Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

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The map label for this gene is 148284835

Identifier: 148284835

GI number: 148284835

Start: 1505209

End: 1507800

Strand: Direct

Name: 148284835

Synonym: OTBS_1545

Alternate gene names: NA

Gene position: 1505209-1507800 (Clockwise)

Preceding gene: 148284834

Following gene: 148284836

Centisome position: 70.77

GC content: 26.93

Gene sequence:

>2592_bases
ATGTCTAAAAGAAAAAATGAAAATCAGATTTCTAGTACAAGTAATGACAATTTATATAAAAAAAGGAAGTATGATGAAAA
AGAGACCTCCATAACAAAGAATACTAATCTACAAAAGAAAAGAAAGTATGATGAAGACCAGAGTTCAGTAACAAATGATG
ACAATATACAAAGTATTAGTTCTCATAAAAAACAACGTACACAACAAAGTAATTTACTAGATGAGAATATATTTAAAGAT
TGGTTTATGGTATCACTTAAACACATCGCTTCAACCAATATCATTATTCGCTTATGGATAAATCAAAGTACTATAAATCA
AATAAGCAATTTATTTAATCATTCTGCTGATATATTACGCGACTGGCGTAAACTGAAAAATAGTATAAATGATAAAATAC
TAACGTTGCGGTTGCCTGAATCTATAACTCAACAATTGGTAAATATCAATAAATTCATAGGAACAGAGCTATATAAGTGG
ATAAAATATCATGATAACGATGTTCTTTACAATGACAAATCTGAGTATTTAGCAATAAATTACATCTATAATATAGAATG
GACTCCAAGAGGAACAATTAACTATCTACAAACAGCTAGGAATATTTTAGCAAGAAATGATAATGGTTTGAGTAATGATC
AAAAATATCGACTTGCTTGTAATTATTGTTTAGAGGATAGTATTACAAATTATGATCAAAAAGTTAATCTAGCAAGTTAT
TTACAAAACATTAGCGTTTATAGCCAGCCTATGGTTTATTTTTGGACTTCTCATACGTACTCTACTAATATTGATAGTGC
AGCTATTGATATAAAGACAATTGATGCATTAGTGAGTGATTATAATAATCGCAATAGAACCAACATAGACACAAATACTT
ATATATTCAATATACTTGTTGAGGATAACTGTCATAAAGCCATGAATTGTGTGCCAATAGAGTACATTTGGAATAGACTT
AGTTATGAAGAAAAATTAAAAAAGATAACATTAGCAATAAACAAAATAAATAATCGAGAGTTTAGATCTTTATTATTATC
TCAACTTAATTACGAACAGCAGAAAAAAATTCTTCAGAATTCTTACTTTTTAAGTGTTACACTAACAAGTTTTTTGAATG
ATTTATTATTGAGTGATTACTTCTTACCTATAGCATATAATGCATTAAATATCATGCAAGAAGAATCGTTCTTGTACTTA
ATAAAAGCAGTAGTTAATAGAATTGGTTCAAGCTTGTATTCAAAAATTTATGATGATAATCATTATAAATTTATATTCAA
GGAATTATGGCAGTTTGCTCCAAAGCGGTTAAAGGAACATGTACTTGAATGCAATGATACATACATAATACAAAATTTTA
TTGTATTCAAGTTATTTTTGAATGATGAGATTAATAATGATATAGATATAGCAAAGTTAGTATTAGCTGACGCAAATGTT
ACGCACAAATATAATATAATGTTTTGCGGCTCACTGCAATGCGGAGTTAAGAAATGCAGTGATTTAATTATCAAGAACCA
ATGGAATTTTTTAGATACATTTATTAAGCTGCTTATATCGTCTACAGAAGATATAAAAACGCTTAAACAAGAACTTATAA
AAGATCATGGATATCAGATAACAATACATTTTTATCAAAAGCAAGAATATGATAAAGCTGAACATTTTCTCAAGTGGTGT
CTAGAATCAGATGAAAAAATAAAAACTTTCAAAAAAGAATTAGCAAGCAAGGAATTTTCTTGCAAAATATTAGAGTCGAT
TGTTACAAGCAATAAAGCTGATTTTATAGAGATAGAACACTATTTTCAGTGGTGCGCTTCAAATGATTTAAAAATAATTA
ATGAGTTAAAGGAATCAATTCCACAAAAATGGTTTCAGGAAGTAATTTTTAAATTAATAGAACAAGATCAGTATAAATTA
TTAGACCAAATTTTAAATTGGTGTTTTTCAAATGATCAAGAAAAAATTGATAATTGTAAAAATAGTTTCTATACAACAAA
GGAAAGCAATTCATATTGTTGTTTTAGCTACCTAATTTATAGATTAATAGAGAAAGATGATTCATTTCAATTATTAGATA
AATTTGTTAAGTGGTGTTTTACTGACATACAAAAAATAAATCATTTTAAAAAATGGATACTTTGTCCTCAAGATGGTATC
TATAGTCTTTGCACATATCAATTGCAGAAATATAAATTTGAATTAGCTGATAAAAGTGTCGGCTGGGCTGCAATGTCTCA
TGAAGAAATTGATCTATTTAAAAATAAGTTCATGGTTGCTAAAGAGATTGAATATATTTTGGATGATTATATGGAAGAGC
CAGATAAATTACAATCTCTAATCAAATGGTTTAGTCCATCAATAGAAATAATAAAAAAGTTTAAAGAGATAATCCTTAAT
ATGCATTATAATAGCGATTTTAGTGAATCGTTAGATAGATATTTACAAGAATGTGAGAATGTAGACCATAACATAAAGAA
TGATGTTAATGATACTATGGAAAAATTGCTACTTAATGTGGAAAACATTACTTCTAATAATCAGTCAGCAATGAATACTA
TAGGAGAATTAGCTTTTAATATTCAGATTTAG

Upstream 100 bases:

>100_bases
TGATAGCTAAACTATTACAACCTAAACAGGTATTTATAATGAATAGCAAAATAGTAGATATTATGGTAATATCTCGATAA
ATCTTTTTTGAGAAGGAAGC

Downstream 100 bases:

>100_bases
TGTAATAGTAATACAAAATTAAAATATATCAAAAATGGGTAATAAATCAGAGTTAATTGAGATTTTTTTAAATGACTATA
ACCACTTTGAAAAGTCGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 863; Mature: 862

Protein sequence:

>863_residues
MSKRKNENQISSTSNDNLYKKRKYDEKETSITKNTNLQKKRKYDEDQSSVTNDDNIQSISSHKKQRTQQSNLLDENIFKD
WFMVSLKHIASTNIIIRLWINQSTINQISNLFNHSADILRDWRKLKNSINDKILTLRLPESITQQLVNINKFIGTELYKW
IKYHDNDVLYNDKSEYLAINYIYNIEWTPRGTINYLQTARNILARNDNGLSNDQKYRLACNYCLEDSITNYDQKVNLASY
LQNISVYSQPMVYFWTSHTYSTNIDSAAIDIKTIDALVSDYNNRNRTNIDTNTYIFNILVEDNCHKAMNCVPIEYIWNRL
SYEEKLKKITLAINKINNREFRSLLLSQLNYEQQKKILQNSYFLSVTLTSFLNDLLLSDYFLPIAYNALNIMQEESFLYL
IKAVVNRIGSSLYSKIYDDNHYKFIFKELWQFAPKRLKEHVLECNDTYIIQNFIVFKLFLNDEINNDIDIAKLVLADANV
THKYNIMFCGSLQCGVKKCSDLIIKNQWNFLDTFIKLLISSTEDIKTLKQELIKDHGYQITIHFYQKQEYDKAEHFLKWC
LESDEKIKTFKKELASKEFSCKILESIVTSNKADFIEIEHYFQWCASNDLKIINELKESIPQKWFQEVIFKLIEQDQYKL
LDQILNWCFSNDQEKIDNCKNSFYTTKESNSYCCFSYLIYRLIEKDDSFQLLDKFVKWCFTDIQKINHFKKWILCPQDGI
YSLCTYQLQKYKFELADKSVGWAAMSHEEIDLFKNKFMVAKEIEYILDDYMEEPDKLQSLIKWFSPSIEIIKKFKEIILN
MHYNSDFSESLDRYLQECENVDHNIKNDVNDTMEKLLLNVENITSNNQSAMNTIGELAFNIQI

Sequences:

>Translated_863_residues
MSKRKNENQISSTSNDNLYKKRKYDEKETSITKNTNLQKKRKYDEDQSSVTNDDNIQSISSHKKQRTQQSNLLDENIFKD
WFMVSLKHIASTNIIIRLWINQSTINQISNLFNHSADILRDWRKLKNSINDKILTLRLPESITQQLVNINKFIGTELYKW
IKYHDNDVLYNDKSEYLAINYIYNIEWTPRGTINYLQTARNILARNDNGLSNDQKYRLACNYCLEDSITNYDQKVNLASY
LQNISVYSQPMVYFWTSHTYSTNIDSAAIDIKTIDALVSDYNNRNRTNIDTNTYIFNILVEDNCHKAMNCVPIEYIWNRL
SYEEKLKKITLAINKINNREFRSLLLSQLNYEQQKKILQNSYFLSVTLTSFLNDLLLSDYFLPIAYNALNIMQEESFLYL
IKAVVNRIGSSLYSKIYDDNHYKFIFKELWQFAPKRLKEHVLECNDTYIIQNFIVFKLFLNDEINNDIDIAKLVLADANV
THKYNIMFCGSLQCGVKKCSDLIIKNQWNFLDTFIKLLISSTEDIKTLKQELIKDHGYQITIHFYQKQEYDKAEHFLKWC
LESDEKIKTFKKELASKEFSCKILESIVTSNKADFIEIEHYFQWCASNDLKIINELKESIPQKWFQEVIFKLIEQDQYKL
LDQILNWCFSNDQEKIDNCKNSFYTTKESNSYCCFSYLIYRLIEKDDSFQLLDKFVKWCFTDIQKINHFKKWILCPQDGI
YSLCTYQLQKYKFELADKSVGWAAMSHEEIDLFKNKFMVAKEIEYILDDYMEEPDKLQSLIKWFSPSIEIIKKFKEIILN
MHYNSDFSESLDRYLQECENVDHNIKNDVNDTMEKLLLNVENITSNNQSAMNTIGELAFNIQI
>Mature_862_residues
SKRKNENQISSTSNDNLYKKRKYDEKETSITKNTNLQKKRKYDEDQSSVTNDDNIQSISSHKKQRTQQSNLLDENIFKDW
FMVSLKHIASTNIIIRLWINQSTINQISNLFNHSADILRDWRKLKNSINDKILTLRLPESITQQLVNINKFIGTELYKWI
KYHDNDVLYNDKSEYLAINYIYNIEWTPRGTINYLQTARNILARNDNGLSNDQKYRLACNYCLEDSITNYDQKVNLASYL
QNISVYSQPMVYFWTSHTYSTNIDSAAIDIKTIDALVSDYNNRNRTNIDTNTYIFNILVEDNCHKAMNCVPIEYIWNRLS
YEEKLKKITLAINKINNREFRSLLLSQLNYEQQKKILQNSYFLSVTLTSFLNDLLLSDYFLPIAYNALNIMQEESFLYLI
KAVVNRIGSSLYSKIYDDNHYKFIFKELWQFAPKRLKEHVLECNDTYIIQNFIVFKLFLNDEINNDIDIAKLVLADANVT
HKYNIMFCGSLQCGVKKCSDLIIKNQWNFLDTFIKLLISSTEDIKTLKQELIKDHGYQITIHFYQKQEYDKAEHFLKWCL
ESDEKIKTFKKELASKEFSCKILESIVTSNKADFIEIEHYFQWCASNDLKIINELKESIPQKWFQEVIFKLIEQDQYKLL
DQILNWCFSNDQEKIDNCKNSFYTTKESNSYCCFSYLIYRLIEKDDSFQLLDKFVKWCFTDIQKINHFKKWILCPQDGIY
SLCTYQLQKYKFELADKSVGWAAMSHEEIDLFKNKFMVAKEIEYILDDYMEEPDKLQSLIKWFSPSIEIIKKFKEIILNM
HYNSDFSESLDRYLQECENVDHNIKNDVNDTMEKLLLNVENITSNNQSAMNTIGELAFNIQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 102505; Mature: 102374

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRKNENQISSTSNDNLYKKRKYDEKETSITKNTNLQKKRKYDEDQSSVTNDDNIQSIS
CCCCCCCCCCCCCCCCCHHHHHCCCHHHHCCCCCCCCHHHHCCCCHHHCCCCCCHHHHHH
SHKKQRTQQSNLLDENIFKDWFMVSLKHIASTNIIIRLWINQSTINQISNLFNHSADILR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCHHHHHH
DWRKLKNSINDKILTLRLPESITQQLVNINKFIGTELYKWIKYHDNDVLYNDKSEYLAIN
HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEE
YIYNIEWTPRGTINYLQTARNILARNDNGLSNDQKYRLACNYCLEDSITNYDQKVNLASY
EEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHCCCCCHHHCCCHHHH
LQNISVYSQPMVYFWTSHTYSTNIDSAAIDIKTIDALVSDYNNRNRTNIDTNTYIFNILV
HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEE
EDNCHKAMNCVPIEYIWNRLSYEEKLKKITLAINKINNREFRSLLLSQLNYEQQKKILQN
ECCCHHHHCCEEHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHC
SYFLSVTLTSFLNDLLLSDYFLPIAYNALNIMQEESFLYLIKAVVNRIGSSLYSKIYDDN
CHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HYKFIFKELWQFAPKRLKEHVLECNDTYIIQNFIVFKLFLNDEINNDIDIAKLVLADANV
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHEECCCCCCCHHHHHHHHCCCCC
THKYNIMFCGSLQCGVKKCSDLIIKNQWNFLDTFIKLLISSTEDIKTLKQELIKDHGYQI
CEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEE
TIHFYQKQEYDKAEHFLKWCLESDEKIKTFKKELASKEFSCKILESIVTSNKADFIEIEH
EEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEHHHH
YFQWCASNDLKIINELKESIPQKWFQEVIFKLIEQDQYKLLDQILNWCFSNDQEKIDNCK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH
NSFYTTKESNSYCCFSYLIYRLIEKDDSFQLLDKFVKWCFTDIQKINHFKKWILCPQDGI
HCCEECCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCH
YSLCTYQLQKYKFELADKSVGWAAMSHEEIDLFKNKFMVAKEIEYILDDYMEEPDKLQSL
HHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IKWFSPSIEIIKKFKEIILNMHYNSDFSESLDRYLQECENVDHNIKNDVNDTMEKLLLNV
HHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHH
ENITSNNQSAMNTIGELAFNIQI
HHHCCCCHHHHHHHHHHHEEECC
>Mature Secondary Structure 
SKRKNENQISSTSNDNLYKKRKYDEKETSITKNTNLQKKRKYDEDQSSVTNDDNIQSIS
CCCCCCCCCCCCCCCCHHHHHCCCHHHHCCCCCCCCHHHHCCCCHHHCCCCCCHHHHHH
SHKKQRTQQSNLLDENIFKDWFMVSLKHIASTNIIIRLWINQSTINQISNLFNHSADILR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCHHHHHH
DWRKLKNSINDKILTLRLPESITQQLVNINKFIGTELYKWIKYHDNDVLYNDKSEYLAIN
HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEE
YIYNIEWTPRGTINYLQTARNILARNDNGLSNDQKYRLACNYCLEDSITNYDQKVNLASY
EEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHCCCCCHHHCCCHHHH
LQNISVYSQPMVYFWTSHTYSTNIDSAAIDIKTIDALVSDYNNRNRTNIDTNTYIFNILV
HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEE
EDNCHKAMNCVPIEYIWNRLSYEEKLKKITLAINKINNREFRSLLLSQLNYEQQKKILQN
ECCCHHHHCCEEHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHC
SYFLSVTLTSFLNDLLLSDYFLPIAYNALNIMQEESFLYLIKAVVNRIGSSLYSKIYDDN
CHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HYKFIFKELWQFAPKRLKEHVLECNDTYIIQNFIVFKLFLNDEINNDIDIAKLVLADANV
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHEECCCCCCCHHHHHHHHCCCCC
THKYNIMFCGSLQCGVKKCSDLIIKNQWNFLDTFIKLLISSTEDIKTLKQELIKDHGYQI
CEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEE
TIHFYQKQEYDKAEHFLKWCLESDEKIKTFKKELASKEFSCKILESIVTSNKADFIEIEH
EEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEHHHH
YFQWCASNDLKIINELKESIPQKWFQEVIFKLIEQDQYKLLDQILNWCFSNDQEKIDNCK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH
NSFYTTKESNSYCCFSYLIYRLIEKDDSFQLLDKFVKWCFTDIQKINHFKKWILCPQDGI
HCCEECCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCH
YSLCTYQLQKYKFELADKSVGWAAMSHEEIDLFKNKFMVAKEIEYILDDYMEEPDKLQSL
HHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IKWFSPSIEIIKKFKEIILNMHYNSDFSESLDRYLQECENVDHNIKNDVNDTMEKLLLNV
HHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHH
ENITSNNQSAMNTIGELAFNIQI
HHHCCCCHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA