| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148284575
Identifier: 148284575
GI number: 148284575
Start: 1015690
End: 1016520
Strand: Direct
Name: 148284575
Synonym: OTBS_1026
Alternate gene names: NA
Gene position: 1015690-1016520 (Clockwise)
Preceding gene: 148284574
Following gene: 148284579
Centisome position: 47.75
GC content: 27.32
Gene sequence:
>831_bases ATGAAATACTTACACAGAAATTTCTATATATTAGCTGCAATCTGTTTAATAGCTGTATATCATGTATTTAGCAAGTCTGA CAATTTAGTAGAACGTAATATAAGTTCTACTAATGATATTAATCAGCATGATAACTCTCAACAAATAGGCAATAATAATG TCCAACTTGCTACTACTTCTGAAGATCAAGACAACAATATTAATGAAGATAATAATATTTCTACTAATAATTCGAAAGAA ACCATTAATTCAGTATTAAAAATCAATAAGTATGATATTGTACTAGGAAATAAAGACTCTAATATTAAGATTTTTGAATA TTTTTCATATGCTTGTTATCATTGTGCTCGCTACCATGAAAAGATTTTTCCTACAATTAAGCATAAATTTATAGATACCA ATAAAATAGCTTACATTACACGTGAGTTTATAACTTCAAAACAAGATTTAGATGGAGCAATGCTATCTAGATGTGGTGGG ACATTAATGTGGAATAAGTTTCATACTACATTATTAGAGCAGCAAGATAAATGGGTGTTTAACAAAAATTACATGAATTG GCTGAAGGATATAGGAAAAATTGGAGGTATTACCGCAGATCAGTTTCTTAATTGTTTTAAAGATGAAATATTAGCTCAGC AGCTAATGCTTAATACTGTAAATATTAGTAAGTTTGAAATATTTGATGGAACTCCATGTATTATTGCTGTTATTAATGAT GAACATATAATTAGAATAGAAAACGTTATTACAGAAATTTCAGACATAGTTGAAAAAGCAGCTAATTCTAAAGATAAGAA AAATGATATTACAGAAGCTCAAGAAAAGTAA
Upstream 100 bases:
>100_bases AAGTAGTATATAGTTTTTTAGAGATATGAAGTGTGAATGGTAAACTGTAATAGATTACAAGAATCACTATATCTAACTCA TATAAATATAAATACTAAAT
Downstream 100 bases:
>100_bases AAATATGCTCGTATTTACTCATTAGCATTTGGTTTTTTAGAAAATAATAGTTTAAAAATATAGTAGTAAATAGAAAGATA GTTTTTTTAATATTTATATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MKYLHRNFYILAAICLIAVYHVFSKSDNLVERNISSTNDINQHDNSQQIGNNNVQLATTSEDQDNNINEDNNISTNNSKE TINSVLKINKYDIVLGNKDSNIKIFEYFSYACYHCARYHEKIFPTIKHKFIDTNKIAYITREFITSKQDLDGAMLSRCGG TLMWNKFHTTLLEQQDKWVFNKNYMNWLKDIGKIGGITADQFLNCFKDEILAQQLMLNTVNISKFEIFDGTPCIIAVIND EHIIRIENVITEISDIVEKAANSKDKKNDITEAQEK
Sequences:
>Translated_276_residues MKYLHRNFYILAAICLIAVYHVFSKSDNLVERNISSTNDINQHDNSQQIGNNNVQLATTSEDQDNNINEDNNISTNNSKE TINSVLKINKYDIVLGNKDSNIKIFEYFSYACYHCARYHEKIFPTIKHKFIDTNKIAYITREFITSKQDLDGAMLSRCGG TLMWNKFHTTLLEQQDKWVFNKNYMNWLKDIGKIGGITADQFLNCFKDEILAQQLMLNTVNISKFEIFDGTPCIIAVIND EHIIRIENVITEISDIVEKAANSKDKKNDITEAQEK >Mature_276_residues MKYLHRNFYILAAICLIAVYHVFSKSDNLVERNISSTNDINQHDNSQQIGNNNVQLATTSEDQDNNINEDNNISTNNSKE TINSVLKINKYDIVLGNKDSNIKIFEYFSYACYHCARYHEKIFPTIKHKFIDTNKIAYITREFITSKQDLDGAMLSRCGG TLMWNKFHTTLLEQQDKWVFNKNYMNWLKDIGKIGGITADQFLNCFKDEILAQQLMLNTVNISKFEIFDGTPCIIAVIND EHIIRIENVITEISDIVEKAANSKDKKNDITEAQEK
Specific function: May be required for disulfide bond formation in some proteins [H]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31853; Mature: 31853
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLHRNFYILAAICLIAVYHVFSKSDNLVERNISSTNDINQHDNSQQIGNNNVQLATTS CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCHHCCCCCEEEEECC EDQDNNINEDNNISTNNSKETINSVLKINKYDIVLGNKDSNIKIFEYFSYACYHCARYHE CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHH KIFPTIKHKFIDTNKIAYITREFITSKQDLDGAMLSRCGGTLMWNKFHTTLLEQQDKWVF HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEHHHHHHHHHHCCCEEE NKNYMNWLKDIGKIGGITADQFLNCFKDEILAQQLMLNTVNISKFEIFDGTPCIIAVIND CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECC EHIIRIENVITEISDIVEKAANSKDKKNDITEAQEK CCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure MKYLHRNFYILAAICLIAVYHVFSKSDNLVERNISSTNDINQHDNSQQIGNNNVQLATTS CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCHHCCCCCEEEEECC EDQDNNINEDNNISTNNSKETINSVLKINKYDIVLGNKDSNIKIFEYFSYACYHCARYHE CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHH KIFPTIKHKFIDTNKIAYITREFITSKQDLDGAMLSRCGGTLMWNKFHTTLLEQQDKWVF HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEHHHHHHHHHHCCCEEE NKNYMNWLKDIGKIGGITADQFLNCFKDEILAQQLMLNTVNISKFEIFDGTPCIIAVIND CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECC EHIIRIENVITEISDIVEKAANSKDKKNDITEAQEK CCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA