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The map label for this gene is yciR [C]

Identifier: 148261059

GI number: 148261059

Start: 2272622

End: 2274739

Strand: Reverse

Name: yciR [C]

Synonym: Acry_2067

Alternate gene names: 148261059

Gene position: 2274739-2272622 (Counterclockwise)

Preceding gene: 148261066

Following gene: 148261057

Centisome position: 67.12

GC content: 68.74

Gene sequence:

>2118_bases
ATGCGTAAGCCCAAGCGATCAGAGCCTGACGAAACAGCCGATCCCGAACTGGAGGAGCTGATCGAGAGGGATCGTGCCGA
ACTGCTCTATTCGTTGGGCGGCGGCAGCGTGTTCGTCACGGTCGCGGTGTCGTTCCTGCTCATCATCCTCGTGCAGGCGC
CGGGCGAGTGGTCCGCCCTGCTGGCCTGGTTCGCCGCCATCGTCCTCGTTTCCGCGATCCGCTCCGTCGACATCATCATC
CTGTTTCCCCGGGTCAGCCGGAAGCCTTTCGACGGCCGGAAGATGATCCGCCGCTTCGGGCTCGGCACGTCGACCCTGGC
CCTGCTGCTCGGCAGTTTCCCGATCTTCTTCTTTCCGCATCTCGCCGTCGTCGAGCGGGCGTATGCGTTCATGGTGTGTT
TCGGCATGGCGGGGGGGAGCGTCACCGTCCTGAGCGCCAGCTTTCCGCTGATCGTGACCTATTGCACCGCCGTCCTGCTG
CCGGGGGTTGCGGAGACCCTGATCGCGTATCAGCCGGGCGGGCAGAAATTCGCGGTGATCGGCATCGTCGGCTACATCTC
GTCGTTCTTCTTCGCCCGGACCACGTCGCGGACGGTGCTGCGCGGCTTGCGCCTGATGCGCACGAACCAGGTGCTGACGC
TGCGCTCCGAGCAGGAGAGGGTTCATCTCGAAGCGATGAAGAGCGACCTCGCGGACGCCAACGAGAGCCTGGAGCGCCGG
GTGTGCGAGCGGACCGCCCAGCTCGCGCACGAGGTGGCCGAGCGCGAGCGCTACGCGGCGGCCCTGAGCCGGCTCGCCTC
GACCGATCCGCTGACCGGGCTCTACAACCGCCCGACCTTCACCGCCCGCCTCGCCGGGCGCGCGGAGGGTTCGGTGGGGG
CGCCCGGCCGGGTCGCGCTGCTGTTCATCGATCTCGACAGCTTCAAGCAGATCAACGACCTGCGCGGCCACGAGATGGGG
GACCAGGTTCTGCGGCAAACCGCCGAGCGCGTCGCCCGGGTGATCGGCGCGACGGGGGACGTCGCGCGGTGGGGCGGCGA
CGAGTTCCTCGTCGCCCTGCCGGACTGCGGCGGCGAGGAGGCGCTCCGCCATGCCGAGCGGCTGATCGAGGCGATCAAGA
CGCCGATCACGGTGGGCGCGGATGTCTGCCGGGTCGAGGCCTCGGTGGGGGTGGCGCTCTATCCCGACAATGGCGATACC
GCCGACAGCGTGATCCGCGCCGCCGATGTCGCGATGTATGCGGCGAAGCGCGAGGGCAAGAGCCGGGCCAAGCGCTTCGA
CCCGGTTCTCGCCGATGACATGGCGGATCGCTACGACCTCGAACAGGGCCTGCGGGACGCCATCAAGGGGGATCAGTTCC
GCCTGGTGTTCCAGCCGATCATCGACGCGCGGACGGGCGCCTGCACGGCGTTCGAGGCGCTGCTGCGCTGGAATCACCCG
GTGCGCGGCGCGGTCAGCCCGGCGACGTTCATCCCGGTCGCCGAGCAGAGCGGGCAGATCGAGCGGATCGGCCGCTGGGT
GCTGGAAGAGGCGTGCCGCGCGGCGACCGGCTGGCCGGACCCGTCGATCGCCGTCACCGTCAACATCTCGGTCTCGCATG
TGCTGGTCGGCAGCCTGCTCGATGACGTCGAGCACGCGCTGGCGGTTTCGGGTCTGCCGCCATCGCGCCTGAAGATCGAA
ATCACCGAGACGATGTTCCTGCACGACGCCGACCGGTCGGCGCCGCTGTTCGACAGGCTGCGGCAGATGGGCGTGGGAAT
CCTGCTCGACGATTTCGGCACCGGCTTCTCGTCGCTGTCCTTCCTCGGCAACCTGCCGATCGACGTGATCAAGATCGACC
AGTCCTTCGTGCGCGACGCCGGGCGCAACGGCTATGCGACGATCGAGGCGATCCTCTCGATCGCCCGCGCGCTCGGGCTG
CAGGTGACGGCCGAAGGCGTCGAGACGCCGGAACAGAACCGCAACCTGGTGGAGCGGGGCGTCGGCAGCGTTCAGGGGTA
TCTGTTCAGCCGTCCGATTCCCGCCGCGGACGTGACGGACTGGCTGCAGATGACGGGGCGGGTGCCCGATCGTCCGTTCG
ATCCGGCCGCCGCGCCCGCCCTGGCGGCGAGCGCCTGA

Upstream 100 bases:

>100_bases
TGCTTAAGGCGCGTGAGGGAGTGGCGGACGCCGCAAGGGGGTCCGCCGGTCCGCGAGTATGGCGCCGGATCGTCAAGCCG
ATCCCCTGTCGGGAATTCAC

Downstream 100 bases:

>100_bases
ACGCGGGCTGGCCGGTCACGCCGAGCGCGACACCCCGGCCTTGACCCGGCGCAGCGGGATCGAGCTCTCGATCGAGGCGA
CGCCGCGCACCCGCGTCAGT

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 705; Mature: 705

Protein sequence:

>705_residues
MRKPKRSEPDETADPELEELIERDRAELLYSLGGGSVFVTVAVSFLLIILVQAPGEWSALLAWFAAIVLVSAIRSVDIII
LFPRVSRKPFDGRKMIRRFGLGTSTLALLLGSFPIFFFPHLAVVERAYAFMVCFGMAGGSVTVLSASFPLIVTYCTAVLL
PGVAETLIAYQPGGQKFAVIGIVGYISSFFFARTTSRTVLRGLRLMRTNQVLTLRSEQERVHLEAMKSDLADANESLERR
VCERTAQLAHEVAERERYAAALSRLASTDPLTGLYNRPTFTARLAGRAEGSVGAPGRVALLFIDLDSFKQINDLRGHEMG
DQVLRQTAERVARVIGATGDVARWGGDEFLVALPDCGGEEALRHAERLIEAIKTPITVGADVCRVEASVGVALYPDNGDT
ADSVIRAADVAMYAAKREGKSRAKRFDPVLADDMADRYDLEQGLRDAIKGDQFRLVFQPIIDARTGACTAFEALLRWNHP
VRGAVSPATFIPVAEQSGQIERIGRWVLEEACRAATGWPDPSIAVTVNISVSHVLVGSLLDDVEHALAVSGLPPSRLKIE
ITETMFLHDADRSAPLFDRLRQMGVGILLDDFGTGFSSLSFLGNLPIDVIKIDQSFVRDAGRNGYATIEAILSIARALGL
QVTAEGVETPEQNRNLVERGVGSVQGYLFSRPIPAADVTDWLQMTGRVPDRPFDPAAAPALAASA

Sequences:

>Translated_705_residues
MRKPKRSEPDETADPELEELIERDRAELLYSLGGGSVFVTVAVSFLLIILVQAPGEWSALLAWFAAIVLVSAIRSVDIII
LFPRVSRKPFDGRKMIRRFGLGTSTLALLLGSFPIFFFPHLAVVERAYAFMVCFGMAGGSVTVLSASFPLIVTYCTAVLL
PGVAETLIAYQPGGQKFAVIGIVGYISSFFFARTTSRTVLRGLRLMRTNQVLTLRSEQERVHLEAMKSDLADANESLERR
VCERTAQLAHEVAERERYAAALSRLASTDPLTGLYNRPTFTARLAGRAEGSVGAPGRVALLFIDLDSFKQINDLRGHEMG
DQVLRQTAERVARVIGATGDVARWGGDEFLVALPDCGGEEALRHAERLIEAIKTPITVGADVCRVEASVGVALYPDNGDT
ADSVIRAADVAMYAAKREGKSRAKRFDPVLADDMADRYDLEQGLRDAIKGDQFRLVFQPIIDARTGACTAFEALLRWNHP
VRGAVSPATFIPVAEQSGQIERIGRWVLEEACRAATGWPDPSIAVTVNISVSHVLVGSLLDDVEHALAVSGLPPSRLKIE
ITETMFLHDADRSAPLFDRLRQMGVGILLDDFGTGFSSLSFLGNLPIDVIKIDQSFVRDAGRNGYATIEAILSIARALGL
QVTAEGVETPEQNRNLVERGVGSVQGYLFSRPIPAADVTDWLQMTGRVPDRPFDPAAAPALAASA
>Mature_705_residues
MRKPKRSEPDETADPELEELIERDRAELLYSLGGGSVFVTVAVSFLLIILVQAPGEWSALLAWFAAIVLVSAIRSVDIII
LFPRVSRKPFDGRKMIRRFGLGTSTLALLLGSFPIFFFPHLAVVERAYAFMVCFGMAGGSVTVLSASFPLIVTYCTAVLL
PGVAETLIAYQPGGQKFAVIGIVGYISSFFFARTTSRTVLRGLRLMRTNQVLTLRSEQERVHLEAMKSDLADANESLERR
VCERTAQLAHEVAERERYAAALSRLASTDPLTGLYNRPTFTARLAGRAEGSVGAPGRVALLFIDLDSFKQINDLRGHEMG
DQVLRQTAERVARVIGATGDVARWGGDEFLVALPDCGGEEALRHAERLIEAIKTPITVGADVCRVEASVGVALYPDNGDT
ADSVIRAADVAMYAAKREGKSRAKRFDPVLADDMADRYDLEQGLRDAIKGDQFRLVFQPIIDARTGACTAFEALLRWNHP
VRGAVSPATFIPVAEQSGQIERIGRWVLEEACRAATGWPDPSIAVTVNISVSHVLVGSLLDDVEHALAVSGLPPSRLKIE
ITETMFLHDADRSAPLFDRLRQMGVGILLDDFGTGFSSLSFLGNLPIDVIKIDQSFVRDAGRNGYATIEAILSIARALGL
QVTAEGVETPEQNRNLVERGVGSVQGYLFSRPIPAADVTDWLQMTGRVPDRPFDPAAAPALAASA

Specific function: Unknown

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI1787541, Length=437, Percent_Identity=34.5537757437071, Blast_Score=266, Evalue=4e-72,
Organism=Escherichia coli, GI87081921, Length=452, Percent_Identity=34.5132743362832, Blast_Score=247, Evalue=2e-66,
Organism=Escherichia coli, GI226510982, Length=415, Percent_Identity=29.6385542168675, Blast_Score=166, Evalue=4e-42,
Organism=Escherichia coli, GI1790496, Length=247, Percent_Identity=35.2226720647773, Blast_Score=159, Evalue=6e-40,
Organism=Escherichia coli, GI87081980, Length=260, Percent_Identity=35.7692307692308, Blast_Score=152, Evalue=7e-38,
Organism=Escherichia coli, GI1788502, Length=256, Percent_Identity=36.328125, Blast_Score=152, Evalue=7e-38,
Organism=Escherichia coli, GI1786507, Length=273, Percent_Identity=30.7692307692308, Blast_Score=140, Evalue=3e-34,
Organism=Escherichia coli, GI87081743, Length=244, Percent_Identity=36.0655737704918, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI87081845, Length=244, Percent_Identity=34.0163934426229, Blast_Score=135, Evalue=9e-33,
Organism=Escherichia coli, GI1788381, Length=436, Percent_Identity=28.8990825688073, Blast_Score=125, Evalue=1e-29,
Organism=Escherichia coli, GI1787055, Length=524, Percent_Identity=25.1908396946565, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI1788849, Length=441, Percent_Identity=25.1700680272109, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI145693134, Length=176, Percent_Identity=34.6590909090909, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI87081881, Length=180, Percent_Identity=35.5555555555556, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI87082096, Length=421, Percent_Identity=24.2280285035629, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1787262, Length=163, Percent_Identity=31.2883435582822, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1787802, Length=162, Percent_Identity=32.0987654320988, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1788956, Length=277, Percent_Identity=28.8808664259928, Blast_Score=83, Evalue=6e-17,
Organism=Escherichia coli, GI1786584, Length=178, Percent_Identity=29.2134831460674, Blast_Score=83, Evalue=7e-17,
Organism=Escherichia coli, GI87081977, Length=163, Percent_Identity=36.1963190184049, Blast_Score=81, Evalue=3e-16,
Organism=Escherichia coli, GI87081974, Length=167, Percent_Identity=31.7365269461078, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI87082007, Length=166, Percent_Identity=32.5301204819277, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787410, Length=229, Percent_Identity=27.0742358078603, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787816, Length=164, Percent_Identity=31.0975609756098, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789650, Length=533, Percent_Identity=23.4521575984991, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 76607; Mature: 76607

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKPKRSEPDETADPELEELIERDRAELLYSLGGGSVFVTVAVSFLLIILVQAPGEWSAL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
LAWFAAIVLVSAIRSVDIIILFPRVSRKPFDGRKMIRRFGLGTSTLALLLGSFPIFFFPH
HHHHHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHH
LAVVERAYAFMVCFGMAGGSVTVLSASFPLIVTYCTAVLLPGVAETLIAYQPGGQKFAVI
HHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHEECCCCCEEEEH
GIVGYISSFFFARTTSRTVLRGLRLMRTNQVLTLRSEQERVHLEAMKSDLADANESLERR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
VCERTAQLAHEVAERERYAAALSRLASTDPLTGLYNRPTFTARLAGRAEGSVGAPGRVAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEE
LFIDLDSFKQINDLRGHEMGDQVLRQTAERVARVIGATGDVARWGGDEFLVALPDCGGEE
EEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEECCCCCCHH
ALRHAERLIEAIKTPITVGADVCRVEASVGVALYPDNGDTADSVIRAADVAMYAAKREGK
HHHHHHHHHHHHHCCCCCCCHHHEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
SRAKRFDPVLADDMADRYDLEQGLRDAIKGDQFRLVFQPIIDARTGACTAFEALLRWNHP
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCCCHHHHHHHHHHCCCC
VRGAVSPATFIPVAEQSGQIERIGRWVLEEACRAATGWPDPSIAVTVNISVSHVLVGSLL
CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHHHHHH
DDVEHALAVSGLPPSRLKIEITETMFLHDADRSAPLFDRLRQMGVGILLDDFGTGFSSLS
HHHHHHHHHCCCCCCCEEEEEEHEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHH
FLGNLPIDVIKIDQSFVRDAGRNGYATIEAILSIARALGLQVTAEGVETPEQNRNLVERG
HHCCCCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHC
VGSVQGYLFSRPIPAADVTDWLQMTGRVPDRPFDPAAAPALAASA
CHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MRKPKRSEPDETADPELEELIERDRAELLYSLGGGSVFVTVAVSFLLIILVQAPGEWSAL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
LAWFAAIVLVSAIRSVDIIILFPRVSRKPFDGRKMIRRFGLGTSTLALLLGSFPIFFFPH
HHHHHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHH
LAVVERAYAFMVCFGMAGGSVTVLSASFPLIVTYCTAVLLPGVAETLIAYQPGGQKFAVI
HHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHEECCCCCEEEEH
GIVGYISSFFFARTTSRTVLRGLRLMRTNQVLTLRSEQERVHLEAMKSDLADANESLERR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
VCERTAQLAHEVAERERYAAALSRLASTDPLTGLYNRPTFTARLAGRAEGSVGAPGRVAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEE
LFIDLDSFKQINDLRGHEMGDQVLRQTAERVARVIGATGDVARWGGDEFLVALPDCGGEE
EEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEECCCCCCHH
ALRHAERLIEAIKTPITVGADVCRVEASVGVALYPDNGDTADSVIRAADVAMYAAKREGK
HHHHHHHHHHHHHCCCCCCCHHHEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
SRAKRFDPVLADDMADRYDLEQGLRDAIKGDQFRLVFQPIIDARTGACTAFEALLRWNHP
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCCCHHHHHHHHHHCCCC
VRGAVSPATFIPVAEQSGQIERIGRWVLEEACRAATGWPDPSIAVTVNISVSHVLVGSLL
CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHHHHHH
DDVEHALAVSGLPPSRLKIEITETMFLHDADRSAPLFDRLRQMGVGILLDDFGTGFSSLS
HHHHHHHHHCCCCCCCEEEEEEHEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHH
FLGNLPIDVIKIDQSFVRDAGRNGYATIEAILSIARALGLQVTAEGVETPEQNRNLVERG
HHCCCCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHC
VGSVQGYLFSRPIPAADVTDWLQMTGRVPDRPFDPAAAPALAASA
CHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]