKIGGPAIHISMLKPLIVMFLAFVIYFIIVIICRVNILFIRLKLFNSMSFR

Sequences:

>Translated_236_residues
MLKLLNPKVFLQLSRQILPYLIVIFVAIFSYGIYLSLFNSPIDYQQGELVRIMYIHVPSAWLAVMIYVIMAICSFGSIVW
KIRMLYIIAISAAPIGCCFTAITLITGSIWGKMTWGTWWVWDARLTSTLVLLLLYLSYIIVVNAGDNILRCEKPAAVTSL
IGVINIPIVKFSVNIWSTLHQQSSVLKIGGPAIHISMLKPLIVMFLAFVIYFIIVIICRVNILFIRLKLFNSMSFR
>Mature_236_residues
MLKLLNPKVFLQLSRQILPYLIVIFVAIFSYGIYLSLFNSPIDYQQGELVRIMYIHVPSAWLAVMIYVIMAICSFGSIVW
KIRMLYIIAISAAPIGCCFTAITLITGSIWGKMTWGTWWVWDARLTSTLVLLLLYLSYIIVVNAGDNILRCEKPAAVTSL
IGVINIPIVKFSVNIWSTLHQQSSVLKIGGPAIHISMLKPLIVMFLAFVIYFIIVIICRVNILFIRLKLFNSMSFR

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=226, Percent_Identity=38.4955752212389, Blast_Score=160, Evalue=5e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 26800; Mature: 26800

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLLNPKVFLQLSRQILPYLIVIFVAIFSYGIYLSLFNSPIDYQQGELVRIMYIHVPSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCHH
WLAVMIYVIMAICSFGSIVWKIRMLYIIAISAAPIGCCFTAITLITGSIWGKMTWGTWWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEE
WDARLTSTLVLLLLYLSYIIVVNAGDNILRCEKPAAVTSLIGVINIPIVKFSVNIWSTLH
EHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCCHHHHHHHHHHHCCCEEEEHHHHHHHH
QQSSVLKIGGPAIHISMLKPLIVMFLAFVIYFIIVIICRVNILFIRLKLFNSMSFR
HCCCEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLKLLNPKVFLQLSRQILPYLIVIFVAIFSYGIYLSLFNSPIDYQQGELVRIMYIHVPSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCHH
WLAVMIYVIMAICSFGSIVWKIRMLYIIAISAAPIGCCFTAITLITGSIWGKMTWGTWWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEE
WDARLTSTLVLLLLYLSYIIVVNAGDNILRCEKPAAVTSLIGVINIPIVKFSVNIWSTLH
EHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCCHHHHHHHHHHHCCCEEEEHHHHHHHH
QQSSVLKIGGPAIHISMLKPLIVMFLAFVIYFIIVIICRVNILFIRLKLFNSMSFR
HCCCEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1850420; 12597275 [H]