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The map label for this gene is ebpS [H]

Identifier: 148267964

GI number: 148267964

Start: 1643574

End: 1645034

Strand: Reverse

Name: ebpS [H]

Synonym: SaurJH9_1537

Alternate gene names: 148267964

Gene position: 1645034-1643574 (Counterclockwise)

Preceding gene: 148267965

Following gene: 148267963

Centisome position: 56.59

GC content: 36.69

Gene sequence:

>1461_bases
ATGTCTAATAATTTTAAAGATGACTTTGAAAAAAATCGTCAATCGATAGACACAAATTCACATCAAGACCATACGGAAGA
TGTTGAAAAAGACCAATCAGAATTAGAACATCAGGATACAATAGAGAATACGGAGCAACAGTTTCCGCCAAGAAATGCCC
AAAGAAGAAAAAGACGCCGTGATTTAGCAACGAATCATAATAAACAAGTTCACAATGAATCACAAACATCTGAAGACAAT
GTTCAAAATGAGGCTGGCACAATAGATGATCGTCAAGTCGAATCATCACACAGTACTGAAAGTCAAGAACCTAGCCATCA
AGACAGTACACCTCAACATGAAGAGGAATATTATAATAAGAATGCTTTTGCAATGGATAAATCACATCCAGAACCAATCG
AAGACAATGATAAACACGAGACTATTAAAGATGCAGAAAATAACACTGAGCATTCAACAGTTTCTGATAAGAGTAAAGCT
GAACAATCTCAGCAACCTAAACCATATTTTGCAACAGGTGCTAACCAAGCAAATACATCAAAAGATAAACATGATGATGT
AACTGTTAAGCAAGACAAAGATGAATCTAAAGATCATCATAGTGGTAAAAAAGGCGCAGCAATTGGTGCTGGAACAGCGG
GTGTTGCAGGTGCAGCTGGTGCAATGGGTGTTTCTAAAGCTAAGAAACATTCAAATGACGCTCAAAACAAAAGTAATTCT
GACAAGTCGAATAACTCGACTGAGGATAAAGCGTCTCAAGATAAGTCTAAAGATCATCATAATGGCAAAAAAGGTGCAGC
GATCGGTGCTGGAACAGCAGGTTTGGCTGGAGGCGCAGCAAGTAAAAGTGCTTCTGCCGCTTCAAAACCACATGCCTCTA
ATAATGCAAGCCAAAACCATGATGAACATGACAATCATGACAGAGATAAAGAACGTAAAAAAGGTGGCATGGCCAAAGTA
TTGTTACCATTAATTGCAGCTGTACTAATTATCGGTGCATTAGCGATATTTGGAGGCATGGCATTAAACAATCATAATAA
TGGTACAAAAGAAAATAAAATCGCGAATACAAATAAAAATAATGCTGATGAAAGTAAAGACAAAGACACATCTAAAGACG
CTTCTAAAGATAAATCAAAATCTACAGACAGTGATAAATCAAAAGAGGATCAAGACAAAGCGACTAAAGATGAATCTGAT
AATGATCAAAACAACGCTAATCAAGCGAACAATCAAGCACAAAATAATCAAAATCAACAACAAGCTAATCAAAATCAACA
ACAGCAACAACAACGTCAAGGTGGTGGCCAAAGACATACAGTGAATGGTCAAGAAAACTTATACCGTATCGCAATTCAAT
ACTACGGTTCAGGTTCACCGGAAAATGTTGAAAAAATTAGACGTGCCAATGGTTTAAGTGGTAACAATATTAGAAACGGT
CAACAAATCGTTATTCCATAA

Upstream 100 bases:

>100_bases
GAAAAATGATTGAAATAATTTTGAAAAATATACATAAACATATGTCATGTGGGTATATTTTATGTAAAATCATTGTAATA
GAATAGAAAGGAAGATGGCT

Downstream 100 bases:

>100_bases
TATAACTATATAAATTGTAACTGAACTGCTATATACAAACGTGCATATTATAAGTATCTCTAAATATTTTGGAGAACTTA
AATTGCGCTTATAAGTATGT

Product: peptidoglycan-binding LysM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 485

Protein sequence:

>486_residues
MSNNFKDDFEKNRQSIDTNSHQDHTEDVEKDQSELEHQDTIENTEQQFPPRNAQRRKRRRDLATNHNKQVHNESQTSEDN
VQNEAGTIDDRQVESSHSTESQEPSHQDSTPQHEEEYYNKNAFAMDKSHPEPIEDNDKHETIKDAENNTEHSTVSDKSKA
EQSQQPKPYFATGANQANTSKDKHDDVTVKQDKDESKDHHSGKKGAAIGAGTAGVAGAAGAMGVSKAKKHSNDAQNKSNS
DKSNNSTEDKASQDKSKDHHNGKKGAAIGAGTAGLAGGAASKSASAASKPHASNNASQNHDEHDNHDRDKERKKGGMAKV
LLPLIAAVLIIGALAIFGGMALNNHNNGTKENKIANTNKNNADESKDKDTSKDASKDKSKSTDSDKSKEDQDKATKDESD
NDQNNANQANNQAQNNQNQQQANQNQQQQQQRQGGGQRHTVNGQENLYRIAIQYYGSGSPENVEKIRRANGLSGNNIRNG
QQIVIP

Sequences:

>Translated_486_residues
MSNNFKDDFEKNRQSIDTNSHQDHTEDVEKDQSELEHQDTIENTEQQFPPRNAQRRKRRRDLATNHNKQVHNESQTSEDN
VQNEAGTIDDRQVESSHSTESQEPSHQDSTPQHEEEYYNKNAFAMDKSHPEPIEDNDKHETIKDAENNTEHSTVSDKSKA
EQSQQPKPYFATGANQANTSKDKHDDVTVKQDKDESKDHHSGKKGAAIGAGTAGVAGAAGAMGVSKAKKHSNDAQNKSNS
DKSNNSTEDKASQDKSKDHHNGKKGAAIGAGTAGLAGGAASKSASAASKPHASNNASQNHDEHDNHDRDKERKKGGMAKV
LLPLIAAVLIIGALAIFGGMALNNHNNGTKENKIANTNKNNADESKDKDTSKDASKDKSKSTDSDKSKEDQDKATKDESD
NDQNNANQANNQAQNNQNQQQANQNQQQQQQRQGGGQRHTVNGQENLYRIAIQYYGSGSPENVEKIRRANGLSGNNIRNG
QQIVIP
>Mature_485_residues
SNNFKDDFEKNRQSIDTNSHQDHTEDVEKDQSELEHQDTIENTEQQFPPRNAQRRKRRRDLATNHNKQVHNESQTSEDNV
QNEAGTIDDRQVESSHSTESQEPSHQDSTPQHEEEYYNKNAFAMDKSHPEPIEDNDKHETIKDAENNTEHSTVSDKSKAE
QSQQPKPYFATGANQANTSKDKHDDVTVKQDKDESKDHHSGKKGAAIGAGTAGVAGAAGAMGVSKAKKHSNDAQNKSNSD
KSNNSTEDKASQDKSKDHHNGKKGAAIGAGTAGLAGGAASKSASAASKPHASNNASQNHDEHDNHDRDKERKKGGMAKVL
LPLIAAVLIIGALAIFGGMALNNHNNGTKENKIANTNKNNADESKDKDTSKDASKDKSKSTDSDKSKEDQDKATKDESDN
DQNNANQANNQAQNNQNQQQANQNQQQQQQRQGGGQRHTVNGQENLYRIAIQYYGSGSPENVEKIRRANGLSGNNIRNGQ
QIVIP

Specific function: Promotes binding of soluble elastin peptides and tropoelastin to S.aureus cells although it is not able to promote bacterial adherence to immobilized elastin and, therefore, is not a microbial surface component recognizing adhesive matrix molecule (MSCRAM

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 53197; Mature: 53066

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNFKDDFEKNRQSIDTNSHQDHTEDVEKDQSELEHQDTIENTEQQFPPRNAQRRKRRR
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
DLATNHNKQVHNESQTSEDNVQNEAGTIDDRQVESSHSTESQEPSHQDSTPQHEEEYYNK
HHHHCCCHHHHCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCC
NAFAMDKSHPEPIEDNDKHETIKDAENNTEHSTVSDKSKAEQSQQPKPYFATGANQANTS
CCEEECCCCCCCCCCCCHHHHHHHCCCCCCCCHHCHHHHHHHHCCCCCCEECCCCCCCCC
KDKHDDVTVKQDKDESKDHHSGKKGAAIGAGTAGVAGAAGAMGVSKAKKHSNDAQNKSNS
CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCC
DKSNNSTEDKASQDKSKDHHNGKKGAAIGAGTAGLAGGAASKSASAASKPHASNNASQNH
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCHHCCCCCCCCCCCCCC
DEHDNHDRDKERKKGGMAKVLLPLIAAVLIIGALAIFGGMALNNHNNGTKENKIANTNKN
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCC
NADESKDKDTSKDASKDKSKSTDSDKSKEDQDKATKDESDNDQNNANQANNQAQNNQNQQ
CCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHH
QANQNQQQQQQRQGGGQRHTVNGQENLYRIAIQYYGSGSPENVEKIRRANGLSGNNIRNG
HHHHHHHHHHHHHCCCCEEECCCHHCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC
QQIVIP
CEEECC
>Mature Secondary Structure 
SNNFKDDFEKNRQSIDTNSHQDHTEDVEKDQSELEHQDTIENTEQQFPPRNAQRRKRRR
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
DLATNHNKQVHNESQTSEDNVQNEAGTIDDRQVESSHSTESQEPSHQDSTPQHEEEYYNK
HHHHCCCHHHHCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCC
NAFAMDKSHPEPIEDNDKHETIKDAENNTEHSTVSDKSKAEQSQQPKPYFATGANQANTS
CCEEECCCCCCCCCCCCHHHHHHHCCCCCCCCHHCHHHHHHHHCCCCCCEECCCCCCCCC
KDKHDDVTVKQDKDESKDHHSGKKGAAIGAGTAGVAGAAGAMGVSKAKKHSNDAQNKSNS
CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCC
DKSNNSTEDKASQDKSKDHHNGKKGAAIGAGTAGLAGGAASKSASAASKPHASNNASQNH
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCHHCCCCCCCCCCCCCC
DEHDNHDRDKERKKGGMAKVLLPLIAAVLIIGALAIFGGMALNNHNNGTKENKIANTNKN
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCC
NADESKDKDTSKDASKDKSKSTDSDKSKEDQDKATKDESDNDQNNANQANNQAQNNQNQQ
CCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHH
QANQNQQQQQQRQGGGQRHTVNGQENLYRIAIQYYGSGSPENVEKIRRANGLSGNNIRNG
HHHHHHHHHHHHHCCCCEEECCCHHCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC
QQIVIP
CEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA