| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is livG [H]
Identifier: 148261192
GI number: 148261192
Start: 2431800
End: 2432507
Strand: Reverse
Name: livG [H]
Synonym: Acry_2202
Alternate gene names: 148261192
Gene position: 2432507-2431800 (Counterclockwise)
Preceding gene: 148261193
Following gene: 148261191
Centisome position: 71.77
GC content: 67.94
Gene sequence:
>708_bases ATGTCCTCTGAACCGCTGCTCCGGCTGGACGGGGTGAGCAAGCGCTTCGGCGGGCTCACCGTGCTCGACCGGCAGAGTTT CTCGATATCCGAAGGCGAGATTCTCGGCCTGGTCGGCCCCAACGGTTCCGGCAAGACGACAACGATCAACGTCATCTCCG GGGTGCACCAGGCCGATGCCGGGCGCATCCTGTTCGAGGGGCGGGAAATCCAGCGCCTGCCGCTGTTCCGCATCGCCCGG CTCGGCATCAACCGCAGCTTCCAGGTGCCGAAATGCTTCCGCGCGATGCGGGTGCGCGAGAACATCGAGGTCGCCGCGAC CTTCGCCGGGCGCGGCACGGTGGATATCGACGAGATCCTCGCCGGTATCGGGCTCGCCGACCAGGCCGACGCGATCGCCG GGGCGCTGACCGTCAACCAGCAGAAGATGCTCGATCTCGGCCGCGCGCTGGCGACCAATCCGCGCCTGCTGCTGATCGAC GAGATCGGCGCGGGGCTCAATCCGGCGGAGCTCGGGGGCATCGCCGAACTGCTGAAATCGCTCGCCGCGCGGGGCATCGC GCTCATCGTCGTCGAGCATCTGCTCGATTTCCTCAACCGCATCACCGACCGGGTGATCGTGCTGGGCGCGGGGCGGATGC TGTTCGAGGGTTCGCTCAAGGCGGCGTCGCGGGACCCGGACGTGGTCGCCGCGTTCATCGGAGGCTGA
Upstream 100 bases:
>100_bases GCGCCGCAATATTTCGAACTGCTCTACGGGCTGCTGATCGTGCTGCTGGTGCTGTTCCTGCCCAACGGCCTGATGTCGCT GCTGATCCGGAGAAATGTCG
Downstream 100 bases:
>100_bases CGGCATGACCCTTCTCGCACTCAAGGGCGTCGAGTCCGGGTATGGCCCGATGCAGGTTCTCTGGGGCATCGACCTCGCGG TGAACGCGGGCGAGACGGTG
Product: ABC transporter-like protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MSSEPLLRLDGVSKRFGGLTVLDRQSFSISEGEILGLVGPNGSGKTTTINVISGVHQADAGRILFEGREIQRLPLFRIAR LGINRSFQVPKCFRAMRVRENIEVAATFAGRGTVDIDEILAGIGLADQADAIAGALTVNQQKMLDLGRALATNPRLLLID EIGAGLNPAELGGIAELLKSLAARGIALIVVEHLLDFLNRITDRVIVLGAGRMLFEGSLKAASRDPDVVAAFIGG
Sequences:
>Translated_235_residues MSSEPLLRLDGVSKRFGGLTVLDRQSFSISEGEILGLVGPNGSGKTTTINVISGVHQADAGRILFEGREIQRLPLFRIAR LGINRSFQVPKCFRAMRVRENIEVAATFAGRGTVDIDEILAGIGLADQADAIAGALTVNQQKMLDLGRALATNPRLLLID EIGAGLNPAELGGIAELLKSLAARGIALIVVEHLLDFLNRITDRVIVLGAGRMLFEGSLKAASRDPDVVAAFIGG >Mature_234_residues SSEPLLRLDGVSKRFGGLTVLDRQSFSISEGEILGLVGPNGSGKTTTINVISGVHQADAGRILFEGREIQRLPLFRIARL GINRSFQVPKCFRAMRVRENIEVAATFAGRGTVDIDEILAGIGLADQADAIAGALTVNQQKMLDLGRALATNPRLLLIDE IGAGLNPAELGGIAELLKSLAARGIALIVVEHLLDFLNRITDRVIVLGAGRMLFEGSLKAASRDPDVVAAFIGG
Specific function: Probable component of a branched-chain amino-acid transport system [H]
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI153792144, Length=220, Percent_Identity=28.1818181818182, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI27262624, Length=220, Percent_Identity=27.7272727272727, Blast_Score=81, Evalue=9e-16, Organism=Homo sapiens, GI27262626, Length=220, Percent_Identity=27.7272727272727, Blast_Score=81, Evalue=9e-16, Organism=Homo sapiens, GI27881501, Length=217, Percent_Identity=28.110599078341, Blast_Score=77, Evalue=9e-15, Organism=Homo sapiens, GI30795238, Length=217, Percent_Identity=28.110599078341, Blast_Score=77, Evalue=9e-15, Organism=Homo sapiens, GI150417984, Length=219, Percent_Identity=26.027397260274, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI27436953, Length=205, Percent_Identity=29.2682926829268, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI105990541, Length=205, Percent_Identity=24.390243902439, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI215820660, Length=205, Percent_Identity=26.8292682926829, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI20143975, Length=205, Percent_Identity=26.8292682926829, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI27477115, Length=222, Percent_Identity=25.6756756756757, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI45446740, Length=215, Percent_Identity=23.7209302325581, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI31657092, Length=219, Percent_Identity=27.3972602739726, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI47078218, Length=215, Percent_Identity=23.7209302325581, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI46592956, Length=211, Percent_Identity=27.9620853080569, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI46592964, Length=211, Percent_Identity=27.9620853080569, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI6005701, Length=205, Percent_Identity=27.3170731707317, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI46592898, Length=211, Percent_Identity=27.9620853080569, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI46592978, Length=211, Percent_Identity=27.9620853080569, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI46592915, Length=211, Percent_Identity=27.9620853080569, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI46592971, Length=211, Percent_Identity=27.9620853080569, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI116734710, Length=197, Percent_Identity=24.8730964467005, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI21536376, Length=230, Percent_Identity=25.2173913043478, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1789864, Length=252, Percent_Identity=32.9365079365079, Blast_Score=142, Evalue=1e-35, Organism=Escherichia coli, GI1787792, Length=228, Percent_Identity=31.140350877193, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1789991, Length=238, Percent_Identity=29.8319327731092, Blast_Score=108, Evalue=2e-25, Organism=Escherichia coli, GI87082268, Length=235, Percent_Identity=31.063829787234, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI48995001, Length=222, Percent_Identity=31.0810810810811, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1787370, Length=240, Percent_Identity=31.6666666666667, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1788225, Length=233, Percent_Identity=30.0429184549356, Blast_Score=100, Evalue=6e-23, Organism=Escherichia coli, GI1787029, Length=228, Percent_Identity=26.7543859649123, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI1788472, Length=240, Percent_Identity=26.25, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1789593, Length=229, Percent_Identity=27.0742358078603, Blast_Score=98, Evalue=4e-22, Organism=Escherichia coli, GI1790190, Length=230, Percent_Identity=26.0869565217391, Blast_Score=97, Evalue=8e-22, Organism=Escherichia coli, GI1786398, Length=232, Percent_Identity=28.0172413793103, Blast_Score=97, Evalue=9e-22, Organism=Escherichia coli, GI1790525, Length=241, Percent_Identity=26.1410788381743, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1789672, Length=221, Percent_Identity=27.1493212669683, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1788761, Length=235, Percent_Identity=29.3617021276596, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI87081709, Length=244, Percent_Identity=28.2786885245902, Blast_Score=88, Evalue=4e-19, Organism=Escherichia coli, GI1788897, Length=223, Percent_Identity=26.0089686098655, Blast_Score=88, Evalue=4e-19, Organism=Escherichia coli, GI1788450, Length=237, Percent_Identity=28.2700421940928, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI87081834, Length=233, Percent_Identity=30.0429184549356, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1786872, Length=229, Percent_Identity=27.5109170305677, Blast_Score=84, Evalue=5e-18, Organism=Escherichia coli, GI1789873, Length=215, Percent_Identity=28.3720930232558, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI87081791, Length=242, Percent_Identity=26.8595041322314, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI48994943, Length=244, Percent_Identity=27.8688524590164, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1788210, Length=220, Percent_Identity=24.5454545454545, Blast_Score=80, Evalue=9e-17, Organism=Escherichia coli, GI87081782, Length=242, Percent_Identity=26.0330578512397, Blast_Score=77, Evalue=7e-16, Organism=Escherichia coli, GI1787712, Length=236, Percent_Identity=29.2372881355932, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1790544, Length=235, Percent_Identity=25.531914893617, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1789032, Length=247, Percent_Identity=29.1497975708502, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1789586, Length=242, Percent_Identity=28.9256198347107, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI1787105, Length=200, Percent_Identity=27, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1787089, Length=221, Percent_Identity=23.9819004524887, Blast_Score=70, Evalue=8e-14, Organism=Escherichia coli, GI145693107, Length=246, Percent_Identity=28.0487804878049, Blast_Score=70, Evalue=9e-14, Organism=Escherichia coli, GI1787547, Length=241, Percent_Identity=27.8008298755187, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786345, Length=227, Percent_Identity=25.9911894273128, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1788644, Length=234, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1790467, Length=236, Percent_Identity=26.6949152542373, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI48994997, Length=237, Percent_Identity=26.5822784810127, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1789963, Length=253, Percent_Identity=26.8774703557312, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786253, Length=221, Percent_Identity=24.8868778280543, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786319, Length=223, Percent_Identity=25.5605381165919, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789891, Length=231, Percent_Identity=26.4069264069264, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1786703, Length=228, Percent_Identity=26.3157894736842, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1786563, Length=228, Percent_Identity=27.1929824561404, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1788165, Length=233, Percent_Identity=27.8969957081545, Blast_Score=61, Evalue=5e-11, Organism=Caenorhabditis elegans, GI71983523, Length=222, Percent_Identity=27.027027027027, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71983516, Length=222, Percent_Identity=27.027027027027, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71983510, Length=222, Percent_Identity=27.027027027027, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI115533608, Length=217, Percent_Identity=29.4930875576037, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17510237, Length=219, Percent_Identity=22.3744292237443, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI212646699, Length=214, Percent_Identity=28.5046728971963, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71996809, Length=212, Percent_Identity=26.8867924528302, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI193211015, Length=212, Percent_Identity=26.8867924528302, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI193211017, Length=212, Percent_Identity=26.8867924528302, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17569143, Length=207, Percent_Identity=29.951690821256, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17569145, Length=207, Percent_Identity=27.536231884058, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI25146777, Length=213, Percent_Identity=26.2910798122066, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17558664, Length=214, Percent_Identity=27.5700934579439, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71988343, Length=216, Percent_Identity=26.3888888888889, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17565586, Length=191, Percent_Identity=28.7958115183246, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71984940, Length=206, Percent_Identity=28.6407766990291, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322177, Length=185, Percent_Identity=28.1081081081081, Blast_Score=67, Evalue=4e-12, Organism=Drosophila melanogaster, GI221512771, Length=217, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI161076682, Length=218, Percent_Identity=29.3577981651376, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI161076684, Length=218, Percent_Identity=29.3577981651376, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24581617, Length=218, Percent_Identity=29.3577981651376, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24581615, Length=218, Percent_Identity=29.3577981651376, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI28574533, Length=198, Percent_Identity=29.7979797979798, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24648314, Length=219, Percent_Identity=28.310502283105, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI24643674, Length=216, Percent_Identity=26.8518518518519, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI24666092, Length=225, Percent_Identity=27.1111111111111, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI85724864, Length=212, Percent_Identity=28.3018867924528, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24580555, Length=212, Percent_Identity=28.3018867924528, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI85816269, Length=212, Percent_Identity=28.3018867924528, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24580553, Length=212, Percent_Identity=28.3018867924528, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI85726357, Length=210, Percent_Identity=27.6190476190476, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI28574150, Length=203, Percent_Identity=26.6009852216749, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI116007328, Length=203, Percent_Identity=26.6009852216749, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 24933; Mature: 24802
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: PS50893 ABC_TRANSPORTER_2 ; PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEPLLRLDGVSKRFGGLTVLDRQSFSISEGEILGLVGPNGSGKTTTINVISGVHQADA CCCCCCEEECCCCHHHCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCC GRILFEGREIQRLPLFRIARLGINRSFQVPKCFRAMRVRENIEVAATFAGRGTVDIDEIL CEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHH AGIGLADQADAIAGALTVNQQKMLDLGRALATNPRLLLIDEIGAGLNPAELGGIAELLKS HHCCCCCCHHHHHHHEEECHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHH LAARGIALIVVEHLLDFLNRITDRVIVLGAGRMLFEGSLKAASRDPDVVAAFIGG HHHCCHHHHHHHHHHHHHHHHHHEEEEEECCCEEEECCCCCCCCCCCEEEEEECC >Mature Secondary Structure SSEPLLRLDGVSKRFGGLTVLDRQSFSISEGEILGLVGPNGSGKTTTINVISGVHQADA CCCCCEEECCCCHHHCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCC GRILFEGREIQRLPLFRIARLGINRSFQVPKCFRAMRVRENIEVAATFAGRGTVDIDEIL CEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHH AGIGLADQADAIAGALTVNQQKMLDLGRALATNPRLLLIDEIGAGLNPAELGGIAELLKS HHCCCCCCHHHHHHHEEECHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHH LAARGIALIVVEHLLDFLNRITDRVIVLGAGRMLFEGSLKAASRDPDVVAAFIGG HHHCCHHHHHHHHHHHHHHHHHHEEEEEECCCEEEECCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]