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The map label for this gene is psd [H]

Identifier: 148284066

GI number: 148284066

Start: 138771

End: 139463

Strand: Direct

Name: psd [H]

Synonym: OTBS_0145

Alternate gene names: 148284066

Gene position: 138771-139463 (Clockwise)

Preceding gene: 148284065

Following gene: 148284067

Centisome position: 6.52

GC content: 33.04

Gene sequence:

>693_bases
ATGCCTATACAAGATTTTTCAAAAATAATACATAAGGAAGGATATATATTTATAGTAATATCAGCAGCTGTAACTTTCTT
ACTAGGCTCGTTTAGTACAGCACTTGGCTGGATGGGAGCTCTTGTAACAATTTTTTGTGTTTATTTCTTTCGTAATCCTA
ATCGTGTAGTTCCTAAAGAGTCAGGATTGGTAATTAGTCCTGCAGATGGTAGAATACAATCTATTCTTCATGCTATGCCA
CCACCAGAATTAGGTTTGCTAGAAGAGGAAATGTTAAAAATTAGTATATTTTTAGGCGTACTTGATGTTCATGTGAATAG
AATACCAGCTGATGGAAAAATTGTATCATTAAATTATAACCCTGGTAAATTTATAAATGCTTCTCTTGATAAAGCAAGTA
TTCATAATGAACGTCAATCTGTAGTAATGGAAACTACTGATAAGCAAACAATAGTTTTTGTGCAAATAGCTGGATTAATT
GCTAGAAGAATAGTTTGTGACTTAGAAGAAGGAAATGAGGTTAGTGCTGGTGATCGTTTTGGTATAATCAGATTTGGGAG
TAGGGTAGATATTTATTTACCTAAAAAAACTGTGCCATTAGTAGCTGTAGGCCAAAGCTGTATAGGAGGAGAAACAATAC
TTGCTGATTTTAAATCAAAAAGAATTGCACCTGCAAAGTATGACACTAAATAA

Upstream 100 bases:

>100_bases
TGCTATATGCTTAAGCAAAAAATAACTCTAGTTTAGATAAGTAAAATAAAAAATTTAACTTAGTTAGTTGAAAGTGCATT
TATAAAAGGAGTATGTAATT

Downstream 100 bases:

>100_bases
TATATTATGCAGATAAAAAATTTAAATATCGAATAATGTGTTAGAAATGTGATGGGAAGATATCAGCTTTTTAAAAAGCC
TAAATTAAGCTATCCAATGC

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MPIQDFSKIIHKEGYIFIVISAAVTFLLGSFSTALGWMGALVTIFCVYFFRNPNRVVPKESGLVISPADGRIQSILHAMP
PPELGLLEEEMLKISIFLGVLDVHVNRIPADGKIVSLNYNPGKFINASLDKASIHNERQSVVMETTDKQTIVFVQIAGLI
ARRIVCDLEEGNEVSAGDRFGIIRFGSRVDIYLPKKTVPLVAVGQSCIGGETILADFKSKRIAPAKYDTK

Sequences:

>Translated_230_residues
MPIQDFSKIIHKEGYIFIVISAAVTFLLGSFSTALGWMGALVTIFCVYFFRNPNRVVPKESGLVISPADGRIQSILHAMP
PPELGLLEEEMLKISIFLGVLDVHVNRIPADGKIVSLNYNPGKFINASLDKASIHNERQSVVMETTDKQTIVFVQIAGLI
ARRIVCDLEEGNEVSAGDRFGIIRFGSRVDIYLPKKTVPLVAVGQSCIGGETILADFKSKRIAPAKYDTK
>Mature_229_residues
PIQDFSKIIHKEGYIFIVISAAVTFLLGSFSTALGWMGALVTIFCVYFFRNPNRVVPKESGLVISPADGRIQSILHAMPP
PELGLLEEEMLKISIFLGVLDVHVNRIPADGKIVSLNYNPGKFINASLDKASIHNERQSVVMETTDKQTIVFVQIAGLIA
RRIVCDLEEGNEVSAGDRFGIIRFGSRVDIYLPKKTVPLVAVGQSCIGGETILADFKSKRIAPAKYDTK

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003817
- InterPro:   IPR004428 [H]

Pfam domain/function: PF02666 PS_Dcarbxylase [H]

EC number: =4.1.1.65 [H]

Molecular weight: Translated: 25264; Mature: 25133

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIQDFSKIIHKEGYIFIVISAAVTFLLGSFSTALGWMGALVTIFCVYFFRNPNRVVPKE
CCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SGLVISPADGRIQSILHAMPPPELGLLEEEMLKISIFLGVLDVHVNRIPADGKIVSLNYN
CCEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECC
PGKFINASLDKASIHNERQSVVMETTDKQTIVFVQIAGLIARRIVCDLEEGNEVSAGDRF
CCCEEECCCCHHHHCCCHHEEEEEECCCCEEEEEEHHHHHHHHHHEECCCCCEECCCCCE
GIIRFGSRVDIYLPKKTVPLVAVGQSCIGGETILADFKSKRIAPAKYDTK
EEEEECCEEEEEECCCCCCEEEECCCCCCCHHHEEHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PIQDFSKIIHKEGYIFIVISAAVTFLLGSFSTALGWMGALVTIFCVYFFRNPNRVVPKE
CHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SGLVISPADGRIQSILHAMPPPELGLLEEEMLKISIFLGVLDVHVNRIPADGKIVSLNYN
CCEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECC
PGKFINASLDKASIHNERQSVVMETTDKQTIVFVQIAGLIARRIVCDLEEGNEVSAGDRF
CCCEEECCCCHHHHCCCHHEEEEEECCCCEEEEEEHHHHHHHHHHEECCCCCEECCCCCE
GIIRFGSRVDIYLPKKTVPLVAVGQSCIGGETILADFKSKRIAPAKYDTK
EEEEECCEEEEEECCCCCCEEEECCCCCCCHHHEEHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA