Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

Click here to switch to the map view.

The map label for this gene is apaG [H]

Identifier: 148284173

GI number: 148284173

Start: 324523

End: 324948

Strand: Direct

Name: apaG [H]

Synonym: OTBS_0329

Alternate gene names: 148284173

Gene position: 324523-324948 (Clockwise)

Preceding gene: 148284172

Following gene: 148284175

Centisome position: 15.26

GC content: 30.99

Gene sequence:

>426_bases
ATGAATATAGAGAATCATCAATTTAATGGATTTCATGCTTTAACAGCTGATATATTGGTAACTGTAAGGCCAGCTTTTTA
TCCTGAAGCATCTAATAGATTACGTTCTATATATGTATGGCTATATAATGTCCGAATCAAAAATTTAAGACAGAATCCTG
TACAATTATTAAGTAGATATTGGCAAATATATGATTCTAGTAGTACAGTTGAAGAAACAGAAGGAGAAGGAGTAGTAGGT
CAGCAGCCTGTCTTAAATTCTATGGAAGTTTTTGAATATGTAAGCCAAACCAGGTTATTTACTAATTCTGGTCTTATGAA
AGGAAAATACACTATGCTGGATAAGTCATCTTTGGAAAAATTCAAAGTTACAATACCAACTTTTTCATTTGATGTCGACC
TATTAAATCCCAAGTTTAAAAACTAA

Upstream 100 bases:

>100_bases
GTGACTTTTTGATGTTTTTGCATAAGTTTTGTCAATTTTTTAGTAGTTTAATTAAATTATATTATTATTATTTTATTAGT
ATCATTGAAATTATAATATA

Downstream 100 bases:

>100_bases
TATAACATGATCAGTTGTGAGATATTAATATTTTCTTGTTGCAATCATAATTATTTTAGGTAACATTAGCGTATGTTTGT
CACTTTTTAACAATTCTAAC

Product: ApaG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MNIENHQFNGFHALTADILVTVRPAFYPEASNRLRSIYVWLYNVRIKNLRQNPVQLLSRYWQIYDSSSTVEETEGEGVVG
QQPVLNSMEVFEYVSQTRLFTNSGLMKGKYTMLDKSSLEKFKVTIPTFSFDVDLLNPKFKN

Sequences:

>Translated_141_residues
MNIENHQFNGFHALTADILVTVRPAFYPEASNRLRSIYVWLYNVRIKNLRQNPVQLLSRYWQIYDSSSTVEETEGEGVVG
QQPVLNSMEVFEYVSQTRLFTNSGLMKGKYTMLDKSSLEKFKVTIPTFSFDVDLLNPKFKN
>Mature_141_residues
MNIENHQFNGFHALTADILVTVRPAFYPEASNRLRSIYVWLYNVRIKNLRQNPVQLLSRYWQIYDSSSTVEETEGEGVVG
QQPVLNSMEVFEYVSQTRLFTNSGLMKGKYTMLDKSSLEKFKVTIPTFSFDVDLLNPKFKN

Specific function: Unknown

COG id: COG2967

COG function: function code P; Uncharacterized protein affecting Mg2+/Co2+ transport

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 apaG domain [H]

Homologues:

Organism=Homo sapiens, GI7661672, Length=118, Percent_Identity=36.4406779661017, Blast_Score=76, Evalue=9e-15,
Organism=Homo sapiens, GI15812188, Length=135, Percent_Identity=37.037037037037, Blast_Score=74, Evalue=3e-14,
Organism=Homo sapiens, GI15812186, Length=132, Percent_Identity=35.6060606060606, Blast_Score=74, Evalue=4e-14,
Organism=Escherichia coli, GI1786235, Length=98, Percent_Identity=41.8367346938776, Blast_Score=81, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21356905, Length=118, Percent_Identity=35.5932203389831, Blast_Score=76, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24644238, Length=118, Percent_Identity=35.5932203389831, Blast_Score=76, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007474
- InterPro:   IPR023065 [H]

Pfam domain/function: PF04379 DUF525 [H]

EC number: NA

Molecular weight: Translated: 16381; Mature: 16381

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS51087 APAG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIENHQFNGFHALTADILVTVRPAFYPEASNRLRSIYVWLYNVRIKNLRQNPVQLLSRY
CCCCCCCCCCCHHHEEEEEEEECCCCCCCCHHHHEEEEEEEEEEEEECCCCCHHHHHHHH
WQIYDSSSTVEETEGEGVVGQQPVLNSMEVFEYVSQTRLFTNSGLMKGKYTMLDKSSLEK
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCE
FKVTIPTFSFDVDLLNPKFKN
EEEECCCEEEEEEECCCCCCC
>Mature Secondary Structure
MNIENHQFNGFHALTADILVTVRPAFYPEASNRLRSIYVWLYNVRIKNLRQNPVQLLSRY
CCCCCCCCCCCHHHEEEEEEEECCCCCCCCHHHHEEEEEEEEEEEEECCCCCHHHHHHHH
WQIYDSSSTVEETEGEGVVGQQPVLNSMEVFEYVSQTRLFTNSGLMKGKYTMLDKSSLEK
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCE
FKVTIPTFSFDVDLLNPKFKN
EEEECCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA