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The map label for this gene is rpmI

Identifier: 148284325

GI number: 148284325

Start: 529224

End: 529430

Strand: Direct

Name: rpmI

Synonym: OTBS_0557

Alternate gene names: 148284325

Gene position: 529224-529430 (Clockwise)

Preceding gene: 148284321

Following gene: 148284326

Centisome position: 24.88

GC content: 34.78

Gene sequence:

>207_bases
ATGCCTAAGCTTAAAACTAAATCAGCAGTTAAAAAGCGCTTTAGCCTATCCTCAAGTGGTAAGCTGAAAGTAACACAAGC
AGGAAAGCGGCATTTTATGCGCCGTAGAACTAAGAAGCAATTGAGAAATTTAAGAAGTACAACAACTCTTATAGGACAAG
ATGCTAAAAATATTATTAAGTATCTTATGCCTTATGGTGTTCAATAA

Upstream 100 bases:

>100_bases
TTAAGTTATTGACACTACAAATTTAATACTGCTAGGAGTACTGTAGTTTCAAAAATAAAGTATATAATTTATAAAAAATA
TCTTATAGGATAATATTATC

Downstream 100 bases:

>100_bases
ATTTATAAGGGATTTTTAAATGTCACGCGCAAGATCAGGGAAAGTTAATAAAAATCGTCATAAAAAAATCTTAAAATTAG
CTAAAGGTTATCGTGGTAGA

Product: 50S ribosomal protein L35

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 67

Protein sequence:

>68_residues
MPKLKTKSAVKKRFSLSSSGKLKVTQAGKRHFMRRRTKKQLRNLRSTTTLIGQDAKNIIKYLMPYGVQ

Sequences:

>Translated_68_residues
MPKLKTKSAVKKRFSLSSSGKLKVTQAGKRHFMRRRTKKQLRNLRSTTTLIGQDAKNIIKYLMPYGVQ
>Mature_67_residues
PKLKTKSAVKKRFSLSSSGKLKVTQAGKRHFMRRRTKKQLRNLRSTTTLIGQDAKNIIKYLMPYGVQ

Specific function: Unknown

COG id: COG0291

COG function: function code J; Ribosomal protein L35

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L35P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL35_ORITB (A5CCZ3)

Other databases:

- EMBL:   AM494475
- RefSeq:   YP_001248415.1
- ProteinModelPortal:   A5CCZ3
- SMR:   A5CCZ3
- STRING:   A5CCZ3
- GeneID:   5218893
- GenomeReviews:   AM494475_GR
- KEGG:   ots:OTBS_0557
- eggNOG:   COG0291
- HOGENOM:   HBG734125
- OMA:   AHAGKRH
- ProtClustDB:   PRK00172
- BioCyc:   OTSU357244:OTBS_0557-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00514
- InterPro:   IPR021137
- InterPro:   IPR018265
- InterPro:   IPR001706
- PRINTS:   PR00064
- TIGRFAMs:   TIGR00001

Pfam domain/function: PF01632 Ribosomal_L35p

EC number: NA

Molecular weight: Translated: 7851; Mature: 7719

Theoretical pI: Translated: 12.44; Mature: 12.44

Prosite motif: PS00936 RIBOSOMAL_L35

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLKTKSAVKKRFSLSSSGKLKVTQAGKRHFMRRRTKKQLRNLRSTTTLIGQDAKNIIK
CCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
YLMPYGVQ
HHHHCCCC
>Mature Secondary Structure 
PKLKTKSAVKKRFSLSSSGKLKVTQAGKRHFMRRRTKKQLRNLRSTTTLIGQDAKNIIK
CCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
YLMPYGVQ
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA