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The map label for this gene is TrbL/VirB6

Identifier: 148284156

GI number: 148284156

Start: 279441

End: 281657

Strand: Direct

Name: TrbL/VirB6

Synonym: OTBS_0285

Alternate gene names: NA

Gene position: 279441-281657 (Clockwise)

Preceding gene: 148284152

Following gene: 148284160

Centisome position: 13.14

GC content: 30.85

Gene sequence:

>2217_bases
ATGATTCTACATAATTTCAGTGAATTTAATACTCGCAATTTGAACATAATGAATCAGCAAAATACATTATTCTTAAAGTT
TCTTGTTGGTATTATACTATTCTGCTCTGTAATTAGTTATAGTATAGCTGAATGTATAGATGCTGATGATTTTGGATTTC
CTATAATTGCTATATCATCAAGATATGATACTAAGCAGCTTACTGGACAAAAAGATAACCAAGTAGCACCTTGGATTGAT
AGTAAGCTTTTAGTTAATGGGAAGCCATTGGTTGTCATGGTTAAACATTGGAATTATCATGAATATGATAATGATATCAG
TCATCTCTCAGCTTGGTCAGCATGGTATGGAACTAATAAAAATAAACATACGCTTGCTAGCATTACAAAAAGATTTCCAG
AATGTAGGTTTCGCAATAATAAAACTTTTTCTGATTCATATGATGATAATGATGATATACCAGTTATTAATCCTCCATGT
TTATTTAAACATGGTATTGGCCTTTATGCTTTGATTGCAAAGCCTGGTGTTGATCCAAACGCTAATGTTCATTCTCAATC
GTATGGTATTCCAAAAAAAACTATTAATTTTCATGTAGGCCAAAACTACCTTAGTTCTCTTAATTCTACTGAGTTAGACT
CAGGTTTTTTGGATACTACACCTGATGGAAACATAGTCAAAACTGGAGGATATTTTCATAAATATCAGGATCAGGAGGCT
GAACAGTATGTTGGAGGAAGATTGTATTTCAAAATCCTAGATAGATTTTATGATGACAATAATGGACAATATAAGATTAT
TATTAAGTCTGGTGTTGGAGATGAAAAAGATTCACCAGAAACATTTCTTATAAATATAGTTAAAGAAATGCTATTTGGTA
ACAAAAAAAATCAAAATAAAAATGGAATAATTCAAAATCTCTTTATAAACATTCTCAAAAATCCAAGCTATAAAATAGTT
GTTAACCTTACTTTGATATTATTTATCGCATTTAGTGGGCTAGCTTTTTTAATAGGTAATATTAATATGACTGCTCATGA
GTTAGTACTTAGAACAGTAAAAATTTTGGTAATATCTGTTTTGCTGAATTCTGATACAGCTTGGAAATTTTTCTATGATT
ATCTATTCTTTATTTTTGTAGATGGCCCTCAATTTATTATTAAGACTATCAACGAAGCAACAGCAATAGGACCAGGATCA
TCAAGCATATTAGGGCTAATGATTGCTCCTCATACTTTAAAAAAGTTATTTTCAATACTATTTGTAGATTGGGGCGGGTT
TATTTACATTATTTGTTACTTAATATTATTATACTATATCTTCATAATTAGCTTTAAAGCAACAGTACTATATCTTAATG
CTTTAATTTTGGTTGGTATAGGAATAATTGTAGGTCCTGTTTTCCTCTGTTTTGTTTTATTTCAGTTTACTAAACCAATT
TTTGAAAATTGGATTAAGCAACTAACTATATATGCTCTTCAGCCAGTGATATTATTTGCTGGCATCGCGTTTGTAGGAAT
GTTTATCAGACATGAAATATATGCTTCTCTTGGTTTCAGAGTTTGTGAAGTGCCTTTTCCTCCTATTGCTAACACATTAA
TAAAAATTATTAGCGGTGATAGCTCTAAAAAACAATCGCTCTTAAATTTATGGTTTCCAGCTCAGGTACTTAAGAAAACC
TTATTATTCAGTCAAAAATGTGCTAATATACCTGTACCTGAAGATCATATTGTATATCGTGATCAAAAACCATGGCAATG
CAGTGATGGAATATCTGGTAATAGCAAGCAATTAATTACTTCAACAGATCCATCAAATGAAAAGCACTGTTCCGCATATG
AATGTAAAGCGAACCGTTACGTAGAATTACCATTTTTAGATCCTAATATCAATAAAGATAGATATAGAATAAGAAACTTT
TTTGCTGGTAATTTCGTGCAGTGGGATAGCTTATTACTACTTGCAGCTTGTGTATTTTTACTTAGCATGTTTAATGATAA
TGCAATAGCACTTGCAAATTATATTAGCAGCGGAGGAGATAGATCATCAGCTAGCGAAAAATCAACTACAGCAATAGTAT
CAACAGTAACTCCACCATCACCAACAACATTCATACCAGCTGCATTTAGTAAAATTGGTCAACAACGTACCAAAAATAGT
AACTCACATTCTAATTCTAATAGTAGATCTGGAATTAATACAGGACCTAAAAAATAA

Upstream 100 bases:

>100_bases
ATTCTATATACACATCATTTTGCATGAACTCATTACACAACAGTAACAAATATTATATTTAGTAACAACGTTCTTTTTGA
AATAAATAAAACTTTATTGT

Downstream 100 bases:

>100_bases
TTTGGTTATTTTAACCTAAGTTTGATATAATTAATAGATCATAGACGAGGTAAAGAAAGGAAAAGATAATTTAAACTTAA
AAAAAGTGAAACAGAAATTT

Product: conjugal transfer protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 738; Mature: 738

Protein sequence:

>738_residues
MILHNFSEFNTRNLNIMNQQNTLFLKFLVGIILFCSVISYSIAECIDADDFGFPIIAISSRYDTKQLTGQKDNQVAPWID
SKLLVNGKPLVVMVKHWNYHEYDNDISHLSAWSAWYGTNKNKHTLASITKRFPECRFRNNKTFSDSYDDNDDIPVINPPC
LFKHGIGLYALIAKPGVDPNANVHSQSYGIPKKTINFHVGQNYLSSLNSTELDSGFLDTTPDGNIVKTGGYFHKYQDQEA
EQYVGGRLYFKILDRFYDDNNGQYKIIIKSGVGDEKDSPETFLINIVKEMLFGNKKNQNKNGIIQNLFINILKNPSYKIV
VNLTLILFIAFSGLAFLIGNINMTAHELVLRTVKILVISVLLNSDTAWKFFYDYLFFIFVDGPQFIIKTINEATAIGPGS
SSILGLMIAPHTLKKLFSILFVDWGGFIYIICYLILLYYIFIISFKATVLYLNALILVGIGIIVGPVFLCFVLFQFTKPI
FENWIKQLTIYALQPVILFAGIAFVGMFIRHEIYASLGFRVCEVPFPPIANTLIKIISGDSSKKQSLLNLWFPAQVLKKT
LLFSQKCANIPVPEDHIVYRDQKPWQCSDGISGNSKQLITSTDPSNEKHCSAYECKANRYVELPFLDPNINKDRYRIRNF
FAGNFVQWDSLLLLAACVFLLSMFNDNAIALANYISSGGDRSSASEKSTTAIVSTVTPPSPTTFIPAAFSKIGQQRTKNS
NSHSNSNSRSGINTGPKK

Sequences:

>Translated_738_residues
MILHNFSEFNTRNLNIMNQQNTLFLKFLVGIILFCSVISYSIAECIDADDFGFPIIAISSRYDTKQLTGQKDNQVAPWID
SKLLVNGKPLVVMVKHWNYHEYDNDISHLSAWSAWYGTNKNKHTLASITKRFPECRFRNNKTFSDSYDDNDDIPVINPPC
LFKHGIGLYALIAKPGVDPNANVHSQSYGIPKKTINFHVGQNYLSSLNSTELDSGFLDTTPDGNIVKTGGYFHKYQDQEA
EQYVGGRLYFKILDRFYDDNNGQYKIIIKSGVGDEKDSPETFLINIVKEMLFGNKKNQNKNGIIQNLFINILKNPSYKIV
VNLTLILFIAFSGLAFLIGNINMTAHELVLRTVKILVISVLLNSDTAWKFFYDYLFFIFVDGPQFIIKTINEATAIGPGS
SSILGLMIAPHTLKKLFSILFVDWGGFIYIICYLILLYYIFIISFKATVLYLNALILVGIGIIVGPVFLCFVLFQFTKPI
FENWIKQLTIYALQPVILFAGIAFVGMFIRHEIYASLGFRVCEVPFPPIANTLIKIISGDSSKKQSLLNLWFPAQVLKKT
LLFSQKCANIPVPEDHIVYRDQKPWQCSDGISGNSKQLITSTDPSNEKHCSAYECKANRYVELPFLDPNINKDRYRIRNF
FAGNFVQWDSLLLLAACVFLLSMFNDNAIALANYISSGGDRSSASEKSTTAIVSTVTPPSPTTFIPAAFSKIGQQRTKNS
NSHSNSNSRSGINTGPKK
>Mature_738_residues
MILHNFSEFNTRNLNIMNQQNTLFLKFLVGIILFCSVISYSIAECIDADDFGFPIIAISSRYDTKQLTGQKDNQVAPWID
SKLLVNGKPLVVMVKHWNYHEYDNDISHLSAWSAWYGTNKNKHTLASITKRFPECRFRNNKTFSDSYDDNDDIPVINPPC
LFKHGIGLYALIAKPGVDPNANVHSQSYGIPKKTINFHVGQNYLSSLNSTELDSGFLDTTPDGNIVKTGGYFHKYQDQEA
EQYVGGRLYFKILDRFYDDNNGQYKIIIKSGVGDEKDSPETFLINIVKEMLFGNKKNQNKNGIIQNLFINILKNPSYKIV
VNLTLILFIAFSGLAFLIGNINMTAHELVLRTVKILVISVLLNSDTAWKFFYDYLFFIFVDGPQFIIKTINEATAIGPGS
SSILGLMIAPHTLKKLFSILFVDWGGFIYIICYLILLYYIFIISFKATVLYLNALILVGIGIIVGPVFLCFVLFQFTKPI
FENWIKQLTIYALQPVILFAGIAFVGMFIRHEIYASLGFRVCEVPFPPIANTLIKIISGDSSKKQSLLNLWFPAQVLKKT
LLFSQKCANIPVPEDHIVYRDQKPWQCSDGISGNSKQLITSTDPSNEKHCSAYECKANRYVELPFLDPNINKDRYRIRNF
FAGNFVQWDSLLLLAACVFLLSMFNDNAIALANYISSGGDRSSASEKSTTAIVSTVTPPSPTTFIPAAFSKIGQQRTKNS
NSHSNSNSRSGINTGPKK

Specific function: Unknown

COG id: COG3704

COG function: function code U; Type IV secretory pathway, VirB6 components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbL/virB6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007688 [H]

Pfam domain/function: PF04610 TrbL [H]

EC number: NA

Molecular weight: Translated: 83118; Mature: 83118

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILHNFSEFNTRNLNIMNQQNTLFLKFLVGIILFCSVISYSIAECIDADDFGFPIIAISS
CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
RYDTKQLTGQKDNQVAPWIDSKLLVNGKPLVVMVKHWNYHEYDNDISHLSAWSAWYGTNK
CCCHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCC
NKHTLASITKRFPECRFRNNKTFSDSYDDNDDIPVINPPCLFKHGIGLYALIAKPGVDPN
CCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCC
ANVHSQSYGIPKKTINFHVGQNYLSSLNSTELDSGFLDTTPDGNIVKTGGYFHKYQDQEA
CCCCCCCCCCCHHEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCHHHCCCHHH
EQYVGGRLYFKILDRFYDDNNGQYKIIIKSGVGDEKDSPETFLINIVKEMLFGNKKNQNK
HHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
NGIIQNLFINILKNPSYKIVVNLTLILFIAFSGLAFLIGNINMTAHELVLRTVKILVISV
CHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LLNSDTAWKFFYDYLFFIFVDGPQFIIKTINEATAIGPGSSSILGLMIAPHTLKKLFSIL
HHCCCCHHHHHHHHHHEEEECCHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHH
FVDWGGFIYIICYLILLYYIFIISFKATVLYLNALILVGIGIIVGPVFLCFVLFQFTKPI
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FENWIKQLTIYALQPVILFAGIAFVGMFIRHEIYASLGFRVCEVPFPPIANTLIKIISGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCC
SSKKQSLLNLWFPAQVLKKTLLFSQKCANIPVPEDHIVYRDQKPWQCSDGISGNSKQLIT
CHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEE
STDPSNEKHCSAYECKANRYVELPFLDPNINKDRYRIRNFFAGNFVQWDSLLLLAACVFL
CCCCCCCCCCCCEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LSMFNDNAIALANYISSGGDRSSASEKSTTAIVSTVTPPSPTTFIPAAFSKIGQQRTKNS
HHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCC
NSHSNSNSRSGINTGPKK
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MILHNFSEFNTRNLNIMNQQNTLFLKFLVGIILFCSVISYSIAECIDADDFGFPIIAISS
CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
RYDTKQLTGQKDNQVAPWIDSKLLVNGKPLVVMVKHWNYHEYDNDISHLSAWSAWYGTNK
CCCHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCC
NKHTLASITKRFPECRFRNNKTFSDSYDDNDDIPVINPPCLFKHGIGLYALIAKPGVDPN
CCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCC
ANVHSQSYGIPKKTINFHVGQNYLSSLNSTELDSGFLDTTPDGNIVKTGGYFHKYQDQEA
CCCCCCCCCCCHHEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCHHHCCCHHH
EQYVGGRLYFKILDRFYDDNNGQYKIIIKSGVGDEKDSPETFLINIVKEMLFGNKKNQNK
HHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
NGIIQNLFINILKNPSYKIVVNLTLILFIAFSGLAFLIGNINMTAHELVLRTVKILVISV
CHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LLNSDTAWKFFYDYLFFIFVDGPQFIIKTINEATAIGPGSSSILGLMIAPHTLKKLFSIL
HHCCCCHHHHHHHHHHEEEECCHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHH
FVDWGGFIYIICYLILLYYIFIISFKATVLYLNALILVGIGIIVGPVFLCFVLFQFTKPI
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FENWIKQLTIYALQPVILFAGIAFVGMFIRHEIYASLGFRVCEVPFPPIANTLIKIISGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCC
SSKKQSLLNLWFPAQVLKKTLLFSQKCANIPVPEDHIVYRDQKPWQCSDGISGNSKQLIT
CHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEE
STDPSNEKHCSAYECKANRYVELPFLDPNINKDRYRIRNFFAGNFVQWDSLLLLAACVFL
CCCCCCCCCCCCEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LSMFNDNAIALANYISSGGDRSSASEKSTTAIVSTVTPPSPTTFIPAAFSKIGQQRTKNS
HHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCC
NSHSNSNSRSGINTGPKK
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA