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The map label for this gene is secY [H]

Identifier: 148269086

GI number: 148269086

Start: 2845853

End: 2847064

Strand: Reverse

Name: secY [H]

Synonym: SaurJH9_2677

Alternate gene names: 148269086

Gene position: 2847064-2845853 (Counterclockwise)

Preceding gene: 148269087

Following gene: 148269085

Centisome position: 97.95

GC content: 28.63

Gene sequence:

>1212_bases
ATGTTAAAACTTTTACAACAATACGAATATAAAATTATATATAAACGTATGCTATACACATGTTTTATATTATTTATTTA
TATATTAGGTACAAACATTTCCATCGTTTCCTATAACGATATGCAAGTAAAACATGAGTCATTTTTTAAAATAGCTATTT
CTAATATGGGTGGAGACGTTAATACTTTAAACATTTTCACTTTAGGATTAGTTCCGTGGTTAACATCAATGATTATCTTG
ATGCTGATTTCTTATCGGAATATGGATAAATACATGAAACAAACAAGTCTTGAGAAGCATTATAAAGAGCGTATCTTAAC
ATTAATTTTAAGTGTGATTCAAAGTTATTTTGTGATTCATGAATATGTTTCGAAAGAACGTGTTCATCAAGACAATATTT
ACTTAACAATATTGATTTTGGTTACTGGAACGATGTTATTAGTTTGGTTAGCTGACAAAAATAGTCGTTACGGCATCGCA
GGACCAATGCCGATTGTAATGGTTAGCATTATTAAATCAATGATGCATCAAAAAATGGAATATATAGATGCAAGTCATAT
TGTGATTGCGTTGTTAATCATCCTTGTGATAATCACATTGTTTATCTTATTATTCATTGAATTAGTAGAAGTGAGAATAC
CATATATCGATTTAATGAACGTTTCCGCAACAAATATGAAATCTTATTTATCTTGGAAAGTTAACCCTGCAGGCAGTATT
ACTTTAATGATGAGTATTTCAGCATTTGTTTTCTTGAAAAGTGGCATTCATTTTATTTTATCTATGTTTAATAAAAGCAT
ATCAGATGACATGCCAATGCTGACATTTGATAGTCCAGTAGGTATTTCAGTATATTTAGTGATTCAAATGTTATTGGGTT
ATTTTTTATCGAGATTTTTAATCAATACTAAACAAAAATCCAAAGATTTCTTAAAGAGTGGCAATTATTTTTCAGGAGTT
AAACCTGGTAAGGATACAGAACGTTATTTAAATTATCAAGCAAGACGCGTATGTTGGTTTGGATCGGCATTAGTTACAGT
CATTATTGGTATACCGCTTTATTTCACATTGTTTGTACCGCATTTATCTACTGAAATTTATTTCTCAGTACAACTGATTG
TATTAGTTTACATCAGTATTAATATTGCAGAAACAATTCGTACATATTTATATTTTGATAAATATAAGCCATTTTTAAAC
CAGTATTGGTAA

Upstream 100 bases:

>100_bases
AGACTGAGGCACCAATCACTAGAAAAATCGATATAGGATTTTAATAATTAGTGATGAACCCTTAGTCTTTTTAATGTTTT
TGATATAAAAGAGGTGCAAC

Downstream 100 bases:

>100_bases
GGAGGTAATTATGAAATACTTTATTCCAGCTTGGTACGATGACCAACGATGGTGGCAAGACACGACTGTGCCGTATTATC
AACTACAAAATAAGACGGAA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MLKLLQQYEYKIIYKRMLYTCFILFIYILGTNISIVSYNDMQVKHESFFKIAISNMGGDVNTLNIFTLGLVPWLTSMIIL
MLISYRNMDKYMKQTSLEKHYKERILTLILSVIQSYFVIHEYVSKERVHQDNIYLTILILVTGTMLLVWLADKNSRYGIA
GPMPIVMVSIIKSMMHQKMEYIDASHIVIALLIILVIITLFILLFIELVEVRIPYIDLMNVSATNMKSYLSWKVNPAGSI
TLMMSISAFVFLKSGIHFILSMFNKSISDDMPMLTFDSPVGISVYLVIQMLLGYFLSRFLINTKQKSKDFLKSGNYFSGV
KPGKDTERYLNYQARRVCWFGSALVTVIIGIPLYFTLFVPHLSTEIYFSVQLIVLVYISINIAETIRTYLYFDKYKPFLN
QYW

Sequences:

>Translated_403_residues
MLKLLQQYEYKIIYKRMLYTCFILFIYILGTNISIVSYNDMQVKHESFFKIAISNMGGDVNTLNIFTLGLVPWLTSMIIL
MLISYRNMDKYMKQTSLEKHYKERILTLILSVIQSYFVIHEYVSKERVHQDNIYLTILILVTGTMLLVWLADKNSRYGIA
GPMPIVMVSIIKSMMHQKMEYIDASHIVIALLIILVIITLFILLFIELVEVRIPYIDLMNVSATNMKSYLSWKVNPAGSI
TLMMSISAFVFLKSGIHFILSMFNKSISDDMPMLTFDSPVGISVYLVIQMLLGYFLSRFLINTKQKSKDFLKSGNYFSGV
KPGKDTERYLNYQARRVCWFGSALVTVIIGIPLYFTLFVPHLSTEIYFSVQLIVLVYISINIAETIRTYLYFDKYKPFLN
QYW
>Mature_403_residues
MLKLLQQYEYKIIYKRMLYTCFILFIYILGTNISIVSYNDMQVKHESFFKIAISNMGGDVNTLNIFTLGLVPWLTSMIIL
MLISYRNMDKYMKQTSLEKHYKERILTLILSVIQSYFVIHEYVSKERVHQDNIYLTILILVTGTMLLVWLADKNSRYGIA
GPMPIVMVSIIKSMMHQKMEYIDASHIVIALLIILVIITLFILLFIELVEVRIPYIDLMNVSATNMKSYLSWKVNPAGSI
TLMMSISAFVFLKSGIHFILSMFNKSISDDMPMLTFDSPVGISVYLVIQMLLGYFLSRFLINTKQKSKDFLKSGNYFSGV
KPGKDTERYLNYQARRVCWFGSALVTVIIGIPLYFTLFVPHLSTEIYFSVQLIVLVYISINIAETIRTYLYFDKYKPFLN
QYW

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 46902; Mature: 46902

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLLQQYEYKIIYKRMLYTCFILFIYILGTNISIVSYNDMQVKHESFFKIAISNMGGDV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHEECCCCCCC
NTLNIFTLGLVPWLTSMIILMLISYRNMDKYMKQTSLEKHYKERILTLILSVIQSYFVIH
EEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYVSKERVHQDNIYLTILILVTGTMLLVWLADKNSRYGIAGPMPIVMVSIIKSMMHQKME
HHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
YIDASHIVIALLIILVIITLFILLFIELVEVRIPYIDLMNVSATNMKSYLSWKVNPAGSI
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHEEEECCCCCE
TLMMSISAFVFLKSGIHFILSMFNKSISDDMPMLTFDSPVGISVYLVIQMLLGYFLSRFL
EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
INTKQKSKDFLKSGNYFSGVKPGKDTERYLNYQARRVCWFGSALVTVIIGIPLYFTLFVP
HCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLSTEIYFSVQLIVLVYISINIAETIRTYLYFDKYKPFLNQYW
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC
>Mature Secondary Structure
MLKLLQQYEYKIIYKRMLYTCFILFIYILGTNISIVSYNDMQVKHESFFKIAISNMGGDV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHEECCCCCCC
NTLNIFTLGLVPWLTSMIILMLISYRNMDKYMKQTSLEKHYKERILTLILSVIQSYFVIH
EEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYVSKERVHQDNIYLTILILVTGTMLLVWLADKNSRYGIAGPMPIVMVSIIKSMMHQKME
HHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
YIDASHIVIALLIILVIITLFILLFIELVEVRIPYIDLMNVSATNMKSYLSWKVNPAGSI
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHEEEECCCCCE
TLMMSISAFVFLKSGIHFILSMFNKSISDDMPMLTFDSPVGISVYLVIQMLLGYFLSRFL
EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
INTKQKSKDFLKSGNYFSGVKPGKDTERYLNYQARRVCWFGSALVTVIIGIPLYFTLFVP
HCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLSTEIYFSVQLIVLVYISINIAETIRTYLYFDKYKPFLNQYW
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]