| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is ank1u1
Identifier: 148284034
GI number: 148284034
Start: 76112
End: 78367
Strand: Direct
Name: ank1u1
Synonym: OTBS_0084
Alternate gene names: NA
Gene position: 76112-78367 (Clockwise)
Preceding gene: 148284033
Following gene: 148284035
Centisome position: 3.58
GC content: 38.48
Gene sequence:
>2256_bases ATGCGCAACAGTGATGACAGTGATATTGAGTCAAGTATAAATTCAGGAAGTAGTAGCGATTCAGGTAATAGTAGTGATAG TAGTGATAGTGATGATAGTATATTTGATTTAATACGCTATTGTCGTGATATTCATGATATTGAAAACTTGGTATCTAGGA TTCATATTGATCCAGAGAGCCCAACAAGGATAACCGAGAGTGGTCGCACTACAATACATGCCGCAATAGCGTGTATAGAT TCGCAATACTTGCCAGTAGTATTGTATCTCCTAATTAGAGCTGGTGTGCCTGTTAATGTTATGAGTAGGTATTCTTCTAA TACGGCTGCACATATGTTGTCAGATAGTGGAGATGTGCACCTTACCTCTGCGAGAACATTACTCACGAGTGGGACAGATG TTGATATTAATATTCGGAACAACAATGGAGATACACCGCTGCATAATGCGTTACGGAATGGCGCTCCTAAAATTGCGCTT TTGTGGATAAACAGCGGTGCTAATGTAAATATTCTAAACAACAGTTCTTTGCTACCAACGCACTATGTGCAATCTCCAGA TGTTATGAGGGTTTTAATCGATCATGGCGCAAACATAAAAGGACAGCTGATAAAAGGGAAGCTGGATACACCTCTGTGTC GTGCAATAATTTGTGACTATGTTGACGTAGTTGTCGAATTACTGAGAAATGTAAATCTGCTTGATTACACAGACGACGAA GCAGATTATCATGTAAAGTTAGCACAGTCGTACGAAGGTCGTGATACTGAAATACCGAAATTATTACGTGTTGCAGGACT GGATCGATCACCGGCGCCCTTATTCCAATTGTCAAATAAATGGCCTTTGCACGATGCAATACAAACTGGATCTATTGATA GCTTTATTGAATTGTTAGCTGCAAGAGACACATATAATATAAATCCTAATCAATTAAATGGTCATAAATGCTCTCCTATG CGTCTAGTATTGGAAACGAAAGATATAAAAGACATAAAAGACATAAATCAAGAATACACAGATCAAGCCTTCATGCTGAG AGCATTAATTGTAGCTAGAGCTAATGTCAATGAGACATCATATGAAGATGGAAGCCTACTACGTACTGCTATATGTAAAC GTAATCCCAAAATAGCCAGTATATTAATTGCGGCTGGAGCATCAGTTACCAATGAAGATTCGTGTGAAGAAGATAATGAC TTAGAATTAATGATGGCATCAGGCGACTATGATATGTCTGTATTCGACCGCAATATTAGTATTAGTAATCCACAAGCAAG GCTTATGGAGGCTGTAGAATCTGGGAACATACTCAATATTGAATATCTCATAACATGCCATCATGCTGATGTTAATGTAT ACGATGAATCAGATATACCAGTGATTTTTGCTGCTGCAAAATCTGGTGTATTTGAAGTAGTAAAACACTTGGTGTTATCA CGTCATGCAAACCTAGATGTAAGAACTAATGATGGGCAAACAGCATTGCATTACGCAGTTTTGCCTCCTATGTTCGAAAA GTATGGCGTGCAAGGTAAATTAAAAACAATCACTTTCTTAAGTCATTATATTGATGTAAACTCTGTAGATGGTGGTGGAT ATACTCCATTACATAAAGCTATACAATGGTGTTTCAATGAAGCAGTAGATCTATTGATAGAAGAGCTAGGCGCAGATGTG AATCAGGCAGTTATTGGAAGAACAGAAATTACAGAGCAGATGATAACAGATGCGGTGTTAACCAATGACAGAACGTCAAT AGCTGAACTGACAGCAACAAGTGATCGTGAACATACACAATATACACCTTTGCATATTGCTGCTGCATTTAAAAATTGCA ATGTCATGCATGTGTTAGTTGAGAATGGGGCAATTCGTTCTGCAGTTAATCGTATTGGGGAAACAGCCATGCATATATCA GCTGGTGTTTCAGATATTGATTCAATGATTACATTAATTAAATTAGAAGCAAGTTACATCATACAAAATAAACTTAATGG CAGTACTCCAATACATATTATTGCAATGCTAGGATCGCTTAACCGCCTCTTGCAAAAGCTTGACAGTAATAATGATATCC TACAAAATGTTCCAACTAACAATGCTGGTAAAATTCCGGAGGAATATATGGCCATGTGGCCAGAGCAACTGCCGCCTGAT GATGAGAGCACAGAAGCAAGTCTTAGCAGCGATGACGACGACGTTGGTTGCGACTTCGGTGGCGCAATGGAGCATGAACA GCATTATAATAGCTGA
Upstream 100 bases:
>100_bases TCAAGTTTTTAATGATAGTAAGAAATTAGTTGTTGTAATGAATAATAAAACCTTGTACGTTAGAATACTAAATTCACAAT TATAGTGAGGTGGATACATT
Downstream 100 bases:
>100_bases ACCAGTATAAAACCAGTTATGTTATATACTTTTCGAATAGAGTATCTATGTCACAGTGATATTTCATTTTTCTTGATTTA GCTTAAAAGCATTTTTTCAA
Product: ankyrin repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 751; Mature: 751
Protein sequence:
>751_residues MRNSDDSDIESSINSGSSSDSGNSSDSSDSDDSIFDLIRYCRDIHDIENLVSRIHIDPESPTRITESGRTTIHAAIACID SQYLPVVLYLLIRAGVPVNVMSRYSSNTAAHMLSDSGDVHLTSARTLLTSGTDVDINIRNNNGDTPLHNALRNGAPKIAL LWINSGANVNILNNSSLLPTHYVQSPDVMRVLIDHGANIKGQLIKGKLDTPLCRAIICDYVDVVVELLRNVNLLDYTDDE ADYHVKLAQSYEGRDTEIPKLLRVAGLDRSPAPLFQLSNKWPLHDAIQTGSIDSFIELLAARDTYNINPNQLNGHKCSPM RLVLETKDIKDIKDINQEYTDQAFMLRALIVARANVNETSYEDGSLLRTAICKRNPKIASILIAAGASVTNEDSCEEDND LELMMASGDYDMSVFDRNISISNPQARLMEAVESGNILNIEYLITCHHADVNVYDESDIPVIFAAAKSGVFEVVKHLVLS RHANLDVRTNDGQTALHYAVLPPMFEKYGVQGKLKTITFLSHYIDVNSVDGGGYTPLHKAIQWCFNEAVDLLIEELGADV NQAVIGRTEITEQMITDAVLTNDRTSIAELTATSDREHTQYTPLHIAAAFKNCNVMHVLVENGAIRSAVNRIGETAMHIS AGVSDIDSMITLIKLEASYIIQNKLNGSTPIHIIAMLGSLNRLLQKLDSNNDILQNVPTNNAGKIPEEYMAMWPEQLPPD DESTEASLSSDDDDVGCDFGGAMEHEQHYNS
Sequences:
>Translated_751_residues MRNSDDSDIESSINSGSSSDSGNSSDSSDSDDSIFDLIRYCRDIHDIENLVSRIHIDPESPTRITESGRTTIHAAIACID SQYLPVVLYLLIRAGVPVNVMSRYSSNTAAHMLSDSGDVHLTSARTLLTSGTDVDINIRNNNGDTPLHNALRNGAPKIAL LWINSGANVNILNNSSLLPTHYVQSPDVMRVLIDHGANIKGQLIKGKLDTPLCRAIICDYVDVVVELLRNVNLLDYTDDE ADYHVKLAQSYEGRDTEIPKLLRVAGLDRSPAPLFQLSNKWPLHDAIQTGSIDSFIELLAARDTYNINPNQLNGHKCSPM RLVLETKDIKDIKDINQEYTDQAFMLRALIVARANVNETSYEDGSLLRTAICKRNPKIASILIAAGASVTNEDSCEEDND LELMMASGDYDMSVFDRNISISNPQARLMEAVESGNILNIEYLITCHHADVNVYDESDIPVIFAAAKSGVFEVVKHLVLS RHANLDVRTNDGQTALHYAVLPPMFEKYGVQGKLKTITFLSHYIDVNSVDGGGYTPLHKAIQWCFNEAVDLLIEELGADV NQAVIGRTEITEQMITDAVLTNDRTSIAELTATSDREHTQYTPLHIAAAFKNCNVMHVLVENGAIRSAVNRIGETAMHIS AGVSDIDSMITLIKLEASYIIQNKLNGSTPIHIIAMLGSLNRLLQKLDSNNDILQNVPTNNAGKIPEEYMAMWPEQLPPD DESTEASLSSDDDDVGCDFGGAMEHEQHYNS >Mature_751_residues MRNSDDSDIESSINSGSSSDSGNSSDSSDSDDSIFDLIRYCRDIHDIENLVSRIHIDPESPTRITESGRTTIHAAIACID SQYLPVVLYLLIRAGVPVNVMSRYSSNTAAHMLSDSGDVHLTSARTLLTSGTDVDINIRNNNGDTPLHNALRNGAPKIAL LWINSGANVNILNNSSLLPTHYVQSPDVMRVLIDHGANIKGQLIKGKLDTPLCRAIICDYVDVVVELLRNVNLLDYTDDE ADYHVKLAQSYEGRDTEIPKLLRVAGLDRSPAPLFQLSNKWPLHDAIQTGSIDSFIELLAARDTYNINPNQLNGHKCSPM RLVLETKDIKDIKDINQEYTDQAFMLRALIVARANVNETSYEDGSLLRTAICKRNPKIASILIAAGASVTNEDSCEEDND LELMMASGDYDMSVFDRNISISNPQARLMEAVESGNILNIEYLITCHHADVNVYDESDIPVIFAAAKSGVFEVVKHLVLS RHANLDVRTNDGQTALHYAVLPPMFEKYGVQGKLKTITFLSHYIDVNSVDGGGYTPLHKAIQWCFNEAVDLLIEELGADV NQAVIGRTEITEQMITDAVLTNDRTSIAELTATSDREHTQYTPLHIAAAFKNCNVMHVLVENGAIRSAVNRIGETAMHIS AGVSDIDSMITLIKLEASYIIQNKLNGSTPIHIIAMLGSLNRLLQKLDSNNDILQNVPTNNAGKIPEEYMAMWPEQLPPD DESTEASLSSDDDDVGCDFGGAMEHEQHYNS
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 18 ANK repeats [H]
Homologues:
Organism=Homo sapiens, GI32967601, Length=628, Percent_Identity=24.8407643312102, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI68131557, Length=349, Percent_Identity=28.3667621776504, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI157743284, Length=652, Percent_Identity=24.6932515337423, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI70780359, Length=664, Percent_Identity=23.9457831325301, Blast_Score=77, Evalue=6e-14, Organism=Homo sapiens, GI70780355, Length=664, Percent_Identity=23.9457831325301, Blast_Score=77, Evalue=7e-14, Organism=Homo sapiens, GI215598574, Length=664, Percent_Identity=23.9457831325301, Blast_Score=77, Evalue=8e-14, Organism=Homo sapiens, GI70780353, Length=664, Percent_Identity=23.9457831325301, Blast_Score=77, Evalue=9e-14, Organism=Homo sapiens, GI70780357, Length=664, Percent_Identity=23.9457831325301, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI188595682, Length=551, Percent_Identity=23.4119782214156, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI52426737, Length=551, Percent_Identity=23.4119782214156, Blast_Score=75, Evalue=3e-13, Organism=Homo sapiens, GI52426735, Length=550, Percent_Identity=23.2727272727273, Blast_Score=70, Evalue=9e-12, Organism=Caenorhabditis elegans, GI25145251, Length=610, Percent_Identity=25.2459016393443, Blast_Score=86, Evalue=7e-17, Organism=Caenorhabditis elegans, GI71981389, Length=610, Percent_Identity=25.2459016393443, Blast_Score=86, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17542700, Length=610, Percent_Identity=25.2459016393443, Blast_Score=86, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71981414, Length=610, Percent_Identity=25.4098360655738, Blast_Score=85, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71981411, Length=612, Percent_Identity=24.8366013071895, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI161082089, Length=697, Percent_Identity=24.2467718794835, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI161082110, Length=702, Percent_Identity=24.6438746438746, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI161082096, Length=702, Percent_Identity=24.6438746438746, Blast_Score=84, Evalue=4e-16, Organism=Drosophila melanogaster, GI161082099, Length=648, Percent_Identity=24.6913580246914, Blast_Score=84, Evalue=4e-16, Organism=Drosophila melanogaster, GI161082085, Length=669, Percent_Identity=24.5142002989537, Blast_Score=83, Evalue=6e-16, Organism=Drosophila melanogaster, GI161082081, Length=681, Percent_Identity=24.6696035242291, Blast_Score=83, Evalue=8e-16, Organism=Drosophila melanogaster, GI161082106, Length=681, Percent_Identity=24.6696035242291, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI281359521, Length=716, Percent_Identity=24.7206703910615, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI281359519, Length=716, Percent_Identity=24.7206703910615, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI28558752, Length=716, Percent_Identity=24.7206703910615, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI28558750, Length=716, Percent_Identity=24.7206703910615, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI28558756, Length=716, Percent_Identity=24.7206703910615, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI28558754, Length=716, Percent_Identity=24.7206703910615, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI45552223, Length=724, Percent_Identity=21.6850828729282, Blast_Score=69, Evalue=9e-12, Organism=Drosophila melanogaster, GI221472807, Length=724, Percent_Identity=21.6850828729282, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI17998549, Length=724, Percent_Identity=21.6850828729282, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002110 - InterPro: IPR020683 - InterPro: IPR007685 [H]
Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]
EC number: NA
Molecular weight: Translated: 82644; Mature: 82644
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNSDDSDIESSINSGSSSDSGNSSDSSDSDDSIFDLIRYCRDIHDIENLVSRIHIDPES CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCC PTRITESGRTTIHAAIACIDSQYLPVVLYLLIRAGVPVNVMSRYSSNTAAHMLSDSGDVH CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHCCCCCEE LTSARTLLTSGTDVDINIRNNNGDTPLHNALRNGAPKIALLWINSGANVNILNNSSLLPT EEECCEEEECCCEEEEEEECCCCCCHHHHHHHCCCCEEEEEEEECCCEEEEECCCCCCCH HYVQSPDVMRVLIDHGANIKGQLIKGKLDTPLCRAIICDYVDVVVELLRNVNLLDYTDDE HCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCC ADYHVKLAQSYEGRDTEIPKLLRVAGLDRSPAPLFQLSNKWPLHDAIQTGSIDSFIELLA CCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHCCCHHHHHHHHH ARDTYNINPNQLNGHKCSPMRLVLETKDIKDIKDINQEYTDQAFMLRALIVARANVNETS HCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC YEDGSLLRTAICKRNPKIASILIAAGASVTNEDSCEEDNDLELMMASGDYDMSVFDRNIS CCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCC ISNPQARLMEAVESGNILNIEYLITCHHADVNVYDESDIPVIFAAAKSGVFEVVKHLVLS CCCHHHHHHHHHHCCCEEEEEEEEEEEECCCEEECCCCCCEEEEECCCCHHHHHHHHHHH RHANLDVRTNDGQTALHYAVLPPMFEKYGVQGKLKTITFLSHYIDVNSVDGGGYTPLHKA HCCCCEEEECCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHH IQWCFNEAVDLLIEELGADVNQAVIGRTEITEQMITDAVLTNDRTSIAELTATSDREHTQ HHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCC YTPLHIAAAFKNCNVMHVLVENGAIRSAVNRIGETAMHISAGVSDIDSMITLIKLEASYI CCCEEEEEHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH IQNKLNGSTPIHIIAMLGSLNRLLQKLDSNNDILQNVPTNNAGKIPEEYMAMWPEQLPPD HHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHCCCCCCCC DESTEASLSSDDDDVGCDFGGAMEHEQHYNS CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC >Mature Secondary Structure MRNSDDSDIESSINSGSSSDSGNSSDSSDSDDSIFDLIRYCRDIHDIENLVSRIHIDPES CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCC PTRITESGRTTIHAAIACIDSQYLPVVLYLLIRAGVPVNVMSRYSSNTAAHMLSDSGDVH CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHCCCCCEE LTSARTLLTSGTDVDINIRNNNGDTPLHNALRNGAPKIALLWINSGANVNILNNSSLLPT EEECCEEEECCCEEEEEEECCCCCCHHHHHHHCCCCEEEEEEEECCCEEEEECCCCCCCH HYVQSPDVMRVLIDHGANIKGQLIKGKLDTPLCRAIICDYVDVVVELLRNVNLLDYTDDE HCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCC ADYHVKLAQSYEGRDTEIPKLLRVAGLDRSPAPLFQLSNKWPLHDAIQTGSIDSFIELLA CCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHCCCHHHHHHHHH ARDTYNINPNQLNGHKCSPMRLVLETKDIKDIKDINQEYTDQAFMLRALIVARANVNETS HCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC YEDGSLLRTAICKRNPKIASILIAAGASVTNEDSCEEDNDLELMMASGDYDMSVFDRNIS CCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCC ISNPQARLMEAVESGNILNIEYLITCHHADVNVYDESDIPVIFAAAKSGVFEVVKHLVLS CCCHHHHHHHHHHCCCEEEEEEEEEEEECCCEEECCCCCCEEEEECCCCHHHHHHHHHHH RHANLDVRTNDGQTALHYAVLPPMFEKYGVQGKLKTITFLSHYIDVNSVDGGGYTPLHKA HCCCCEEEECCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHH IQWCFNEAVDLLIEELGADVNQAVIGRTEITEQMITDAVLTNDRTSIAELTATSDREHTQ HHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCC YTPLHIAAAFKNCNVMHVLVENGAIRSAVNRIGETAMHISAGVSDIDSMITLIKLEASYI CCCEEEEEHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH IQNKLNGSTPIHIIAMLGSLNRLLQKLDSNNDILQNVPTNNAGKIPEEYMAMWPEQLPPD HHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHCCCCCCCC DESTEASLSSDDDDVGCDFGGAMEHEQHYNS CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA