| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148261081
Identifier: 148261081
GI number: 148261081
Start: 2303015
End: 2304346
Strand: Reverse
Name: 148261081
Synonym: Acry_2090
Alternate gene names: NA
Gene position: 2304346-2303015 (Counterclockwise)
Preceding gene: 148261082
Following gene: 148261080
Centisome position: 67.99
GC content: 69.67
Gene sequence:
>1332_bases ATGAGCTGGACCAACAGGGTCGTCTGGCAGGAAGGCATGTTCCTGCGCTCGCAGCATTTCCAGCAACAGGACCGTTGGCT CGAAGCCCAGGTGCGCGGCCGGGTGGCGGCGCTGCGGCCCTATCCGTGGGGAATCTCCCGTCTCGCGGTCAACCGGGAAC TGCTCGGCACCGGCCGTTTCGCCCTGGCCGAGGCTGAAGGCGTGTTCGAGGACGGAACCTGCTTCTCCCTGCCGGGCGAG GCCGATCATCCGCCGCCGTTCGAGGTGCCCGAGAACACGCGCAACATGCTGCTTCACCTCGCGCTGCCGGTGCGCCAGCC CGGCGCCGCCGAGATCGCCGCGGAAGACGGCAGCACCGAGGGACGCTACGGCGCCGCCCGCTTCGAGGCCTACGACACGC ATTCCGCCTCGCCCGAGCCGGCGGAGCTGCTGATCGCCCGGCTGCGCCTGCGCTATCTCCTCGACAGCGAGGACCGCGCC GGCTTCCTCTGCCTGCCGGTCGCGCGGATCGTCGAGGTTTCGGCCGACCGGCGCGTGACGCTGGATGACCGCTGGATCCC GCCGGCGCTGGTCTGTCACGCGGCGCCGCCGCTCGCCGGGCTGATCGCCGAATTCTCCGGCATGATCCACCAGCGTGGCG AGGCGCTCGCCGCCCGGCTCAATGCGCCGGGCACGCGCGGCGTCGCCGAGGTGCAGGATTTCATGCTGCTCCAGGCGATC AACCGCTGGCAGGCGATGCTCCAGCACTGGGCCGACGCCGCCGTGATCCATCCGGAGACCCTCTATTCCGCCTTCGTCTC GATGGCCGGCGAGTTTGCCACCTTCATCGAGGGCAGCCGCCGGCCCACCGCCTATCCCGGTTACCGGCACGACGATCTGC AACGCAGCTTCGCGCCGGTCGTCGCCGATCTGCGGCGGGCGCTCTCGGCGGTCATCGAACAGAACGCCGTGCCGATCCCG CTGCAGGAGCGGCGCCACGGCGTTCATGTCGGCCCGATCGTCGACCGCAGCATCCTGCGCGCCGCGAATTTCGTCCTGAC CGTGCAGGCCGACGTGCCGGCCGAGACCCTGCGCCGGCTGTTCCCCGCGCAGGTGAAGATCGGCGCCGTCGAGCATATCC GCGAACTGGTCAACGTCGCGTTGCCCGGCATCTCGGTGCGGCCGCTCCCGGTGGCGCCCCGGCAGATCCCTTTCTATGCC GGCGCCACCTATTTCGAGCTCGATCGCGGCAGTCCGCACTGGCAGCAGATGCAGAATTCAGGCGCGTTCGCACTGCACGT ATCGGGCGAATTTCCGGGGCTGAAACTCGAACTCTGGGCGATCCGCGGCTGA
Upstream 100 bases:
>100_bases CGTCGCGCCGGTGAAGGCGCATGAAACGAACGCGCTGACCTTGCGGATCGACGGATTGGACGCCAAGCTCGTCCCAACCA AACCGAAGGGCTGAACGTCG
Downstream 100 bases:
>100_bases AGAGGGTGGCATGAGCGACAATCCGTTTGCCGAACCAGACGATTCCGACCGCACGATCATCAGGCCGGCGCCGGGCGGCC GGCGTCCCCCGCCCGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Protein ImpJ; Type VI Secretion System Protein ImpJ; Type VI Secretion; Type VI Secretion System Core Protein; T6ss M; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MSWTNRVVWQEGMFLRSQHFQQQDRWLEAQVRGRVAALRPYPWGISRLAVNRELLGTGRFALAEAEGVFEDGTCFSLPGE ADHPPPFEVPENTRNMLLHLALPVRQPGAAEIAAEDGSTEGRYGAARFEAYDTHSASPEPAELLIARLRLRYLLDSEDRA GFLCLPVARIVEVSADRRVTLDDRWIPPALVCHAAPPLAGLIAEFSGMIHQRGEALAARLNAPGTRGVAEVQDFMLLQAI NRWQAMLQHWADAAVIHPETLYSAFVSMAGEFATFIEGSRRPTAYPGYRHDDLQRSFAPVVADLRRALSAVIEQNAVPIP LQERRHGVHVGPIVDRSILRAANFVLTVQADVPAETLRRLFPAQVKIGAVEHIRELVNVALPGISVRPLPVAPRQIPFYA GATYFELDRGSPHWQQMQNSGAFALHVSGEFPGLKLELWAIRG
Sequences:
>Translated_443_residues MSWTNRVVWQEGMFLRSQHFQQQDRWLEAQVRGRVAALRPYPWGISRLAVNRELLGTGRFALAEAEGVFEDGTCFSLPGE ADHPPPFEVPENTRNMLLHLALPVRQPGAAEIAAEDGSTEGRYGAARFEAYDTHSASPEPAELLIARLRLRYLLDSEDRA GFLCLPVARIVEVSADRRVTLDDRWIPPALVCHAAPPLAGLIAEFSGMIHQRGEALAARLNAPGTRGVAEVQDFMLLQAI NRWQAMLQHWADAAVIHPETLYSAFVSMAGEFATFIEGSRRPTAYPGYRHDDLQRSFAPVVADLRRALSAVIEQNAVPIP LQERRHGVHVGPIVDRSILRAANFVLTVQADVPAETLRRLFPAQVKIGAVEHIRELVNVALPGISVRPLPVAPRQIPFYA GATYFELDRGSPHWQQMQNSGAFALHVSGEFPGLKLELWAIRG >Mature_442_residues SWTNRVVWQEGMFLRSQHFQQQDRWLEAQVRGRVAALRPYPWGISRLAVNRELLGTGRFALAEAEGVFEDGTCFSLPGEA DHPPPFEVPENTRNMLLHLALPVRQPGAAEIAAEDGSTEGRYGAARFEAYDTHSASPEPAELLIARLRLRYLLDSEDRAG FLCLPVARIVEVSADRRVTLDDRWIPPALVCHAAPPLAGLIAEFSGMIHQRGEALAARLNAPGTRGVAEVQDFMLLQAIN RWQAMLQHWADAAVIHPETLYSAFVSMAGEFATFIEGSRRPTAYPGYRHDDLQRSFAPVVADLRRALSAVIEQNAVPIPL QERRHGVHVGPIVDRSILRAANFVLTVQADVPAETLRRLFPAQVKIGAVEHIRELVNVALPGISVRPLPVAPRQIPFYAG ATYFELDRGSPHWQQMQNSGAFALHVSGEFPGLKLELWAIRG
Specific function: Unknown
COG id: COG3522
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49158; Mature: 49027
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWTNRVVWQEGMFLRSQHFQQQDRWLEAQVRGRVAALRPYPWGISRLAVNRELLGTGRF CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCE ALAEAEGVFEDGTCFSLPGEADHPPPFEVPENTRNMLLHLALPVRQPGAAEIAAEDGSTE EEECCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCEEEECCCCCC GRYGAARFEAYDTHSASPEPAELLIARLRLRYLLDSEDRAGFLCLPVARIVEVSADRRVT CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHCCCCEEE LDDRWIPPALVCHAAPPLAGLIAEFSGMIHQRGEALAARLNAPGTRGVAEVQDFMLLQAI CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH NRWQAMLQHWADAAVIHPETLYSAFVSMAGEFATFIEGSRRPTAYPGYRHDDLQRSFAPV HHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH VADLRRALSAVIEQNAVPIPLQERRHGVHVGPIVDRSILRAANFVLTVQADVPAETLRRL HHHHHHHHHHHHHCCCCCCCHHHHCCCCEECCHHHHHHHHHCCEEEEEECCCCHHHHHHH FPAQVKIGAVEHIRELVNVALPGISVRPLPVAPRQIPFYAGATYFELDRGSPHWQQMQNS CCHHEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCEEEEECCCCHHHHHHHCC GAFALHVSGEFPGLKLELWAIRG CCEEEEECCCCCCEEEEEEEECC >Mature Secondary Structure SWTNRVVWQEGMFLRSQHFQQQDRWLEAQVRGRVAALRPYPWGISRLAVNRELLGTGRF CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCE ALAEAEGVFEDGTCFSLPGEADHPPPFEVPENTRNMLLHLALPVRQPGAAEIAAEDGSTE EEECCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCEEEECCCCCC GRYGAARFEAYDTHSASPEPAELLIARLRLRYLLDSEDRAGFLCLPVARIVEVSADRRVT CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHCCCCEEE LDDRWIPPALVCHAAPPLAGLIAEFSGMIHQRGEALAARLNAPGTRGVAEVQDFMLLQAI CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH NRWQAMLQHWADAAVIHPETLYSAFVSMAGEFATFIEGSRRPTAYPGYRHDDLQRSFAPV HHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH VADLRRALSAVIEQNAVPIPLQERRHGVHVGPIVDRSILRAANFVLTVQADVPAETLRRL HHHHHHHHHHHHHCCCCCCCHHHHCCCCEECCHHHHHHHHHCCEEEEEECCCCHHHHHHH FPAQVKIGAVEHIRELVNVALPGISVRPLPVAPRQIPFYAGATYFELDRGSPHWQQMQNS CCHHEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCEEEEECCCCHHHHHHHCC GAFALHVSGEFPGLKLELWAIRG CCEEEEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA