| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148284788
Identifier: 148284788
GI number: 148284788
Start: 1417306
End: 1419174
Strand: Direct
Name: 148284788
Synonym: OTBS_1456
Alternate gene names: NA
Gene position: 1417306-1419174 (Clockwise)
Preceding gene: 148284785
Following gene: 148284801
Centisome position: 66.63
GC content: 31.14
Gene sequence:
>1869_bases ATGGCAAATTTTATCCTTGAGTATATAGAAAATGCTCATACAAATATAGAAGCTAAAATTGAACAACAGGAATATGTCCA GCGAAAGTTGTTCATTATGACTCAAACCATAAAAACATCAGACTTTAATATAAAATATGCAATTGCGTACTTAACGCCGT ATGATCAGCAACTTGTAAAACAAAAATTAATAACCAAATTAACTCCACTGTTTAAGGAATATTTTACAAAGTATGGTTGC GTTGAAGAAGTAAGCGAAAGAATGGCTGAATGGCTTATAAATCAAGAATCACAGTCTGATAAACCAAAGCTTATAGCATC AAATTTTGCCAACTTTTTTAACGATAATAAATTACAAAAGACTATTAAAAATAATATAACAAAGCTAACAACAGATACTC AGAATCTGTATAAAGGAATTTTTTGCTTAAAAGTTTTGTCACATATAACACAATCTTCACTACAAAATATAACTTCAGGC GCAATCGATATTTTAAAAACAGAATTAACACAGCGATTTGAAGAAGAATACTTGGTTGAATGTTTTATAGAATGTATAAA ACCATTTATACACAAATTTGCATGTTTTTTTATTATGCGCACTGAAGGAGATGGACATATTGATATGGCAGATGAGTTCT CAGATGTTAATAGTTGTATAGAAGATATTTACAATTTCAAGTTTGATGAATCAGGCAAAAATGCAGTTACAAAAATGAAA TCTGAAATAAATCATCTTATAGAACTAAATCATCTAAATAAGAATTTTTTTACAAGCTTAAGTAGTAAAATGGTTACATT TATAGAAAAACATAAAACACAACAGCCTAATTTCATTGCCATGAAAACAGACATTGAGACTGAAAATGGAAAAAGCAACA GTGACATTCAGTCAATACAATCTGATCAATATTGTGACTTGAGTTATATGGAAGCTGAAACTGAAATTGATACTGAAAGT GAAACTGAAAATGGAAAAAGTAACACTGACATTCAGTTAATGCAATCTGATCAATATTATGATTTGAGTTACATGGAAGC TGAAACTGAAATTGATACTGAAAGTGAAATTGAAAGTGAAAATGGAAAAAGCAATAGTGACATTCAGTCAATACAATCTG ATTTATATTATGACCTAACTGATATAGAAGATCAAATAGAAGTTGACCTGCGAGATGCTGGATTGCTATCTGAAGACAAT CTACCTCAATCTGAAAAATTGTCTGAAAACATTACAGAGCAGCTTAGATTGATACTTGAAAACCAACAACACGACTTAAC TAATAGTAATATTGACAGCGACAATGAGATTATGTTAACAGAAGCTGCAGACTTAGTAATAGACGGACGGGTATTGAAAG ATATTCCTCAACCTGCAAAATTTTCTGAAAACATTACAGAGCAGATTAGATTGACATCTGAAAACCAACAACATGACTTA ACTAATAGTAATATTGACAGCAACAATGAGTTTCTGGTAAGAGAAGCTGAAGACTTGGTAATAGACGTATGGGTATTGGA AGATATTCCTCAATCTGAAAAATGGCCTGAAAACATTACAGAGCTGATTAGATTGACATCTGAAAACCAACAACATGACT TAACTAATAGTAATATTGACAGCGACAATGAGTTTCTGGTAACAGAAGATCAAGACTTGGTAATAGACGTATGGGTATTG GAAGATATTCCTCAACCTGCAAAATTTCCTGAAAACATTACAGAGCTGATTAGATTGACACCTGAAAACCAACAACATGA CTTAACTAATAGTAATATTGACAGCTACAATGAGATTATGTTAACAGAAGCTGAAGAATTGGTATTTGAAAAGCTTCCTA ACCATAATGAAATACCTGACTGGATATAA
Upstream 100 bases:
>100_bases TAAATCAGATCCTAATCTTAACATTTCTTAACTTTTTAGTTGCGTTTTTTAATTATTCATAATATATATAAAAAAACTTT AAACTATAAGGTAACGATAT
Downstream 100 bases:
>100_bases ACTGCTTTTTATTAAGTAAAGATGAAACTAAAATGCTATACCGCATGTAGATCAGCCTGAAGAGTAGTCACTTATTGCGC TATGTTATCAGCACAGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 622; Mature: 621
Protein sequence:
>622_residues MANFILEYIENAHTNIEAKIEQQEYVQRKLFIMTQTIKTSDFNIKYAIAYLTPYDQQLVKQKLITKLTPLFKEYFTKYGC VEEVSERMAEWLINQESQSDKPKLIASNFANFFNDNKLQKTIKNNITKLTTDTQNLYKGIFCLKVLSHITQSSLQNITSG AIDILKTELTQRFEEEYLVECFIECIKPFIHKFACFFIMRTEGDGHIDMADEFSDVNSCIEDIYNFKFDESGKNAVTKMK SEINHLIELNHLNKNFFTSLSSKMVTFIEKHKTQQPNFIAMKTDIETENGKSNSDIQSIQSDQYCDLSYMEAETEIDTES ETENGKSNTDIQLMQSDQYYDLSYMEAETEIDTESEIESENGKSNSDIQSIQSDLYYDLTDIEDQIEVDLRDAGLLSEDN LPQSEKLSENITEQLRLILENQQHDLTNSNIDSDNEIMLTEAADLVIDGRVLKDIPQPAKFSENITEQIRLTSENQQHDL TNSNIDSNNEFLVREAEDLVIDVWVLEDIPQSEKWPENITELIRLTSENQQHDLTNSNIDSDNEFLVTEDQDLVIDVWVL EDIPQPAKFPENITELIRLTPENQQHDLTNSNIDSYNEIMLTEAEELVFEKLPNHNEIPDWI
Sequences:
>Translated_622_residues MANFILEYIENAHTNIEAKIEQQEYVQRKLFIMTQTIKTSDFNIKYAIAYLTPYDQQLVKQKLITKLTPLFKEYFTKYGC VEEVSERMAEWLINQESQSDKPKLIASNFANFFNDNKLQKTIKNNITKLTTDTQNLYKGIFCLKVLSHITQSSLQNITSG AIDILKTELTQRFEEEYLVECFIECIKPFIHKFACFFIMRTEGDGHIDMADEFSDVNSCIEDIYNFKFDESGKNAVTKMK SEINHLIELNHLNKNFFTSLSSKMVTFIEKHKTQQPNFIAMKTDIETENGKSNSDIQSIQSDQYCDLSYMEAETEIDTES ETENGKSNTDIQLMQSDQYYDLSYMEAETEIDTESEIESENGKSNSDIQSIQSDLYYDLTDIEDQIEVDLRDAGLLSEDN LPQSEKLSENITEQLRLILENQQHDLTNSNIDSDNEIMLTEAADLVIDGRVLKDIPQPAKFSENITEQIRLTSENQQHDL TNSNIDSNNEFLVREAEDLVIDVWVLEDIPQSEKWPENITELIRLTSENQQHDLTNSNIDSDNEFLVTEDQDLVIDVWVL EDIPQPAKFPENITELIRLTPENQQHDLTNSNIDSYNEIMLTEAEELVFEKLPNHNEIPDWI >Mature_621_residues ANFILEYIENAHTNIEAKIEQQEYVQRKLFIMTQTIKTSDFNIKYAIAYLTPYDQQLVKQKLITKLTPLFKEYFTKYGCV EEVSERMAEWLINQESQSDKPKLIASNFANFFNDNKLQKTIKNNITKLTTDTQNLYKGIFCLKVLSHITQSSLQNITSGA IDILKTELTQRFEEEYLVECFIECIKPFIHKFACFFIMRTEGDGHIDMADEFSDVNSCIEDIYNFKFDESGKNAVTKMKS EINHLIELNHLNKNFFTSLSSKMVTFIEKHKTQQPNFIAMKTDIETENGKSNSDIQSIQSDQYCDLSYMEAETEIDTESE TENGKSNTDIQLMQSDQYYDLSYMEAETEIDTESEIESENGKSNSDIQSIQSDLYYDLTDIEDQIEVDLRDAGLLSEDNL PQSEKLSENITEQLRLILENQQHDLTNSNIDSDNEIMLTEAADLVIDGRVLKDIPQPAKFSENITEQIRLTSENQQHDLT NSNIDSNNEFLVREAEDLVIDVWVLEDIPQSEKWPENITELIRLTSENQQHDLTNSNIDSDNEFLVTEDQDLVIDVWVLE DIPQPAKFPENITELIRLTPENQQHDLTNSNIDSYNEIMLTEAEELVFEKLPNHNEIPDWI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72124; Mature: 71993
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANFILEYIENAHTNIEAKIEQQEYVQRKLFIMTQTIKTSDFNIKYAIAYLTPYDQQLVK CHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHEEEEECCCCCEEEEEEEECCCHHHHHH QKLITKLTPLFKEYFTKYGCVEEVSERMAEWLINQESQSDKPKLIASNFANFFNDNKLQK HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHH TIKNNITKLTTDTQNLYKGIFCLKVLSHITQSSLQNITSGAIDILKTELTQRFEEEYLVE HHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CFIECIKPFIHKFACFFIMRTEGDGHIDMADEFSDVNSCIEDIYNFKFDESGKNAVTKMK HHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH SEINHLIELNHLNKNFFTSLSSKMVTFIEKHKTQQPNFIAMKTDIETENGKSNSDIQSIQ HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHC SDQYCDLSYMEAETEIDTESETENGKSNTDIQLMQSDQYYDLSYMEAETEIDTESEIESE CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCHHHHHCC NGKSNSDIQSIQSDLYYDLTDIEDQIEVDLRDAGLLSEDNLPQSEKLSENITEQLRLILE CCCCCHHHHHHHHHHCCCCCCCCCHHEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH NQQHDLTNSNIDSDNEIMLTEAADLVIDGRVLKDIPQPAKFSENITEQIRLTSENQQHDL CCCCCCCCCCCCCCCCEEEEECCCCEECCHHHHHCCCCCHHHHHHHHHHEECCCCCCCCC TNSNIDSNNEFLVREAEDLVIDVWVLEDIPQSEKWPENITELIRLTSENQQHDLTNSNID CCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC SDNEFLVTEDQDLVIDVWVLEDIPQPAKFPENITELIRLTPENQQHDLTNSNIDSYNEIM CCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH LTEAEELVFEKLPNHNEIPDWI HHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ANFILEYIENAHTNIEAKIEQQEYVQRKLFIMTQTIKTSDFNIKYAIAYLTPYDQQLVK HHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHEEEEECCCCCEEEEEEEECCCHHHHHH QKLITKLTPLFKEYFTKYGCVEEVSERMAEWLINQESQSDKPKLIASNFANFFNDNKLQK HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHH TIKNNITKLTTDTQNLYKGIFCLKVLSHITQSSLQNITSGAIDILKTELTQRFEEEYLVE HHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CFIECIKPFIHKFACFFIMRTEGDGHIDMADEFSDVNSCIEDIYNFKFDESGKNAVTKMK HHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH SEINHLIELNHLNKNFFTSLSSKMVTFIEKHKTQQPNFIAMKTDIETENGKSNSDIQSIQ HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHC SDQYCDLSYMEAETEIDTESETENGKSNTDIQLMQSDQYYDLSYMEAETEIDTESEIESE CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCHHHHHCC NGKSNSDIQSIQSDLYYDLTDIEDQIEVDLRDAGLLSEDNLPQSEKLSENITEQLRLILE CCCCCHHHHHHHHHHCCCCCCCCCHHEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH NQQHDLTNSNIDSDNEIMLTEAADLVIDGRVLKDIPQPAKFSENITEQIRLTSENQQHDL CCCCCCCCCCCCCCCCEEEEECCCCEECCHHHHHCCCCCHHHHHHHHHHEECCCCCCCCC TNSNIDSNNEFLVREAEDLVIDVWVLEDIPQSEKWPENITELIRLTSENQQHDLTNSNID CCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC SDNEFLVTEDQDLVIDVWVLEDIPQPAKFPENITELIRLTPENQQHDLTNSNIDSYNEIM CCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH LTEAEELVFEKLPNHNEIPDWI HHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA