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The map label for this gene is nagD [C]

Identifier: 148284767

GI number: 148284767

Start: 1381997

End: 1382857

Strand: Direct

Name: nagD [C]

Synonym: OTBS_1420

Alternate gene names: 148284767

Gene position: 1381997-1382857 (Clockwise)

Preceding gene: 148284765

Following gene: 148284768

Centisome position: 64.97

GC content: 27.06

Gene sequence:

>861_bases
ATGTATAAATATGAAACTCCCATTAACTTATCTGATATAGTCAAAAATTATGAAGTCATATTATTTGATATATACGGAGT
ATTGCTAGAGAATAACATTCCGTATACTAAAACAATAGAAGTGGTTAACAATCTATCAAAAAGTATAAAAATATGTTTTG
TATCTAATACTCCTCAGCCAGTTCAGCATTCTAGTAATAGACTTAATACTTATGGAATCAATGCCGCTCCACAAAATGTT
TATACTTCTGGTGAAATAGCTAGAGAAATATTAAAGAATTCAGGTAAAAATCTTAAAATTGATAATCCTATTGTATTTCA
TTTAGGGCCCGACTTTAAAAAAAATGTATTAGAAGATCTCCCTATTAAAACTACTGAAAAAATTCATGATGCTAATATAT
TACTTTTAACAGCATTTGAGGATTATGAAGAAAAGTTAGATCAATATAATTCTATGTTTCAAACTGCTATAACTAACAAA
GCAATATGTCTTTGCGCAAATCCAGATATTATAAATCCATTTGAAAACAAAAATAGATATTGCGCTGGATATTTTAGTGC
TATTTATAAATCTATGGGAGGAAAAGTAGTATATAGCGGTAAACCACATTCAGAAATTTTTCAAGCTGTATTAAATACCT
TAGCACAAAATGTCAAAAAAGAAAAAATACTAATGATAGGGGATACTTTAGAAACAGATATTCTTGGAGCAAATAACATA
GGCATAGATTCAGCTCTAGTGTTAACAGGAAATGCTTTTAGAATAGCTAAAACTTCAAATGTTCCTGATCAAATTAATAT
ACTTAAAAATGCATTTAAACTAAAAAATATTTATCCAAAATACATAATTAACATCATTTAA

Upstream 100 bases:

>100_bases
TAATGGATAACTTAGTGGAAAAACCTATTATGATAACATATAGTATAATCTTTAAGAAGTCAAAAATACTTAAATCAATA
TTACACAGCGAGAAATTAAA

Downstream 100 bases:

>100_bases
CCAGTTTCGGATAATAAAAATGACAGAGAGTAGAGCAAGTAAGTATTTCAGCAATAGTTAAACGCTAAAAAATATAAAAA
AGATAAGAATAAAGAAGTAA

Product: HAD family hydrolase

Products: NA

Alternate protein names: HAD-Superfamily Subfamily IIA Hydrolase; HAD-Superfamily Hydrolase Subfamily IIA; HAD-Superfamily Hydrolase; HAD-Superfamily Subfamily IIA Hydrolase Like Protein; HAD-Superfamily Subfamily IIA Hydrolase TIGR; HAD Superfamily Hydrolase; Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase Domain Protein Hydrolase; Had-Superfamily Subfamily IIa Hydrolase Like Protein; Sugar Phosphatases Of HAD Superfamily; HAD Family Sugar Phosphatase; Haloacid Dehalogenase-Like Family Hydrolase; HAD Superfamily Sugar Phosphatase; Hydrolase Haloacid Dehalogenase-Like Family; Sugar Phosphatase; Hydrolase IIA; HAD-Superfamily Subfamily IIA Hydrolase-Like Protein

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MYKYETPINLSDIVKNYEVILFDIYGVLLENNIPYTKTIEVVNNLSKSIKICFVSNTPQPVQHSSNRLNTYGINAAPQNV
YTSGEIAREILKNSGKNLKIDNPIVFHLGPDFKKNVLEDLPIKTTEKIHDANILLLTAFEDYEEKLDQYNSMFQTAITNK
AICLCANPDIINPFENKNRYCAGYFSAIYKSMGGKVVYSGKPHSEIFQAVLNTLAQNVKKEKILMIGDTLETDILGANNI
GIDSALVLTGNAFRIAKTSNVPDQINILKNAFKLKNIYPKYIINII

Sequences:

>Translated_286_residues
MYKYETPINLSDIVKNYEVILFDIYGVLLENNIPYTKTIEVVNNLSKSIKICFVSNTPQPVQHSSNRLNTYGINAAPQNV
YTSGEIAREILKNSGKNLKIDNPIVFHLGPDFKKNVLEDLPIKTTEKIHDANILLLTAFEDYEEKLDQYNSMFQTAITNK
AICLCANPDIINPFENKNRYCAGYFSAIYKSMGGKVVYSGKPHSEIFQAVLNTLAQNVKKEKILMIGDTLETDILGANNI
GIDSALVLTGNAFRIAKTSNVPDQINILKNAFKLKNIYPKYIINII
>Mature_286_residues
MYKYETPINLSDIVKNYEVILFDIYGVLLENNIPYTKTIEVVNNLSKSIKICFVSNTPQPVQHSSNRLNTYGINAAPQNV
YTSGEIAREILKNSGKNLKIDNPIVFHLGPDFKKNVLEDLPIKTTEKIHDANILLLTAFEDYEEKLDQYNSMFQTAITNK
AICLCANPDIINPFENKNRYCAGYFSAIYKSMGGKVVYSGKPHSEIFQAVLNTLAQNVKKEKILMIGDTLETDILGANNI
GIDSALVLTGNAFRIAKTSNVPDQINILKNAFKLKNIYPKYIINII

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32149; Mature: 32149

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKYETPINLSDIVKNYEVILFDIYGVLLENNIPYTKTIEVVNNLSKSIKICFVSNTPQP
CCCCCCCCCHHHHHCCHHEEEEEEEHHHHCCCCCCHHHHHHHHHHCCEEEEEEECCCCCC
VQHSSNRLNTYGINAAPQNVYTSGEIAREILKNSGKNLKIDNPIVFHLGPDFKKNVLEDL
HHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEECCCEEEEECCCHHHHHHHHC
PIKTTEKIHDANILLLTAFEDYEEKLDQYNSMFQTAITNKAICLCANPDIINPFENKNRY
CCCCHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCE
CAGYFSAIYKSMGGKVVYSGKPHSEIFQAVLNTLAQNVKKEKILMIGDTLETDILGANNI
EHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCC
GIDSALVLTGNAFRIAKTSNVPDQINILKNAFKLKNIYPKYIINII
CCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHEECC
>Mature Secondary Structure
MYKYETPINLSDIVKNYEVILFDIYGVLLENNIPYTKTIEVVNNLSKSIKICFVSNTPQP
CCCCCCCCCHHHHHCCHHEEEEEEEHHHHCCCCCCHHHHHHHHHHCCEEEEEEECCCCCC
VQHSSNRLNTYGINAAPQNVYTSGEIAREILKNSGKNLKIDNPIVFHLGPDFKKNVLEDL
HHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEECCCEEEEECCCHHHHHHHHC
PIKTTEKIHDANILLLTAFEDYEEKLDQYNSMFQTAITNKAICLCANPDIINPFENKNRY
CCCCHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCE
CAGYFSAIYKSMGGKVVYSGKPHSEIFQAVLNTLAQNVKKEKILMIGDTLETDILGANNI
EHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCC
GIDSALVLTGNAFRIAKTSNVPDQINILKNAFKLKNIYPKYIINII
CCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA