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The map label for this gene is rpsU

Identifier: 148284077

GI number: 148284077

Start: 154276

End: 154482

Strand: Direct

Name: rpsU

Synonym: OTBS_0156

Alternate gene names: 148284077

Gene position: 154276-154482 (Clockwise)

Preceding gene: 148284069

Following gene: 148284079

Centisome position: 7.25

GC content: 40.58

Gene sequence:

>207_bases
GTGATTCATGTGCCAGTTAATGCGAATAATAGTGATTTGGCTATTAGAAGTCTAAAAAAGAAAATGCAGAGGGAGCTTGT
TTTTCGTTCAATGAAAATGTCTCGCTTTTATGAGCCTCCTTCAGTAAAGAGAGTAAGAAAAAAGCAAGAATCAGAGCGTA
GGCACAGAAAGGAGAGGGCGATGAGGCGCCGAATGATGGAAGAATAG

Upstream 100 bases:

>100_bases
AATTAAATATTAAGTAAAATTACTAATTAGAGCTTATATTTACTAATAATCAAGAATAAGCATATTTTATATATTTTAAG
GATTAAGGAGTAATGAAATT

Downstream 100 bases:

>100_bases
TAAATCATATTTAATTCAAGAATTTATCTTAAATTAATTCATCAGTTAATAGTTGCCATTGACCTTGCTTATTCTTATGT
TGTTTTTGCTTAAAGTAACT

Product: 30S ribosomal protein S21

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MIHVPVNANNSDLAIRSLKKKMQRELVFRSMKMSRFYEPPSVKRVRKKQESERRHRKERAMRRRMMEE

Sequences:

>Translated_68_residues
MIHVPVNANNSDLAIRSLKKKMQRELVFRSMKMSRFYEPPSVKRVRKKQESERRHRKERAMRRRMMEE
>Mature_68_residues
MIHVPVNANNSDLAIRSLKKKMQRELVFRSMKMSRFYEPPSVKRVRKKQESERRHRKERAMRRRMMEE

Specific function: Unknown

COG id: COG0828

COG function: function code J; Ribosomal protein S21

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S21P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS21_ORITB (A5CC57)

Other databases:

- EMBL:   AM494475
- RefSeq:   YP_001248167.1
- ProteinModelPortal:   A5CC57
- SMR:   A5CC57
- STRING:   A5CC57
- GeneID:   5218477
- GenomeReviews:   AM494475_GR
- KEGG:   ots:OTBS_0156
- eggNOG:   COG0828
- HOGENOM:   HBG708268
- OMA:   REMKERR
- ProtClustDB:   PRK00270
- BioCyc:   OTSU357244:OTBS_0156-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00358
- InterPro:   IPR001911
- ProDom:   PD005521
- TIGRFAMs:   TIGR00030

Pfam domain/function: PF01165 Ribosomal_S21

EC number: NA

Molecular weight: Translated: 8430; Mature: 8430

Theoretical pI: Translated: 12.05; Mature: 12.05

Prosite motif: PS01181 RIBOSOMAL_S21

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
10.3 %Met     (Translated Protein)
10.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
10.3 %Met     (Mature Protein)
10.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHVPVNANNSDLAIRSLKKKMQRELVFRSMKMSRFYEPPSVKRVRKKQESERRHRKERA
CEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
MRRRMMEE
HHHHHCCC
>Mature Secondary Structure
MIHVPVNANNSDLAIRSLKKKMQRELVFRSMKMSRFYEPPSVKRVRKKQESERRHRKERA
CEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
MRRRMMEE
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA