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The map label for this gene is yebC [C]

Identifier: 148284133

GI number: 148284133

Start: 243394

End: 244143

Strand: Direct

Name: yebC [C]

Synonym: OTBS_0251

Alternate gene names: 148284133

Gene position: 243394-244143 (Clockwise)

Preceding gene: 148284132

Following gene: 148284134

Centisome position: 11.44

GC content: 32.13

Gene sequence:

>750_bases
ATGGCAGGTCACTCAAAGTTTAAAAATATTCAGCATCGTAAGGGTGCACAGGATAAAAAGAAAGCTAAGCTATTTGCTAG
TTTGATAAGAGAAATATCTCTTAGTGCTAAATCTGGAACAGATATTCAATATAATCATAGATTAAGAGCTGCTATTTCAG
CAGCTAAATTTAATAACTTGCCTAAAGATAGAATTGAAAAAGCTATTGCACAGGCTAACAATAAAGACAATTATGAAAAT
TATTTTGAAATAACCTACGAAGGCATAATATTCGATGGGATTGCAATTATAGTTGAAGCCTTAACAGATAATACTAACCG
CACTGCAGCAAATGTTAGGGCTATTTTTAGTAAATATGGCGGTAATTTAGTCGGTACTGGTAATGCTAGCTTTTTATTTG
ATCGTTTAGGAATTATAAAATTTGAATCAAAAGCTAGTACTAGCGAAAAGTTATTTGATGCTGCTATTGAAATTGGAGCA
GAAGATATTGAATTAGATGAAGAATATAATGTTGTATACACTCCAATTAAACTTTTTACTAATATCATAGAAGAACTAGC
GCAGCTATTTGGTTATCCAGTTGAGTCATATATAGGCTGGAGACCTAGGAATACAGTTTTAATATCAGATACAGAGAAAG
CTCAAAAACTAATTAAGTTAGTCAATGCATTAGATGACGATGATGATGTGCAGCGTTTTTTTGGCAACTATGAATTTTCT
GAGCAAATCTACAACAATTCGCTTACCTAA

Upstream 100 bases:

>100_bases
TTTAATATACGATATATAATAAATTGTTATAGTTACAAGCATATTCTCAAGTTAATTAAAATAATATATTTTTAATGAGT
TTACTATTGTATTAATAATA

Downstream 100 bases:

>100_bases
AATGTTTTATTATGAAATAATAGAGTATGCTTTATAACAAAAATAATTTATAGTAGTTTAAGTTACTATCAATATTTTTT
AATAAATAAATGTAATTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MAGHSKFKNIQHRKGAQDKKKAKLFASLIREISLSAKSGTDIQYNHRLRAAISAAKFNNLPKDRIEKAIAQANNKDNYEN
YFEITYEGIIFDGIAIIVEALTDNTNRTAANVRAIFSKYGGNLVGTGNASFLFDRLGIIKFESKASTSEKLFDAAIEIGA
EDIELDEEYNVVYTPIKLFTNIIEELAQLFGYPVESYIGWRPRNTVLISDTEKAQKLIKLVNALDDDDDVQRFFGNYEFS
EQIYNNSLT

Sequences:

>Translated_249_residues
MAGHSKFKNIQHRKGAQDKKKAKLFASLIREISLSAKSGTDIQYNHRLRAAISAAKFNNLPKDRIEKAIAQANNKDNYEN
YFEITYEGIIFDGIAIIVEALTDNTNRTAANVRAIFSKYGGNLVGTGNASFLFDRLGIIKFESKASTSEKLFDAAIEIGA
EDIELDEEYNVVYTPIKLFTNIIEELAQLFGYPVESYIGWRPRNTVLISDTEKAQKLIKLVNALDDDDDVQRFFGNYEFS
EQIYNNSLT
>Mature_248_residues
AGHSKFKNIQHRKGAQDKKKAKLFASLIREISLSAKSGTDIQYNHRLRAAISAAKFNNLPKDRIEKAIAQANNKDNYENY
FEITYEGIIFDGIAIIVEALTDNTNRTAANVRAIFSKYGGNLVGTGNASFLFDRLGIIKFESKASTSEKLFDAAIEIGAE
DIELDEEYNVVYTPIKLFTNIIEELAQLFGYPVESYIGWRPRNTVLISDTEKAQKLIKLVNALDDDDDVQRFFGNYEFSE
QIYNNSLT

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=250, Percent_Identity=30, Blast_Score=98, Evalue=7e-21,
Organism=Escherichia coli, GI1788171, Length=245, Percent_Identity=40.4081632653061, Blast_Score=167, Evalue=8e-43,
Organism=Escherichia coli, GI1788294, Length=235, Percent_Identity=35.3191489361702, Blast_Score=109, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=26.2295081967213, Blast_Score=68, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6321458, Length=266, Percent_Identity=32.3308270676692, Blast_Score=105, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24583305, Length=229, Percent_Identity=30.1310043668122, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 28101; Mature: 27970

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKFKNIQHRKGAQDKKKAKLFASLIREISLSAKSGTDIQYNHRLRAAISAAKFNNL
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHCCC
PKDRIEKAIAQANNKDNYENYFEITYEGIIFDGIAIIVEALTDNTNRTAANVRAIFSKYG
CHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
GNLVGTGNASFLFDRLGIIKFESKASTSEKLFDAAIEIGAEDIELDEEYNVVYTPIKLFT
CCEEECCCHHHHHHHHCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHH
NIIEELAQLFGYPVESYIGWRPRNTVLISDTEKAQKLIKLVNALDDDDDVQRFFGNYEFS
HHHHHHHHHHCCCHHHHCCCCCCCEEEEECHHHHHHHHHHHHHCCCCHHHHHHHCCCCHH
EQIYNNSLT
HHHHCCCCC
>Mature Secondary Structure 
AGHSKFKNIQHRKGAQDKKKAKLFASLIREISLSAKSGTDIQYNHRLRAAISAAKFNNL
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHCCC
PKDRIEKAIAQANNKDNYENYFEITYEGIIFDGIAIIVEALTDNTNRTAANVRAIFSKYG
CHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
GNLVGTGNASFLFDRLGIIKFESKASTSEKLFDAAIEIGAEDIELDEEYNVVYTPIKLFT
CCEEECCCHHHHHHHHCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHH
NIIEELAQLFGYPVESYIGWRPRNTVLISDTEKAQKLIKLVNALDDDDDVQRFFGNYEFS
HHHHHHHHHHCCCHHHHCCCCCCCEEEEECHHHHHHHHHHHHHCCCCHHHHHHHCCCCHH
EQIYNNSLT
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA