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The map label for this gene is sdaAA [H]

Identifier: 148268964

GI number: 148268964

Start: 2701465

End: 2702364

Strand: Reverse

Name: sdaAA [H]

Synonym: SaurJH9_2554

Alternate gene names: 148268964

Gene position: 2702364-2701465 (Counterclockwise)

Preceding gene: 148268965

Following gene: 148268963

Centisome position: 92.97

GC content: 41.11

Gene sequence:

>900_bases
ATGTTTGATTCAATTAGAGAGACTATAGATTATGCCGTAGAAAATAATATGTCATTTGCGGATATCATGGTTAAAGAAGA
AATGGAATTAAGCGGTAAATCACGTGATGAAGTGCGAGCGCAAATGAAACAAAATTTAGATGTCATGCGAGACGCAGTAA
TCAAAGGGACGACAGGTGATGGCGTTGAAAGTGTAACGGGCTACACTGGTCATGACGCTGCTAAACTACGTGATTATAAT
GAAACACATCATGCTTTGTCTGGATATGAAATGATTGATGCAGTCAAAGGTGCCATTGCAACAAATGAAGTCAATGCTGC
GATGGGTATTATTTGTGCAACGCCAACAGCTGGTTCCTCGGGTACCATTCCCGGTGCACTTTTTAAATTAGAAAAAACAC
ATGATTTAACAGAAGAGCAAATGATTGATTTCTTATTCACTTCAGCATTGTTTGGGCGTGTCGTAGCAAACAATGCAAGT
GTAGCTGGTGCAACAGGTGGCTGCCAAGCTGAAGTTGGTTCAGCATCTGCAATGGCCGCAGCTGCAGCAGTAGCTATATT
CGGAGGATCACCAGAAGCATCCGGGCACGCTATGGCATTAGCGATAAGTAATTTATTAGGTTTAGTTTGTGACCCAGTAG
CCGGACTTGTTGAAATTCCTTGTGTTATGAGAAATGCAATTGGTTCGGGTAACGCTTTAATTTCAGCAGATTTAGCATTA
GCAGGTATTGAAAGTAGAATACCTGTTGATGAAGTTATTGAAGCAATGGATAAGGTTGGTCGTAACCTTCCTGCATCATT
ACGTGAAACTGGATTGGGTGGACTAGCAGGCACACCAACTGGCGAAGCAATTAAACGTAAAATCTTTGGCACAGCTGAAG
ATATGGTTAAAAATAATTAA

Upstream 100 bases:

>100_bases
ATACCATTAAATAAAGCAATCTCAGAATCGACATTAAATACAATTAAAGAGAAATACAGTGACGTAAACGTTTCCTATAT
AAATTAGAGGGGGAATAAAC

Downstream 100 bases:

>100_bases
TGAGATAACAATAAGATATTGATAAAAAAGAAGCATCTGTCTGGATCATTAGTACCAGATAGATGCTTCTTAATTATCTT
TCATAAAGTTGAAAAATTTA

Product: L-serine dehydratase, iron-sulfur-dependent, alpha subunit

Products: NA

Alternate protein names: SDH; L-serine deaminase; L-SD [H]

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MFDSIRETIDYAVENNMSFADIMVKEEMELSGKSRDEVRAQMKQNLDVMRDAVIKGTTGDGVESVTGYTGHDAAKLRDYN
ETHHALSGYEMIDAVKGAIATNEVNAAMGIICATPTAGSSGTIPGALFKLEKTHDLTEEQMIDFLFTSALFGRVVANNAS
VAGATGGCQAEVGSASAMAAAAAVAIFGGSPEASGHAMALAISNLLGLVCDPVAGLVEIPCVMRNAIGSGNALISADLAL
AGIESRIPVDEVIEAMDKVGRNLPASLRETGLGGLAGTPTGEAIKRKIFGTAEDMVKNN

Sequences:

>Translated_299_residues
MFDSIRETIDYAVENNMSFADIMVKEEMELSGKSRDEVRAQMKQNLDVMRDAVIKGTTGDGVESVTGYTGHDAAKLRDYN
ETHHALSGYEMIDAVKGAIATNEVNAAMGIICATPTAGSSGTIPGALFKLEKTHDLTEEQMIDFLFTSALFGRVVANNAS
VAGATGGCQAEVGSASAMAAAAAVAIFGGSPEASGHAMALAISNLLGLVCDPVAGLVEIPCVMRNAIGSGNALISADLAL
AGIESRIPVDEVIEAMDKVGRNLPASLRETGLGGLAGTPTGEAIKRKIFGTAEDMVKNN
>Mature_299_residues
MFDSIRETIDYAVENNMSFADIMVKEEMELSGKSRDEVRAQMKQNLDVMRDAVIKGTTGDGVESVTGYTGHDAAKLRDYN
ETHHALSGYEMIDAVKGAIATNEVNAAMGIICATPTAGSSGTIPGALFKLEKTHDLTEEQMIDFLFTSALFGRVVANNAS
VAGATGGCQAEVGSASAMAAAAAVAIFGGSPEASGHAMALAISNLLGLVCDPVAGLVEIPCVMRNAIGSGNALISADLAL
AGIESRIPVDEVIEAMDKVGRNLPASLRETGLGGLAGTPTGEAIKRKIFGTAEDMVKNN

Specific function: Deaminates Also Threonine, Particularly When It Is Present In High Concentration. [C]

COG id: COG1760

COG function: function code E; L-serine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-sulfur dependent L-serine dehydratase family [H]

Homologues:

Organism=Escherichia coli, GI1789161, Length=280, Percent_Identity=34.2857142857143, Blast_Score=144, Evalue=7e-36,
Organism=Escherichia coli, GI48994925, Length=280, Percent_Identity=35.3571428571429, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1788116, Length=281, Percent_Identity=35.5871886120996, Blast_Score=139, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005130
- InterPro:   IPR004642 [H]

Pfam domain/function: PF03313 SDH_alpha [H]

EC number: =4.3.1.17 [H]

Molecular weight: Translated: 30972; Mature: 30972

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDSIRETIDYAVENNMSFADIMVKEEMELSGKSRDEVRAQMKQNLDVMRDAVIKGTTGD
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
GVESVTGYTGHDAAKLRDYNETHHALSGYEMIDAVKGAIATNEVNAAMGIICATPTAGSS
CHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHEEEEEECCCCCCC
GTIPGALFKLEKTHDLTEEQMIDFLFTSALFGRVVANNASVAGATGGCQAEVGSASAMAA
CCCCHHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
AAAVAIFGGSPEASGHAMALAISNLLGLVCDPVAGLVEIPCVMRNAIGSGNALISADLAL
HHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHH
AGIESRIPVDEVIEAMDKVGRNLPASLRETGLGGLAGTPTGEAIKRKIFGTAEDMVKNN
HCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure
MFDSIRETIDYAVENNMSFADIMVKEEMELSGKSRDEVRAQMKQNLDVMRDAVIKGTTGD
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
GVESVTGYTGHDAAKLRDYNETHHALSGYEMIDAVKGAIATNEVNAAMGIICATPTAGSS
CHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHEEEEEECCCCCCC
GTIPGALFKLEKTHDLTEEQMIDFLFTSALFGRVVANNASVAGATGGCQAEVGSASAMAA
CCCCHHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
AAAVAIFGGSPEASGHAMALAISNLLGLVCDPVAGLVEIPCVMRNAIGSGNALISADLAL
HHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHH
AGIESRIPVDEVIEAMDKVGRNLPASLRETGLGGLAGTPTGEAIKRKIFGTAEDMVKNN
HCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]