BacMap

Definition	Orientia tsutsugamushi Boryong, complete genome.
Accession	NC_009488
Length	2,127,051

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The map label for this gene is ank1C3 [C]

Identifier: 148284280

GI number: 148284280

Start: 456532

End: 457176

Strand: Direct

Name: ank1C3 [C]

Synonym: OTBS_0476

Alternate gene names: 148284280

Gene position: 456532-457176 (Clockwise)

Preceding gene: 148284279

Following gene: 148284282

Centisome position: 21.46

GC content: 29.92

Gene sequence:

>645_bases
ATGATATTCAAATCTAAGACTAAATATACTTTACATAGCGCTATTCAAGATAGTGATATTAAAAAAGTGAAGCAGCTTAT
TAATAAGGATAGTACACTTGTCAATTCAAAATATAAAGATGGTACTACAGCTTTATCTGTTGCTTTGAAATATAAGAATC
TACCTATTGCTAAGATTTTGCTGAACAATGGAGCTAATGTAAATGCAAAAAATAATGATGGGCACACTGCTTTACATCTT
GTCGTTGACAGAATTCAAGTATATTATGAATTTTTCGAAAAATATCCTGTCTATTGCAATGATCATATAGCATTACTGCT
AAAATATAATGCTGATGTAAATATCGAGAATAATCAAGGTAATACACCTTTATCTGATGCTGTTGAATGCAGATGTATAG
AACCTTTAGCAATTATGCTAAAACATAATTCTACTAGTATTAATAAAAAATATGATGAAGGAGAAACACTACTACATATT
GCTGTTCGTAATGAAATCATAGATGTTATACAGCTTTTGATTGATTATGGAGCAGATATTGATGCAAAAGATGATAACGG
CATGAATCCTATAGATTATGCTGCTAAAAGCGGTAATGCAGATGTATTAAATCTTTTAACTGAACAATCGGTACCATGGT
ATTAG

Upstream 100 bases:

>100_bases
TACCTTAAACTACCAGAGATTGGAGAACGCTTAAGTGAATATTGTAAACTTCATGCTAGTTAAAATGTAGTAAATAATTG
AGAATGAAGCGATTAAATAT

Downstream 100 bases:

>100_bases
GTTTTAACAGACAACTATACATTAATGCTAAAAAGAGAAGCTAATATGAATAAATAACTTTTACAACTGTGTTATGCTGT
TATGTTATCATCTGTTGTAT

Product: ankyrin repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MIFKSKTKYTLHSAIQDSDIKKVKQLINKDSTLVNSKYKDGTTALSVALKYKNLPIAKILLNNGANVNAKNNDGHTALHL
VVDRIQVYYEFFEKYPVYCNDHIALLLKYNADVNIENNQGNTPLSDAVECRCIEPLAIMLKHNSTSINKKYDEGETLLHI
AVRNEIIDVIQLLIDYGADIDAKDDNGMNPIDYAAKSGNADVLNLLTEQSVPWY

Sequences:

>Translated_214_residues
MIFKSKTKYTLHSAIQDSDIKKVKQLINKDSTLVNSKYKDGTTALSVALKYKNLPIAKILLNNGANVNAKNNDGHTALHL
VVDRIQVYYEFFEKYPVYCNDHIALLLKYNADVNIENNQGNTPLSDAVECRCIEPLAIMLKHNSTSINKKYDEGETLLHI
AVRNEIIDVIQLLIDYGADIDAKDDNGMNPIDYAAKSGNADVLNLLTEQSVPWY
>Mature_214_residues
MIFKSKTKYTLHSAIQDSDIKKVKQLINKDSTLVNSKYKDGTTALSVALKYKNLPIAKILLNNGANVNAKNNDGHTALHL
VVDRIQVYYEFFEKYPVYCNDHIALLLKYNADVNIENNQGNTPLSDAVECRCIEPLAIMLKHNSTSINKKYDEGETLLHI
AVRNEIIDVIQLLIDYGADIDAKDDNGMNPIDYAAKSGNADVLNLLTEQSVPWY

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 18 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI62988328, Length=186, Percent_Identity=29.5698924731183, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI52426735, Length=199, Percent_Identity=29.6482412060301, Blast_Score=81, Evalue=6e-16,
Organism=Homo sapiens, GI268607595, Length=186, Percent_Identity=29.5698924731183, Blast_Score=81, Evalue=6e-16,
Organism=Homo sapiens, GI188595682, Length=199, Percent_Identity=29.6482412060301, Blast_Score=81, Evalue=7e-16,
Organism=Homo sapiens, GI52426737, Length=199, Percent_Identity=29.6482412060301, Blast_Score=81, Evalue=7e-16,
Organism=Homo sapiens, GI32967601, Length=200, Percent_Identity=27.5, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI62177127, Length=239, Percent_Identity=28.0334728033473, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI70780357, Length=196, Percent_Identity=28.0612244897959, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI70780353, Length=196, Percent_Identity=28.0612244897959, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI70780359, Length=196, Percent_Identity=28.0612244897959, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI70780355, Length=196, Percent_Identity=28.0612244897959, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI215598574, Length=196, Percent_Identity=28.0612244897959, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI30348954, Length=204, Percent_Identity=28.4313725490196, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI157743284, Length=202, Percent_Identity=31.1881188118812, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI89363047, Length=184, Percent_Identity=26.6304347826087, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI18252778, Length=196, Percent_Identity=27.0408163265306, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI116063534, Length=179, Percent_Identity=31.2849162011173, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI16975496, Length=171, Percent_Identity=29.2397660818713, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI157739945, Length=169, Percent_Identity=31.9526627218935, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI224809478, Length=196, Percent_Identity=25, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI37620163, Length=208, Percent_Identity=29.8076923076923, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI46519147, Length=212, Percent_Identity=29.7169811320755, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI224809476, Length=193, Percent_Identity=24.8704663212435, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI224809474, Length=196, Percent_Identity=25, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI224809472, Length=193, Percent_Identity=24.8704663212435, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI224809470, Length=193, Percent_Identity=24.8704663212435, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI224809468, Length=193, Percent_Identity=24.8704663212435, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI46519154, Length=217, Percent_Identity=29.0322580645161, Blast_Score=68, Evalue=5e-12,
Organism=Homo sapiens, GI46519151, Length=217, Percent_Identity=29.0322580645161, Blast_Score=68, Evalue=5e-12,
Organism=Homo sapiens, GI87239981, Length=256, Percent_Identity=26.171875, Blast_Score=68, Evalue=5e-12,
Organism=Homo sapiens, GI116875852, Length=200, Percent_Identity=29.5, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI55742857, Length=198, Percent_Identity=29.2929292929293, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI24233530, Length=223, Percent_Identity=28.6995515695067, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI68131557, Length=208, Percent_Identity=29.3269230769231, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI304361760, Length=208, Percent_Identity=29.3269230769231, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI304361757, Length=208, Percent_Identity=29.3269230769231, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI224465233, Length=188, Percent_Identity=28.1914893617021, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI70995267, Length=173, Percent_Identity=26.5895953757225, Blast_Score=64, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI71981389, Length=198, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI25145251, Length=198, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17542700, Length=198, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71981411, Length=198, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71981414, Length=198, Percent_Identity=27.2727272727273, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI71985677, Length=204, Percent_Identity=23.5294117647059, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI212645194, Length=244, Percent_Identity=25, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI161082089, Length=201, Percent_Identity=29.3532338308458, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI161082110, Length=201, Percent_Identity=29.3532338308458, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI161082085, Length=201, Percent_Identity=29.3532338308458, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI161082096, Length=201, Percent_Identity=29.3532338308458, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI161082081, Length=201, Percent_Identity=29.3532338308458, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI161082099, Length=201, Percent_Identity=29.3532338308458, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI161082106, Length=201, Percent_Identity=29.3532338308458, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI161082092, Length=201, Percent_Identity=29.3532338308458, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI281359521, Length=226, Percent_Identity=26.5486725663717, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI281359519, Length=226, Percent_Identity=26.5486725663717, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28558752, Length=226, Percent_Identity=26.5486725663717, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28558750, Length=226, Percent_Identity=26.5486725663717, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28558756, Length=226, Percent_Identity=26.5486725663717, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28558754, Length=226, Percent_Identity=26.5486725663717, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI45550629, Length=177, Percent_Identity=30.5084745762712, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281364453, Length=187, Percent_Identity=27.807486631016, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581842, Length=187, Percent_Identity=27.807486631016, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24639454, Length=148, Percent_Identity=31.7567567567568, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI28571867, Length=184, Percent_Identity=29.3478260869565, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28571865, Length=184, Percent_Identity=29.3478260869565, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24650843, Length=225, Percent_Identity=24.8888888888889, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45552223, Length=197, Percent_Identity=28.4263959390863, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221472807, Length=197, Percent_Identity=28.4263959390863, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI17998549, Length=197, Percent_Identity=28.4263959390863, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21356741, Length=224, Percent_Identity=26.3392857142857, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24654624, Length=193, Percent_Identity=27.979274611399, Blast_Score=64, Evalue=5e-11,
Organism=Drosophila melanogaster, GI281362676, Length=171, Percent_Identity=28.6549707602339, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI20129611, Length=207, Percent_Identity=27.0531400966184, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR007685 [H]

Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]

EC number: NA

Molecular weight: Translated: 24032; Mature: 24032

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFKSKTKYTLHSAIQDSDIKKVKQLINKDSTLVNSKYKDGTTALSVALKYKNLPIAKIL
CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCEECCCCCCCCEEEEEEEEECCCCEEEEE
LNNGANVNAKNNDGHTALHLVVDRIQVYYEFFEKYPVYCNDHIALLLKYNADVNIENNQG
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEEECCCEEEECCCC
NTPLSDAVECRCIEPLAIMLKHNSTSINKKYDEGETLLHIAVRNEIIDVIQLLIDYGADI
CCCCCCCHHEEECCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCC
DAKDDNGMNPIDYAAKSGNADVLNLLTEQSVPWY
CCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIFKSKTKYTLHSAIQDSDIKKVKQLINKDSTLVNSKYKDGTTALSVALKYKNLPIAKIL
CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCEECCCCCCCCEEEEEEEEECCCCEEEEE
LNNGANVNAKNNDGHTALHLVVDRIQVYYEFFEKYPVYCNDHIALLLKYNADVNIENNQG
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEEECCCEEEECCCC
NTPLSDAVECRCIEPLAIMLKHNSTSINKKYDEGETLLHIAVRNEIIDVIQLLIDYGADI
CCCCCCCHHEEECCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCC
DAKDDNGMNPIDYAAKSGNADVLNLLTEQSVPWY
CCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA