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The map label for this gene is yiaD [H]

Identifier: 148261080

GI number: 148261080

Start: 2301634

End: 2303004

Strand: Reverse

Name: yiaD [H]

Synonym: Acry_2089

Alternate gene names: 148261080

Gene position: 2303004-2301634 (Counterclockwise)

Preceding gene: 148261081

Following gene: 148261079

Centisome position: 67.95

GC content: 72.87

Gene sequence:

>1371_bases
ATGAGCGACAATCCGTTTGCCGAACCAGACGATTCCGACCGCACGATCATCAGGCCGGCGCCGGGCGGCCGGCGTCCCCC
GCCCGCGCCGCCGCCGCCGCCGCCAACCGGCGGTGGCGACCCTTGGAGCGAGCCGCCGCGGCCGGCATCCCCGCCGCCCG
CGGGCGGCGCGGAGACGCTGAATATCGGCTCGACGCCGCTGATGGCGGCCGCGGCCCCCCTGCTGCAGTTGCTCGCTCGC
TTGCGCAACACCCTGGCCCAGCCCGATTCGGGCGATCTGCGCGAACGCACCGCCCGCGCGTTGCGCGACTTCGAGCAGGC
GGGCCGCAATGCGGGCATTCCGAACGACCAGCTGCGCCCCGCGCATTACGCCCTGTGCGCCAGCCTCGATGACGTGGTGC
TCGCCACCCCCTGGGGCAGCAGCGGCGCCTGGGCCGCGCGCTCGATGGTGTCCACCTTCCATCAGGAGGTCCGCTCCGGC
GAGCGCTTCTTCGACATCCTCAAGCAGATCATGCAGAACCCGGGCCGGTTCCTGCCGGTTCTCGAGCTGATGTATATCTG
CCTCTCGCTCGGCTACATGGGGCGCTACCGGCTCAGTCCGCGCGGCCCCGCCGAGATCGACCGGCTGCGCGAGGATGTCT
ATGCCGTCCTCCGCCGCGCCCGCCCGGCCGCCAGCCCCGAACTGGCGCCCCACTGGCAGGGCGTTGCGGCGCCCTACCGC
CCGCGCCGCCCGTCCCTGCCGGTCTGGGTCGCCGCGGTGGCGGCCGCCGGGGTGCTGGCCCTTGTCTACGCGGCCTTCGA
CTACGGGCTCGGCGGCCAGTCCGCCACGCTCTACGCGCAGTCGGTCGCCGCCCACCCGGCGCGGATGCCGAAGATCGTCC
GCGCCGCCGCCGTCGTGCCGCCGCCGCCGCCGGTCACCACCGGCCCGAACGTGCTCGACCGGCTGCGCGGCTTCCTGCAA
CCCGAAATCACCAAGGGCGAGGTCGCCGTGCTCGGCACCGTCAACGCGCCGGTCATCCGCATCAACAACACCGGCCTGTT
CGCCTCCGGCAGCGCGACGGTCGAGAGCACCGCGCTGCCGCTGATTTCCAAGATCGGCCAGGCGCTGGCGCGCGAGAAGG
GCAAGGTGCAGGTGATCGGCTATACCGACAGCCAGCCGATCCACACGCTGCGCTTCCCCAACAACCTGGTCCTCTCGGAG
GACCGCGCGAAGGCGGCGGCCGCCGTGCTCGACCGCGCGATCGGCGATCAGAGCCGCATCACCGCGGAGGGGCGCGGCGC
CGCCGACCCGATCGCGACCAACGCGACGCCGCAGGGGCGCGCCCTGAACCGGCGGATCGAAATCGTGCTGATCCGGAGTG
AAACCCAATGA

Upstream 100 bases:

>100_bases
CAGCAGATGCAGAATTCAGGCGCGTTCGCACTGCACGTATCGGGCGAATTTCCGGGGCTGAAACTCGAACTCTGGGCGAT
CCGCGGCTGAAGAGGGTGGC

Downstream 100 bases:

>100_bases
GCGCACGGCTGGTCCGCTGGCTGCTGAGCGGCGTCGGCGCCGCGATCATCGCGGCCCTGGTCTGGTTCTTCGGCCCCTTC
CTCGCCGTGCTCGCCGGCAT

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MSDNPFAEPDDSDRTIIRPAPGGRRPPPAPPPPPPTGGGDPWSEPPRPASPPPAGGAETLNIGSTPLMAAAAPLLQLLAR
LRNTLAQPDSGDLRERTARALRDFEQAGRNAGIPNDQLRPAHYALCASLDDVVLATPWGSSGAWAARSMVSTFHQEVRSG
ERFFDILKQIMQNPGRFLPVLELMYICLSLGYMGRYRLSPRGPAEIDRLREDVYAVLRRARPAASPELAPHWQGVAAPYR
PRRPSLPVWVAAVAAAGVLALVYAAFDYGLGGQSATLYAQSVAAHPARMPKIVRAAAVVPPPPPVTTGPNVLDRLRGFLQ
PEITKGEVAVLGTVNAPVIRINNTGLFASGSATVESTALPLISKIGQALAREKGKVQVIGYTDSQPIHTLRFPNNLVLSE
DRAKAAAAVLDRAIGDQSRITAEGRGAADPIATNATPQGRALNRRIEIVLIRSETQ

Sequences:

>Translated_456_residues
MSDNPFAEPDDSDRTIIRPAPGGRRPPPAPPPPPPTGGGDPWSEPPRPASPPPAGGAETLNIGSTPLMAAAAPLLQLLAR
LRNTLAQPDSGDLRERTARALRDFEQAGRNAGIPNDQLRPAHYALCASLDDVVLATPWGSSGAWAARSMVSTFHQEVRSG
ERFFDILKQIMQNPGRFLPVLELMYICLSLGYMGRYRLSPRGPAEIDRLREDVYAVLRRARPAASPELAPHWQGVAAPYR
PRRPSLPVWVAAVAAAGVLALVYAAFDYGLGGQSATLYAQSVAAHPARMPKIVRAAAVVPPPPPVTTGPNVLDRLRGFLQ
PEITKGEVAVLGTVNAPVIRINNTGLFASGSATVESTALPLISKIGQALAREKGKVQVIGYTDSQPIHTLRFPNNLVLSE
DRAKAAAAVLDRAIGDQSRITAEGRGAADPIATNATPQGRALNRRIEIVLIRSETQ
>Mature_455_residues
SDNPFAEPDDSDRTIIRPAPGGRRPPPAPPPPPPTGGGDPWSEPPRPASPPPAGGAETLNIGSTPLMAAAAPLLQLLARL
RNTLAQPDSGDLRERTARALRDFEQAGRNAGIPNDQLRPAHYALCASLDDVVLATPWGSSGAWAARSMVSTFHQEVRSGE
RFFDILKQIMQNPGRFLPVLELMYICLSLGYMGRYRLSPRGPAEIDRLREDVYAVLRRARPAASPELAPHWQGVAAPYRP
RRPSLPVWVAAVAAAGVLALVYAAFDYGLGGQSATLYAQSVAAHPARMPKIVRAAAVVPPPPPVTTGPNVLDRLRGFLQP
EITKGEVAVLGTVNAPVIRINNTGLFASGSATVESTALPLISKIGQALAREKGKVQVIGYTDSQPIHTLRFPNNLVLSED
RAKAAAAVLDRAIGDQSRITAEGRGAADPIATNATPQGRALNRRIEIVLIRSETQ

Specific function: Unknown

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential). Cell inner membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=139, Percent_Identity=37.410071942446, Blast_Score=69, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 48636; Mature: 48505

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNPFAEPDDSDRTIIRPAPGGRRPPPAPPPPPPTGGGDPWSEPPRPASPPPAGGAETL
CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
NIGSTPLMAAAAPLLQLLARLRNTLAQPDSGDLRERTARALRDFEQAGRNAGIPNDQLRP
ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
AHYALCASLDDVVLATPWGSSGAWAARSMVSTFHQEVRSGERFFDILKQIMQNPGRFLPV
HHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHH
LELMYICLSLGYMGRYRLSPRGPAEIDRLREDVYAVLRRARPAASPELAPHWQGVAAPYR
HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PRRPSLPVWVAAVAAAGVLALVYAAFDYGLGGQSATLYAQSVAAHPARMPKIVRAAAVVP
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCC
PPPPVTTGPNVLDRLRGFLQPEITKGEVAVLGTVNAPVIRINNTGLFASGSATVESTALP
CCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCEEECCCCCHHHHHHH
LISKIGQALAREKGKVQVIGYTDSQPIHTLRFPNNLVLSEDRAKAAAAVLDRAIGDQSRI
HHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCEEECCHHHHHHHHHHHHHHCCCHHE
TAEGRGAADPIATNATPQGRALNRRIEIVLIRSETQ
EECCCCCCCCCCCCCCCCCCHHCCEEEEEEEECCCC
>Mature Secondary Structure 
SDNPFAEPDDSDRTIIRPAPGGRRPPPAPPPPPPTGGGDPWSEPPRPASPPPAGGAETL
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
NIGSTPLMAAAAPLLQLLARLRNTLAQPDSGDLRERTARALRDFEQAGRNAGIPNDQLRP
ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
AHYALCASLDDVVLATPWGSSGAWAARSMVSTFHQEVRSGERFFDILKQIMQNPGRFLPV
HHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHH
LELMYICLSLGYMGRYRLSPRGPAEIDRLREDVYAVLRRARPAASPELAPHWQGVAAPYR
HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PRRPSLPVWVAAVAAAGVLALVYAAFDYGLGGQSATLYAQSVAAHPARMPKIVRAAAVVP
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCC
PPPPVTTGPNVLDRLRGFLQPEITKGEVAVLGTVNAPVIRINNTGLFASGSATVESTALP
CCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCEEECCCCCHHHHHHH
LISKIGQALAREKGKVQVIGYTDSQPIHTLRFPNNLVLSEDRAKAAAAVLDRAIGDQSRI
HHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCEEECCHHHHHHHHHHHHHHCCCHHE
TAEGRGAADPIATNATPQGRALNRRIEIVLIRSETQ
EECCCCCCCCCCCCCCCCCCHHCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2180922 [H]