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The map label for this gene is tnD [H]

Identifier: 148284013

GI number: 148284013

Start: 28785

End: 29750

Strand: Direct

Name: tnD [H]

Synonym: OTBS_0025

Alternate gene names: 148284013

Gene position: 28785-29750 (Clockwise)

Preceding gene: 148284012

Following gene: 148284014

Centisome position: 1.35

GC content: 31.68

Gene sequence:

>966_bases
ATGAATAGTATAGTTGTAGGAATTGACATTTCTAAAGAGACATTTGATGCAGCTGTGTTAATTAATAATAAAGTTCAAAC
AAGAAAATTTAATAATAGTTCTGAAGGGTTTAACAAATTAGTAACATGGTTAAAAAGCAGAGGAAGTGGACATGTTTGTA
TGGAAGCAACAGGTATCTACTGGAAAAACTTGGCTAAATATCTGTACGATTATGGTTATAAAGTGAGCGTAGTAAATCCT
GCACGTATTAAAGGTTTTGCAATGAGTAAACTTAGTCGTACAAAAACAGATAAAGCAGACAGTGTATTAATAATAGCAGA
TTTTTGCAAAGCAATGAAACCGGAAGTATGGTATCCACAGCCCATTTATATTCAAGAACTACAGCAGCTAGTTAATCACT
TGAATGTTTTAATTAAGCATAAAACACAAGAAACAAATAGATTAGAAGGAGCTTCTAAAGCAATTGCTAATAATATTCAA
ATGCATATTAAATTTCTTGAAACGCAAATTAAAGAAATTGAACAACTAATCAATGACCATATTAAAAATAACAAAGATCT
TCATAATAAAGCTATGTTACTTGAATCAATACCAGGTATAGGAGCAAAAACACAAGCTATAGTTCTGGCTTTTTTAGCAG
ATATTGAGAAATTTAGTTCTGCTAAACAAGTTGTAGCTTTTGTAGGTCTTAATCCTAAGCATCGTCAATCTGGTAGTTCT
GTGCGTGGCGCTAGTAGAATCTCTAGAACTGGTAATTCAGATCTACGTAAGTCTTTTTATATGCCTGCTATGTCTGCCTT
AAGACATAATTGTATTATCAAGCATTTTTCTCAACGTTTATCTAACACTGGTAAACCCAAAATGCTTATCCTTACTGCTG
CTATGCGTAAGTTACTACATATTATTTATGGCGTTTTGAAGCATAATTCTCCTTTTAATCTTAATGTTTCAATCCAGCAA
AAATAA

Upstream 100 bases:

>100_bases
TAACTAGCTTTTTTAACTAAAAACCGGACGGTATTCTTAGGCAAAAAAGCCTGTATTTACAAGTTTGGTTTTGAGATATT
TAACATAAAATTTGGTGATT

Downstream 100 bases:

>100_bases
TAATTTTATAAAAACTTACATCTTTTTTATAAAATTATTATTTCTTTTCTTGATTTTTAACACTATATCTAGTGTCTCTT
ATACAACAAAAAATATCGTT

Product: transposase and inactivated derivative

Products: NA

Alternate protein names: PIVML [H]

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MNSIVVGIDISKETFDAAVLINNKVQTRKFNNSSEGFNKLVTWLKSRGSGHVCMEATGIYWKNLAKYLYDYGYKVSVVNP
ARIKGFAMSKLSRTKTDKADSVLIIADFCKAMKPEVWYPQPIYIQELQQLVNHLNVLIKHKTQETNRLEGASKAIANNIQ
MHIKFLETQIKEIEQLINDHIKNNKDLHNKAMLLESIPGIGAKTQAIVLAFLADIEKFSSAKQVVAFVGLNPKHRQSGSS
VRGASRISRTGNSDLRKSFYMPAMSALRHNCIIKHFSQRLSNTGKPKMLILTAAMRKLLHIIYGVLKHNSPFNLNVSIQQ
K

Sequences:

>Translated_321_residues
MNSIVVGIDISKETFDAAVLINNKVQTRKFNNSSEGFNKLVTWLKSRGSGHVCMEATGIYWKNLAKYLYDYGYKVSVVNP
ARIKGFAMSKLSRTKTDKADSVLIIADFCKAMKPEVWYPQPIYIQELQQLVNHLNVLIKHKTQETNRLEGASKAIANNIQ
MHIKFLETQIKEIEQLINDHIKNNKDLHNKAMLLESIPGIGAKTQAIVLAFLADIEKFSSAKQVVAFVGLNPKHRQSGSS
VRGASRISRTGNSDLRKSFYMPAMSALRHNCIIKHFSQRLSNTGKPKMLILTAAMRKLLHIIYGVLKHNSPFNLNVSIQQ
K
>Mature_321_residues
MNSIVVGIDISKETFDAAVLINNKVQTRKFNNSSEGFNKLVTWLKSRGSGHVCMEATGIYWKNLAKYLYDYGYKVSVVNP
ARIKGFAMSKLSRTKTDKADSVLIIADFCKAMKPEVWYPQPIYIQELQQLVNHLNVLIKHKTQETNRLEGASKAIANNIQ
MHIKFLETQIKEIEQLINDHIKNNKDLHNKAMLLESIPGIGAKTQAIVLAFLADIEKFSSAKQVVAFVGLNPKHRQSGSS
VRGASRISRTGNSDLRKSFYMPAMSALRHNCIIKHFSQRLSNTGKPKMLILTAAMRKLLHIIYGVLKHNSPFNLNVSIQQ
K

Specific function: May be the site-specific invertase required for pilin gene inversion. Moraxella can express either a Q or I pilin; the inversion of 2 kb of DNA determines which pilin is expressed [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 36180; Mature: 36180

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIVVGIDISKETFDAAVLINNKVQTRKFNNSSEGFNKLVTWLKSRGSGHVCMEATGIY
CCCEEEEEECCCHHHCEEEEECCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCHH
WKNLAKYLYDYGYKVSVVNPARIKGFAMSKLSRTKTDKADSVLIIADFCKAMKPEVWYPQ
HHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCCCCC
PIYIQELQQLVNHLNVLIKHKTQETNRLEGASKAIANNIQMHIKFLETQIKEIEQLINDH
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKNNKDLHNKAMLLESIPGIGAKTQAIVLAFLADIEKFSSAKQVVAFVGLNPKHRQSGSS
HCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCC
VRGASRISRTGNSDLRKSFYMPAMSALRHNCIIKHFSQRLSNTGKPKMLILTAAMRKLLH
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHH
IIYGVLKHNSPFNLNVSIQQK
HHHHHHHCCCCCEEEEEEECC
>Mature Secondary Structure
MNSIVVGIDISKETFDAAVLINNKVQTRKFNNSSEGFNKLVTWLKSRGSGHVCMEATGIY
CCCEEEEEECCCHHHCEEEEECCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCHH
WKNLAKYLYDYGYKVSVVNPARIKGFAMSKLSRTKTDKADSVLIIADFCKAMKPEVWYPQ
HHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCCCCC
PIYIQELQQLVNHLNVLIKHKTQETNRLEGASKAIANNIQMHIKFLETQIKEIEQLINDH
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKNNKDLHNKAMLLESIPGIGAKTQAIVLAFLADIEKFSSAKQVVAFVGLNPKHRQSGSS
HCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCC
VRGASRISRTGNSDLRKSFYMPAMSALRHNCIIKHFSQRLSNTGKPKMLILTAAMRKLLH
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHH
IIYGVLKHNSPFNLNVSIQQK
HHHHHHHCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2403542 [H]