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The map label for this gene is yizB [H]

Identifier: 148269125

GI number: 148269125

Start: 2887244

End: 2887582

Strand: Reverse

Name: yizB [H]

Synonym: SaurJH9_2716

Alternate gene names: 148269125

Gene position: 2887582-2887244 (Counterclockwise)

Preceding gene: 148269128

Following gene: 148269124

Centisome position: 99.34

GC content: 35.99

Gene sequence:

>339_bases
ATGTCAGTGTCAGATCAGATTATGAAAGGTCTCTTAGATGGGGCGATATTAGGTCTCATTGCCCAAGGCGAAACGTATGG
ATATGAAATTATGACGAAACTTAAGAATCAAGAGTTTCCAGAGATAAGTGAGGGTAGTATTTATCCAGTTTTAATGCGTT
TAAACAAAAAAGGATACGTTGATACGACAATAAAAAAATCTAGTAATGGCGGCCCGAGGCGGAAATACTATACGATTACC
GATTCAGGTTTAAAGGAACTAAAAGTATTTAAATCAAAATGGCAAGCTTTGAATAAAGGGATGATTAACTTGTTTGGAGG
GGAAAACGATGTTAACTAA

Upstream 100 bases:

>100_bases
TCATTTAAGGAATGTGTACAACAACTACCTTACAATAAAAGATAGTTGACGAAAAGTTCTCAATGTACTATCTTATTATG
TAAGATAGTAGGTGATTAAA

Downstream 100 bases:

>100_bases
ACAATCTCAAGATTTTTTAGAAAAATTACGTATTGAATTGTTATTTAGAGGTAAGACTGAAGCAGAAGTAGAAGAGTTAT
TGGAAGAGCTCGAAGATCAT

Product: PadR-like family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MSVSDQIMKGLLDGAILGLIAQGETYGYEIMTKLKNQEFPEISEGSIYPVLMRLNKKGYVDTTIKKSSNGGPRRKYYTIT
DSGLKELKVFKSKWQALNKGMINLFGGENDVN

Sequences:

>Translated_112_residues
MSVSDQIMKGLLDGAILGLIAQGETYGYEIMTKLKNQEFPEISEGSIYPVLMRLNKKGYVDTTIKKSSNGGPRRKYYTIT
DSGLKELKVFKSKWQALNKGMINLFGGENDVN
>Mature_111_residues
SVSDQIMKGLLDGAILGLIAQGETYGYEIMTKLKNQEFPEISEGSIYPVLMRLNKKGYVDTTIKKSSNGGPRRKYYTITD
SGLKELKVFKSKWQALNKGMINLFGGENDVN

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 12515; Mature: 12383

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSDQIMKGLLDGAILGLIAQGETYGYEIMTKLKNQEFPEISEGSIYPVLMRLNKKGYV
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCE
DTTIKKSSNGGPRRKYYTITDSGLKELKVFKSKWQALNKGMINLFGGENDVN
EEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCC
>Mature Secondary Structure 
SVSDQIMKGLLDGAILGLIAQGETYGYEIMTKLKNQEFPEISEGSIYPVLMRLNKKGYV
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCE
DTTIKKSSNGGPRRKYYTITDSGLKELKVFKSKWQALNKGMINLFGGENDVN
EEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]