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The map label for this gene is tnD [H]

Identifier: 148284033

GI number: 148284033

Start: 74292

End: 75254

Strand: Direct

Name: tnD [H]

Synonym: OTBS_0082

Alternate gene names: 148284033

Gene position: 74292-75254 (Clockwise)

Preceding gene: 148284031

Following gene: 148284034

Centisome position: 3.49

GC content: 32.19

Gene sequence:

>963_bases
ATGAATAGTATAATTATAGGAATTGACGTTTCTAAACAGACGTTTGATGCAGCTGTGTTAATTAATAATAAAGTTCAAAC
AAGAAAATTTAATAATAATTCTGAAGGATTTAACAAATTAGTAACATGGTTAAAAAGCAGAGGAACTGGACATGTTTGTA
TGGAAGCAACAGGTATCTACTGGAAAAGCTTAGCGAAATATCTGTACGATTATGGCTATAAAGTGAGCGTAGTAAATCCT
GCACGTATTAAAGGTTTTGCAATAAGTAAACTTAGTCGTACAAAAACAGATAAAGCAGACAGTGTATTAATCGCAGATTT
TTGCAAAGCAATGAAACCGGAAGCATGGTATCCACAGCCGCCTTATATTCAAGAACTACAGCAGCTAGTTAATCGCTTGA
ATGTTTTAATTAATCATAAAACACAAGAAACAAATAGATTAGAAGGAGCTTCTAAAGCAATTGCTAATAATATTCAAATG
CACATTGAATTTCTTGAAACGCAAGTTAAAGAAATTGAACAACTAATCAATGCCCATATTAAAAATAACAAAGATTTTCA
CGATAAAGCTATGTTGCTTGAGTCAATACCAGGTATAGGAGCAAAAACACAAGCTATAGTTCTTGCTTTTTTTGCAGATA
TTGAGAAATTTAGTTCTGCTAAACAAGTTGTAGCTTTTGTAGGTCTTAATCCTAAGCATCGTCAATCTGGTAGTTCTGTG
CGTGGTGTCAGTAGAATCTCTAGAACTGGTAATTCAGATCTACGTAAGGCTTTTTATATGCCTGCTATGTCTGCTTTAAG
ACATAATTGTATTATCAAGCAATTTTCTCAACGTTTATCTGATAGTGGTAAACCCAAAATGCTTATCCTTATTGCTGCTA
TGCGTAAGTTATTACATATTATTTATGGTGTTTTAAAGCATAATTCTCCTTTTAATCCTAATGTTTCAATCTATCAGAAA
TAA

Upstream 100 bases:

>100_bases
GCTTTTTTGAATAACTAAAAAAACCGAACGGTATTCTTAGGCTAAAAAGCCTGTATTTACAAGGTTGGTTTTGAGATATT
TAACATAAAATTTGGTGATT

Downstream 100 bases:

>100_bases
TAATTTTATAAAAAAGATGTAATTTTTTATAAAATTATTATTTCTTTTCTTGATTCTTATCACGGTATCTGAATGGATAT
TGGAAGCAGACATAAAAGGT

Product: transposase and inactivated derivative

Products: NA

Alternate protein names: PIVML [H]

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MNSIIIGIDVSKQTFDAAVLINNKVQTRKFNNNSEGFNKLVTWLKSRGTGHVCMEATGIYWKSLAKYLYDYGYKVSVVNP
ARIKGFAISKLSRTKTDKADSVLIADFCKAMKPEAWYPQPPYIQELQQLVNRLNVLINHKTQETNRLEGASKAIANNIQM
HIEFLETQVKEIEQLINAHIKNNKDFHDKAMLLESIPGIGAKTQAIVLAFFADIEKFSSAKQVVAFVGLNPKHRQSGSSV
RGVSRISRTGNSDLRKAFYMPAMSALRHNCIIKQFSQRLSDSGKPKMLILIAAMRKLLHIIYGVLKHNSPFNPNVSIYQK

Sequences:

>Translated_320_residues
MNSIIIGIDVSKQTFDAAVLINNKVQTRKFNNNSEGFNKLVTWLKSRGTGHVCMEATGIYWKSLAKYLYDYGYKVSVVNP
ARIKGFAISKLSRTKTDKADSVLIADFCKAMKPEAWYPQPPYIQELQQLVNRLNVLINHKTQETNRLEGASKAIANNIQM
HIEFLETQVKEIEQLINAHIKNNKDFHDKAMLLESIPGIGAKTQAIVLAFFADIEKFSSAKQVVAFVGLNPKHRQSGSSV
RGVSRISRTGNSDLRKAFYMPAMSALRHNCIIKQFSQRLSDSGKPKMLILIAAMRKLLHIIYGVLKHNSPFNPNVSIYQK
>Mature_320_residues
MNSIIIGIDVSKQTFDAAVLINNKVQTRKFNNNSEGFNKLVTWLKSRGTGHVCMEATGIYWKSLAKYLYDYGYKVSVVNP
ARIKGFAISKLSRTKTDKADSVLIADFCKAMKPEAWYPQPPYIQELQQLVNRLNVLINHKTQETNRLEGASKAIANNIQM
HIEFLETQVKEIEQLINAHIKNNKDFHDKAMLLESIPGIGAKTQAIVLAFFADIEKFSSAKQVVAFVGLNPKHRQSGSSV
RGVSRISRTGNSDLRKAFYMPAMSALRHNCIIKQFSQRLSDSGKPKMLILIAAMRKLLHIIYGVLKHNSPFNPNVSIYQK

Specific function: May be the site-specific invertase required for pilin gene inversion. Moraxella can express either a Q or I pilin; the inversion of 2 kb of DNA determines which pilin is expressed [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 36069; Mature: 36069

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIIIGIDVSKQTFDAAVLINNKVQTRKFNNNSEGFNKLVTWLKSRGTGHVCMEATGIY
CCCEEEEEECCCHHHCEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEHHHHH
WKSLAKYLYDYGYKVSVVNPARIKGFAISKLSRTKTDKADSVLIADFCKAMKPEAWYPQP
HHHHHHHHHHCCCEEEEECCHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCC
PYIQELQQLVNRLNVLINHKTQETNRLEGASKAIANNIQMHIEFLETQVKEIEQLINAHI
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNNKDFHDKAMLLESIPGIGAKTQAIVLAFFADIEKFSSAKQVVAFVGLNPKHRQSGSSV
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHH
RGVSRISRTGNSDLRKAFYMPAMSALRHNCIIKQFSQRLSDSGKPKMLILIAAMRKLLHI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH
IYGVLKHNSPFNPNVSIYQK
HHHHHHCCCCCCCCCEEEEC
>Mature Secondary Structure
MNSIIIGIDVSKQTFDAAVLINNKVQTRKFNNNSEGFNKLVTWLKSRGTGHVCMEATGIY
CCCEEEEEECCCHHHCEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEHHHHH
WKSLAKYLYDYGYKVSVVNPARIKGFAISKLSRTKTDKADSVLIADFCKAMKPEAWYPQP
HHHHHHHHHHCCCEEEEECCHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCC
PYIQELQQLVNRLNVLINHKTQETNRLEGASKAIANNIQMHIEFLETQVKEIEQLINAHI
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNNKDFHDKAMLLESIPGIGAKTQAIVLAFFADIEKFSSAKQVVAFVGLNPKHRQSGSSV
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHH
RGVSRISRTGNSDLRKAFYMPAMSALRHNCIIKQFSQRLSDSGKPKMLILIAAMRKLLHI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH
IYGVLKHNSPFNPNVSIYQK
HHHHHHCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2403542 [H]