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The map label for this gene is dppB [H]

Identifier: 148261069

GI number: 148261069

Start: 2286898

End: 2287863

Strand: Reverse

Name: dppB [H]

Synonym: Acry_2077

Alternate gene names: 148261069

Gene position: 2287863-2286898 (Counterclockwise)

Preceding gene: 148261070

Following gene: 148261068

Centisome position: 67.5

GC content: 69.77

Gene sequence:

>966_bases
ATGGCGCGGCGGCTGCTCGGCCTGCTCGCGGGGCGGCTGATGCTCGGCCTCGTGACGCTGCTGCTGCTGAGCATGGTCGT
CTTCGCCGGGGCGCAGCTGCTGCCCGGCAATGTCGGCCGGGCGATCCTCGGGCCGCTGGCGAGCCCCGTCGCGGTCGCCG
CCCTCGACCGCCAGCTCGGCACCAACCTGCCGGTGCCGGTGCAGTACTGGCACTGGATCAGCCGGTTCGCCACCGGGAAC
ATGGGCGAGTCCTACGCGTTCCGCCGGCCGGTGGCGAGCTTCGTGGTGCCGGCGCTGCTCAACTCGCTGAAGCTCGCGTC
CATCGCCTTCGTCATCGTCGTGCCGCTGTCGATCGGCGCCGGGGTGTATGCGGCGATCCACGCGCGCTCGCGGATCGACC
GGGCGATCAGCCTCACCGGCCTGTCGATGACGGTGATCCCGGAATTCGTCTCCTCGATCGTGCTGATCCTGATCCTCGGC
ATCTGGCTGCGGGCGCTGCCGGTGACCGCGACGGCGCCGCGCCATGCCGGGGCGCTGGGGCAGATCCATCACCTGATCCT
GCCGGCGCTGCCGCTGGTGTTCGTGCTGTTCGGCTACATCGCGCGGATGGCCAGGGCGGGGACGATCGAGGCGCTGGAAT
CCGATTACGCGCGCACGGCGACGCTGAAGGGCCTGCCAAGGCGGACCGTGATCGTGCGGCACGTGCTGCGCAACGCGCTG
CCGCCGACGATCACCGTGGTGGCCACCCAGGTCGGCTATCTCGTCGGCGGGCTGGTGATCGTGGAGACGCTGTTCCGCTA
CCAGGGCATCGGCAGCCTGATCCTGACCGCCGCGCGGAACAAGGATTTCCCGATGCTGGAGGCGGGGATTCTCGTCATCG
GCGCGGTGTATGTGCTGGTGACCGTCGCCGCCGACATGCTGCTGATCATGCTCAATCCGCGGCTGCATCGCGGGGCGGCG
AAATGA

Upstream 100 bases:

>100_bases
TTTCTACAACTACCTCGCGGCCACGAAAAAGACCGTCAGCGGGGTGGTGGTGACCGGGATGTCGCAGGTGTTCCTGCAGC
ACGCCACGGTGGCATAGGGC

Downstream 100 bases:

>100_bases
GCGGCGCCGGGGCGGCGATGCCGGAAGCGGCCGCCGGGCGGGCGCGGCTGATCCTCGGCTCGGGCAGCGCGCGGGCGGGC
ATCGGCATCGTGCTGTTCTG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MARRLLGLLAGRLMLGLVTLLLLSMVVFAGAQLLPGNVGRAILGPLASPVAVAALDRQLGTNLPVPVQYWHWISRFATGN
MGESYAFRRPVASFVVPALLNSLKLASIAFVIVVPLSIGAGVYAAIHARSRIDRAISLTGLSMTVIPEFVSSIVLILILG
IWLRALPVTATAPRHAGALGQIHHLILPALPLVFVLFGYIARMARAGTIEALESDYARTATLKGLPRRTVIVRHVLRNAL
PPTITVVATQVGYLVGGLVIVETLFRYQGIGSLILTAARNKDFPMLEAGILVIGAVYVLVTVAADMLLIMLNPRLHRGAA
K

Sequences:

>Translated_321_residues
MARRLLGLLAGRLMLGLVTLLLLSMVVFAGAQLLPGNVGRAILGPLASPVAVAALDRQLGTNLPVPVQYWHWISRFATGN
MGESYAFRRPVASFVVPALLNSLKLASIAFVIVVPLSIGAGVYAAIHARSRIDRAISLTGLSMTVIPEFVSSIVLILILG
IWLRALPVTATAPRHAGALGQIHHLILPALPLVFVLFGYIARMARAGTIEALESDYARTATLKGLPRRTVIVRHVLRNAL
PPTITVVATQVGYLVGGLVIVETLFRYQGIGSLILTAARNKDFPMLEAGILVIGAVYVLVTVAADMLLIMLNPRLHRGAA
K
>Mature_320_residues
ARRLLGLLAGRLMLGLVTLLLLSMVVFAGAQLLPGNVGRAILGPLASPVAVAALDRQLGTNLPVPVQYWHWISRFATGNM
GESYAFRRPVASFVVPALLNSLKLASIAFVIVVPLSIGAGVYAAIHARSRIDRAISLTGLSMTVIPEFVSSIVLILILGI
WLRALPVTATAPRHAGALGQIHHLILPALPLVFVLFGYIARMARAGTIEALESDYARTATLKGLPRRTVIVRHVLRNALP
PTITVVATQVGYLVGGLVIVETLFRYQGIGSLILTAARNKDFPMLEAGILVIGAVYVLVTVAADMLLIMLNPRLHRGAAK

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=314, Percent_Identity=32.484076433121, Blast_Score=168, Evalue=5e-43,
Organism=Escherichia coli, GI1789965, Length=338, Percent_Identity=31.0650887573964, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI1789888, Length=278, Percent_Identity=32.0143884892086, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1787497, Length=316, Percent_Identity=30.6962025316456, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1787761, Length=320, Percent_Identity=29.6875, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1787550, Length=272, Percent_Identity=28.3088235294118, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1788504, Length=279, Percent_Identity=21.8637992831541, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34269; Mature: 34138

Theoretical pI: Translated: 11.86; Mature: 11.86

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRLLGLLAGRLMLGLVTLLLLSMVVFAGAQLLPGNVGRAILGPLASPVAVAALDRQLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
TNLPVPVQYWHWISRFATGNMGESYAFRRPVASFVVPALLNSLKLASIAFVIVVPLSIGA
CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVYAAIHARSRIDRAISLTGLSMTVIPEFVSSIVLILILGIWLRALPVTATAPRHAGALG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
QIHHLILPALPLVFVLFGYIARMARAGTIEALESDYARTATLKGLPRRTVIVRHVLRNAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PPTITVVATQVGYLVGGLVIVETLFRYQGIGSLILTAARNKDFPMLEAGILVIGAVYVLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
TVAADMLLIMLNPRLHRGAAK
HHHHHHHHHHHCCHHHCCCCC
>Mature Secondary Structure 
ARRLLGLLAGRLMLGLVTLLLLSMVVFAGAQLLPGNVGRAILGPLASPVAVAALDRQLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
TNLPVPVQYWHWISRFATGNMGESYAFRRPVASFVVPALLNSLKLASIAFVIVVPLSIGA
CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVYAAIHARSRIDRAISLTGLSMTVIPEFVSSIVLILILGIWLRALPVTATAPRHAGALG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
QIHHLILPALPLVFVLFGYIARMARAGTIEALESDYARTATLKGLPRRTVIVRHVLRNAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PPTITVVATQVGYLVGGLVIVETLFRYQGIGSLILTAARNKDFPMLEAGILVIGAVYVLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
TVAADMLLIMLNPRLHRGAAK
HHHHHHHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]