| Definition | Staphylococcus aureus subsp. aureus JH9, complete genome. |
|---|---|
| Accession | NC_009487 |
| Length | 2,906,700 |
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The map label for this gene is 148267487
Identifier: 148267487
GI number: 148267487
Start: 1092029
End: 1094476
Strand: Direct
Name: 148267487
Synonym: SaurJH9_1053
Alternate gene names: NA
Gene position: 1092029-1094476 (Clockwise)
Preceding gene: 148267486
Following gene: 148267488
Centisome position: 37.57
GC content: 35.13
Gene sequence:
>2448_bases ATGTTAGACAAAGTCACTCAAATAGAAACAATTAAATATGATCGTGATGTCTCATATTCTTATGCTGCTAGTCGTTTATC CACATATTGGACTAATCACAATATGGCTTGGTCTGACTTTATGCAGAAGCTAGCACAAACAGTTAGAACTAAAGAAGATT TAACTGAGTACAATAAAATGTCTAAGTCTGAACAAGCCGATATAAAAGATGTTGGCGGATTTGTCGGTGGATATTTAAAA GAAGGCAAACGGCGTGCTGGTCAAGTCATGAATCGTTCAATGCTAACACTTGATATCGATTATGCTGCTCAAGATATGAC TGACATATTATCTATGTTTTATGATTTTGCATATTGTTTATATTCAACACATAAGCATAGAGAGATAAGTCCAAGACTGC GTTTAGTGATTCCTTTAAAACGAAATGTAAATGCAGATGAGTATGAAGCTATTGGGCGTAAAGTCGCAGATATCGTTGGC ATGGATTACTTCGATGATACAACTTATCAACCACATAGGCTAATGTATTGGCCTTCAACTAGTAACGATGCGGAATTTTT CTTTACGTATGAAGATTTACCTTTGTTAGATCCAGATACAATATTAAATGAATATGTTGATTGGACTGACACATTAGAAT GGCCAACGTCTTCAAAGGAAGAGAGTAAGACTAAAAGATTAGCAGATAAGCAAGGTGACCCAGAAGAAAAGCCGGGAATT GTTGGCGCATTTTGTAGAGCCTATACGATAGAAGAAGCTATATCAACTTTTATTCCTGACTTATACGAAAAACATTCTAC TAACCGTTATACCTATCATGAAGGTTCAACTGCAGGTGGATTGGTGTTATACGAAAATAACAAGTTTGCCTATTCTCATC ATAATACGGATCCCGTAAGCGGTATGCTTGTGAACAGTTTTGATTTAGTACGCATACACTTATATGGTGCTCAAGATGAA GACGCTAAAACAGATACTCCGGTTAATCGACTACCTAGTTATAAAGCAATGCAGCAAAGAGCGCAAAATGATGAAGTTGT TAAAAAGCAATTAATTAACGACAAAATGTCTGATGCAATGCAGGATTTCGATGAAATAGTAAATAGCGATGATGCATGGT CTGAGACGTTAGAAATTACTTCGAAAGGTACTTTCAAAGCTAGTATCCCAAATATAGAAATTATATTGCGTAATGATCCA AATTTAAAAGGAAAAATAGCATTTAATGAATTTACAAAACAAATTGAATGCTTAGGGAAAGTGCCATGGAATACTAATTT TAAGACACGTCAATGGCAAGACGGTGATGATAGCAGTTTAAGAAGTTATATCGAAAAGATTTATGACATACACCATTCAG GTAAAACAAAAGATGCCATTATAAGCGTAGCAATGCAAAATGCTTATCATCCAGTAAGGGATTATCTAAATAAAATATCG TGGGATGGACATAAACGTCTTGAAAAGTTATTTATCAAATACTTAGGTGTTGAAGATACTGAAGTGAATAGAACAACTAC CAAAAAAGCATTGACTGCTGGAATTGCTCGAGTAATGGAGCCTGGATGTAAATTTGACTATATGCTTACACTTTATGGTC CTCAAGGTGTAGGTAAATCTGCTTTGCTAAAAAAATTAGGTGGTGCATGGTTTTCTGACAGTTTAGTTTCTGTTACAGGT AAAGAAGCCTATGAGGCCTTACAAGGCGTTTGGCTAATGGAAATGGCAGAACTTGCAGCTACAAGAAAAGCTGAAGTTGA AGCTATTAAGCATTTCATATCTAAACAAGTTGACCGGTTTCGTGTTGCTTATGGACATTATATTGAAGATTTTCCAAGGC AATGTATTTTCATTGGTACAACTAATAAAGTTGATTTCTTAAGAGATGAAACTGGTGGAAGACGTTTTTGGCCAATGACT GTAAATCCAGAGAGAGTTGAAGTGAACTGGTCTAAACTAACAAAAGATGAGATTGACCAAATTTGGGCAGAAGCTAAATA CTATTATGAACAAGGAGAAGAGTTATTCCTTAACCCTGAACTAGAAGAAGCAATGCGTTCAATACAAAGCAAACATACTG AGGAATCCCCATATACAGGTATTATTGATGAATATCTTAACACACCAATTCCTAGCAATTGGGATGACCTAACTATCTTT GAACGAAGACGATTTTATCAAGGTGATGTTGATATGTTACCAACAGGAAATGTAGATTACGTTGAAAGAAATAAGGTCTG TGCGCTTGAAGTGTTTGTTGAATGTTTTGGTAAAGATAAGGGAGATAGTAGAGGATCTATGGAAATTAGAAAGATTTCAA ACATCTTAAGACAATTAGACAATTGGTCTGTATATGATGGTAATAAAAGTGGGAAAATTCGATTCGGAAAAGATTATGGT GTACAGATAGCGTATGTAAGAGATGAAAGTTTAGAGGATTTAATATAA
Upstream 100 bases:
>100_bases TTTCATTTTCGTATTTATCATAAATGATTTCGCGTAAAGTTTTCAAAATTTGTCACCTCTTTAATTTTATTAAATTAATT ATACAAGAAAGGAGCCGAAT
Downstream 100 bases:
>100_bases GAAATATTGAATAAATATACATTTTTAGATGTTGTATCAAATGTTGCATCATTTTTTGAGTGATGCAACACGGTGGTGTA AAAAGTAATCTTAGGTGTTG
Product: virulence-associated E family protein
Products: NA
Alternate protein names: Virulence-Associated Protein E; Virulence-Associated E; DNA Primase Domain Protein; Prophage Ps2 Protein; Prophage Lp3 Helicase; Phage Protein; Phage-Like Protein; TraC Domain-Containing Protein; Virulence-Associated Protein E Family Protein; Phage Integrase Protein; Phage-Related Virulence-Associated Protein E; Primase C Terminal 2 Family; Pyocin R2_PP TraC Domain Protein; APSE-2 Prophage; P-Loop ATPase And Inactivated Derivative; Imidazoleglycerol Phosphate Synthase; Virulence-Associated E Domain Protein; P-Loop ATPase And Inactivated Derivatives-Like; Virulence-Associated Protein E Domain-Containing Protein; Helicase; P-Loop ATPase And Inactivated Derivatives-Like Protein; DNA Primase Domain-Containing Protein
Number of amino acids: Translated: 815; Mature: 815
Protein sequence:
>815_residues MLDKVTQIETIKYDRDVSYSYAASRLSTYWTNHNMAWSDFMQKLAQTVRTKEDLTEYNKMSKSEQADIKDVGGFVGGYLK EGKRRAGQVMNRSMLTLDIDYAAQDMTDILSMFYDFAYCLYSTHKHREISPRLRLVIPLKRNVNADEYEAIGRKVADIVG MDYFDDTTYQPHRLMYWPSTSNDAEFFFTYEDLPLLDPDTILNEYVDWTDTLEWPTSSKEESKTKRLADKQGDPEEKPGI VGAFCRAYTIEEAISTFIPDLYEKHSTNRYTYHEGSTAGGLVLYENNKFAYSHHNTDPVSGMLVNSFDLVRIHLYGAQDE DAKTDTPVNRLPSYKAMQQRAQNDEVVKKQLINDKMSDAMQDFDEIVNSDDAWSETLEITSKGTFKASIPNIEIILRNDP NLKGKIAFNEFTKQIECLGKVPWNTNFKTRQWQDGDDSSLRSYIEKIYDIHHSGKTKDAIISVAMQNAYHPVRDYLNKIS WDGHKRLEKLFIKYLGVEDTEVNRTTTKKALTAGIARVMEPGCKFDYMLTLYGPQGVGKSALLKKLGGAWFSDSLVSVTG KEAYEALQGVWLMEMAELAATRKAEVEAIKHFISKQVDRFRVAYGHYIEDFPRQCIFIGTTNKVDFLRDETGGRRFWPMT VNPERVEVNWSKLTKDEIDQIWAEAKYYYEQGEELFLNPELEEAMRSIQSKHTEESPYTGIIDEYLNTPIPSNWDDLTIF ERRRFYQGDVDMLPTGNVDYVERNKVCALEVFVECFGKDKGDSRGSMEIRKISNILRQLDNWSVYDGNKSGKIRFGKDYG VQIAYVRDESLEDLI
Sequences:
>Translated_815_residues MLDKVTQIETIKYDRDVSYSYAASRLSTYWTNHNMAWSDFMQKLAQTVRTKEDLTEYNKMSKSEQADIKDVGGFVGGYLK EGKRRAGQVMNRSMLTLDIDYAAQDMTDILSMFYDFAYCLYSTHKHREISPRLRLVIPLKRNVNADEYEAIGRKVADIVG MDYFDDTTYQPHRLMYWPSTSNDAEFFFTYEDLPLLDPDTILNEYVDWTDTLEWPTSSKEESKTKRLADKQGDPEEKPGI VGAFCRAYTIEEAISTFIPDLYEKHSTNRYTYHEGSTAGGLVLYENNKFAYSHHNTDPVSGMLVNSFDLVRIHLYGAQDE DAKTDTPVNRLPSYKAMQQRAQNDEVVKKQLINDKMSDAMQDFDEIVNSDDAWSETLEITSKGTFKASIPNIEIILRNDP NLKGKIAFNEFTKQIECLGKVPWNTNFKTRQWQDGDDSSLRSYIEKIYDIHHSGKTKDAIISVAMQNAYHPVRDYLNKIS WDGHKRLEKLFIKYLGVEDTEVNRTTTKKALTAGIARVMEPGCKFDYMLTLYGPQGVGKSALLKKLGGAWFSDSLVSVTG KEAYEALQGVWLMEMAELAATRKAEVEAIKHFISKQVDRFRVAYGHYIEDFPRQCIFIGTTNKVDFLRDETGGRRFWPMT VNPERVEVNWSKLTKDEIDQIWAEAKYYYEQGEELFLNPELEEAMRSIQSKHTEESPYTGIIDEYLNTPIPSNWDDLTIF ERRRFYQGDVDMLPTGNVDYVERNKVCALEVFVECFGKDKGDSRGSMEIRKISNILRQLDNWSVYDGNKSGKIRFGKDYG VQIAYVRDESLEDLI >Mature_815_residues MLDKVTQIETIKYDRDVSYSYAASRLSTYWTNHNMAWSDFMQKLAQTVRTKEDLTEYNKMSKSEQADIKDVGGFVGGYLK EGKRRAGQVMNRSMLTLDIDYAAQDMTDILSMFYDFAYCLYSTHKHREISPRLRLVIPLKRNVNADEYEAIGRKVADIVG MDYFDDTTYQPHRLMYWPSTSNDAEFFFTYEDLPLLDPDTILNEYVDWTDTLEWPTSSKEESKTKRLADKQGDPEEKPGI VGAFCRAYTIEEAISTFIPDLYEKHSTNRYTYHEGSTAGGLVLYENNKFAYSHHNTDPVSGMLVNSFDLVRIHLYGAQDE DAKTDTPVNRLPSYKAMQQRAQNDEVVKKQLINDKMSDAMQDFDEIVNSDDAWSETLEITSKGTFKASIPNIEIILRNDP NLKGKIAFNEFTKQIECLGKVPWNTNFKTRQWQDGDDSSLRSYIEKIYDIHHSGKTKDAIISVAMQNAYHPVRDYLNKIS WDGHKRLEKLFIKYLGVEDTEVNRTTTKKALTAGIARVMEPGCKFDYMLTLYGPQGVGKSALLKKLGGAWFSDSLVSVTG KEAYEALQGVWLMEMAELAATRKAEVEAIKHFISKQVDRFRVAYGHYIEDFPRQCIFIGTTNKVDFLRDETGGRRFWPMT VNPERVEVNWSKLTKDEIDQIWAEAKYYYEQGEELFLNPELEEAMRSIQSKHTEESPYTGIIDEYLNTPIPSNWDDLTIF ERRRFYQGDVDMLPTGNVDYVERNKVCALEVFVECFGKDKGDSRGSMEIRKISNILRQLDNWSVYDGNKSGKIRFGKDYG VQIAYVRDESLEDLI
Specific function: Unknown
COG id: COG5545
COG function: function code R; Predicted P-loop ATPase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94090; Mature: 94090
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00268 CECROPIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDKVTQIETIKYDRDVSYSYAASRLSTYWTNHNMAWSDFMQKLAQTVRTKEDLTEYNKM CCCCCCHHHEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SKSEQADIKDVGGFVGGYLKEGKRRAGQVMNRSMLTLDIDYAAQDMTDILSMFYDFAYCL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHH YSTHKHREISPRLRLVIPLKRNVNADEYEAIGRKVADIVGMDYFDDTTYQPHRLMYWPST HHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC SNDAEFFFTYEDLPLLDPDTILNEYVDWTDTLEWPTSSKEESKTKRLADKQGDPEEKPGI CCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCH VGAFCRAYTIEEAISTFIPDLYEKHSTNRYTYHEGSTAGGLVLYENNKFAYSHHNTDPVS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCEEEEECCCCCCCC GMLVNSFDLVRIHLYGAQDEDAKTDTPVNRLPSYKAMQQRAQNDEVVKKQLINDKMSDAM CEEECCEEEEEEEEECCCCCCCCCCCCHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH QDFDEIVNSDDAWSETLEITSKGTFKASIPNIEIILRNDPNLKGKIAFNEFTKQIECLGK HHHHHHHCCCCCHHHHHHCCCCCCEEEECCCEEEEEECCCCCCEEEEHHHHHHHHHHHHC VPWNTNFKTRQWQDGDDSSLRSYIEKIYDIHHSGKTKDAIISVAMQNAYHPVRDYLNKIS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCC WDGHKRLEKLFIKYLGVEDTEVNRTTTKKALTAGIARVMEPGCKFDYMLTLYGPQGVGKS CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHH ALLKKLGGAWFSDSLVSVTGKEAYEALQGVWLMEMAELAATRKAEVEAIKHFISKQVDRF HHHHHHCCCCCCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVAYGHYIEDFPRQCIFIGTTNKVDFLRDETGGRRFWPMTVNPERVEVNWSKLTKDEIDQ HHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCCEEEEECCCCCEEEEEHHHCCHHHHHH IWAEAKYYYEQGEELFLNPELEEAMRSIQSKHTEESPYTGIIDEYLNTPIPSNWDDLTIF HHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCHHH ERRRFYQGDVDMLPTGNVDYVERNKVCALEVFVECFGKDKGDSRGSMEIRKISNILRQLD HHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC NWSVYDGNKSGKIRFGKDYGVQIAYVRDESLEDLI CCEEECCCCCCCEEECCCCCEEEEEECCCCHHHCC >Mature Secondary Structure MLDKVTQIETIKYDRDVSYSYAASRLSTYWTNHNMAWSDFMQKLAQTVRTKEDLTEYNKM CCCCCCHHHEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SKSEQADIKDVGGFVGGYLKEGKRRAGQVMNRSMLTLDIDYAAQDMTDILSMFYDFAYCL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHH YSTHKHREISPRLRLVIPLKRNVNADEYEAIGRKVADIVGMDYFDDTTYQPHRLMYWPST HHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC SNDAEFFFTYEDLPLLDPDTILNEYVDWTDTLEWPTSSKEESKTKRLADKQGDPEEKPGI CCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCH VGAFCRAYTIEEAISTFIPDLYEKHSTNRYTYHEGSTAGGLVLYENNKFAYSHHNTDPVS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCEEEEECCCCCCCC GMLVNSFDLVRIHLYGAQDEDAKTDTPVNRLPSYKAMQQRAQNDEVVKKQLINDKMSDAM CEEECCEEEEEEEEECCCCCCCCCCCCHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH QDFDEIVNSDDAWSETLEITSKGTFKASIPNIEIILRNDPNLKGKIAFNEFTKQIECLGK HHHHHHHCCCCCHHHHHHCCCCCCEEEECCCEEEEEECCCCCCEEEEHHHHHHHHHHHHC VPWNTNFKTRQWQDGDDSSLRSYIEKIYDIHHSGKTKDAIISVAMQNAYHPVRDYLNKIS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCC WDGHKRLEKLFIKYLGVEDTEVNRTTTKKALTAGIARVMEPGCKFDYMLTLYGPQGVGKS CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHH ALLKKLGGAWFSDSLVSVTGKEAYEALQGVWLMEMAELAATRKAEVEAIKHFISKQVDRF HHHHHHCCCCCCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVAYGHYIEDFPRQCIFIGTTNKVDFLRDETGGRRFWPMTVNPERVEVNWSKLTKDEIDQ HHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCCEEEEECCCCCEEEEEHHHCCHHHHHH IWAEAKYYYEQGEELFLNPELEEAMRSIQSKHTEESPYTGIIDEYLNTPIPSNWDDLTIF HHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCHHH ERRRFYQGDVDMLPTGNVDYVERNKVCALEVFVECFGKDKGDSRGSMEIRKISNILRQLD HHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC NWSVYDGNKSGKIRFGKDYGVQIAYVRDESLEDLI CCEEECCCCCCCEEECCCCCEEEEEECCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA