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The map label for this gene is noc [H]

Identifier: 148269140

GI number: 148269140

Start: 2900849

End: 2901688

Strand: Reverse

Name: noc [H]

Synonym: SaurJH9_2731

Alternate gene names: 148269140

Gene position: 2901688-2900849 (Counterclockwise)

Preceding gene: 148269141

Following gene: 148269139

Centisome position: 99.83

GC content: 35.36

Gene sequence:

>840_bases
ATGAAAAAACCTTTTTCAAAATTATTTGGTTTGAAAAACAAAGATGACATCATTGGACATATTGAAGAAGATCGCAATAG
TAATGTTGAATCCATTCAAATTGAACGTATCGTTCCCAACCGTTATCAACCAAGACAGGTGTTTGAACCAAATAAAATTA
AAGAACTTGCTGAATCAATACATGAACATGGTTTACTACAACCTATTGTTGTAAGACCGATTGAAGAAGATATGTTTGAA
ATTATTGCTGGAGAGCGCCGATTTAGAGCAATACAATCACTAAATTTACCTCAAGCAGACGTTATTATTCGTGATATGGA
TGATGAAGAGACGGCTGTTGTTGCATTAATTGAGAATATTCAAAGAGAAAATTTGTCTGTTGTTGAAGAAGCGGAAGCCT
ATAAGAAATTATTGGAAATTGGTGATACAACGCAAAGTGAATTGGCAAAAAGTTTAGGTAAAAGTCAAAGCTTTATTGCA
AATAAGTTGCGTTTATTGAAGTTGGCGCCGAAAGTACTACTTCGCTTAAGAGAAGGTAAAATTACTGAACGCCATGCGAG
AGCGGTATTATCATTGTCTGATAGTGAACAAGAAGCGTTGATTGAGCAAGTCATTGCACAAAAACTAAATGTGAAACAGA
CTGAAGATAGAGTACGCCAAAAAACGGGGCCCGAAAAAGTCAAAGCACAAAACCTTCGCTTTGCACAAGATGTCACTCAA
GCACGAGATGAGGTAGGCAAAAGTATCCAAGCGATTCAACAAACAGGACTACATGTTGAGCATAAAGACAAAGATCATGA
AGATTATTATGAAATAAAAATTCGAATATATAAACGTTAG

Upstream 100 bases:

>100_bases
GAAAAAGTACCCAAGAAAACCAGGGACGCCTAATAAGACTCCTTTACTTGAAAAATAATGCATAATCCTTTACAACTAAC
ATAAAAGGAGCGAATGGATA

Downstream 100 bases:

>100_bases
TAGTAGGATGTCGTATACATGATGACTAACACATAAAAGACAAAGCTAAGATCATAACAGCTTTGTCTTTTTTTGTTTTA
CGTGAAACATAAAAATTTAT

Product: parB-like partition protein

Products: NA

Alternate protein names: Noc [H]

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKKPFSKLFGLKNKDDIIGHIEEDRNSNVESIQIERIVPNRYQPRQVFEPNKIKELAESIHEHGLLQPIVVRPIEEDMFE
IIAGERRFRAIQSLNLPQADVIIRDMDDEETAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIA
NKLRLLKLAPKVLLRLREGKITERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRVRQKTGPEKVKAQNLRFAQDVTQ
ARDEVGKSIQAIQQTGLHVEHKDKDHEDYYEIKIRIYKR

Sequences:

>Translated_279_residues
MKKPFSKLFGLKNKDDIIGHIEEDRNSNVESIQIERIVPNRYQPRQVFEPNKIKELAESIHEHGLLQPIVVRPIEEDMFE
IIAGERRFRAIQSLNLPQADVIIRDMDDEETAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIA
NKLRLLKLAPKVLLRLREGKITERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRVRQKTGPEKVKAQNLRFAQDVTQ
ARDEVGKSIQAIQQTGLHVEHKDKDHEDYYEIKIRIYKR
>Mature_279_residues
MKKPFSKLFGLKNKDDIIGHIEEDRNSNVESIQIERIVPNRYQPRQVFEPNKIKELAESIHEHGLLQPIVVRPIEEDMFE
IIAGERRFRAIQSLNLPQADVIIRDMDDEETAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIA
NKLRLLKLAPKVLLRLREGKITERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRVRQKTGPEKVKAQNLRFAQDVTQ
ARDEVGKSIQAIQQTGLHVEHKDKDHEDYYEIKIRIYKR

Specific function: Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division an

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32197; Mature: 32197

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPFSKLFGLKNKDDIIGHIEEDRNSNVESIQIERIVPNRYQPRQVFEPNKIKELAESI
CCCCHHHHCCCCCCCHHHCCCHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHH
HEHGLLQPIVVRPIEEDMFEIIAGERRFRAIQSLNLPQADVIIRDMDDEETAVVALIENI
HHCCCCCHHHHCCCHHHHHHHHHCHHHHHHHHHCCCCCHHEEEECCCCCHHHHHHHHHHH
QRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIANKLRLLKLAPKVLLRLREGK
HHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
ITERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRVRQKTGPEKVKAQNLRFAQDVTQ
CHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ARDEVGKSIQAIQQTGLHVEHKDKDHEDYYEIKIRIYKR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MKKPFSKLFGLKNKDDIIGHIEEDRNSNVESIQIERIVPNRYQPRQVFEPNKIKELAESI
CCCCHHHHCCCCCCCHHHCCCHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHH
HEHGLLQPIVVRPIEEDMFEIIAGERRFRAIQSLNLPQADVIIRDMDDEETAVVALIENI
HHCCCCCHHHHCCCHHHHHHHHHCHHHHHHHHHCCCCCHHEEEECCCCCHHHHHHHHHHH
QRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIANKLRLLKLAPKVLLRLREGK
HHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
ITERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRVRQKTGPEKVKAQNLRFAQDVTQ
CHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ARDEVGKSIQAIQQTGLHVEHKDKDHEDYYEIKIRIYKR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]