| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is aceE [H]
Identifier: 148261057
GI number: 148261057
Start: 2269610
End: 2272015
Strand: Reverse
Name: aceE [H]
Synonym: Acry_2065
Alternate gene names: 148261057
Gene position: 2272015-2269610 (Counterclockwise)
Preceding gene: 148261059
Following gene: 148261056
Centisome position: 67.04
GC content: 71.7
Gene sequence:
>2406_bases ATGACGCCGCATCTGAAAACCGCCGAACAGCGCCTGCTCTGGCTGTCGCACTGGATGATCCACAACGCCAACCACCTCCG GCCGAAAGTGGACGGGATCAAGACCGGCGGGCATCAGGCCTCCTCCGCCTCGATGGTGGGCATCATGGCGGCGCTCTATT TCACCGCGCTGCGCCCGGAGGACCGCGTCGCGGTGAAGCCGCACGCCGCCCCGGTGTTTCACGCGATGCAATACCTGATG GGCAACACCACGCGCGAGCGGCTGGAGACTTTCCGCGGCTTCGGCGGCACCCAGAGCTATCCGAGCCGCACCAAGGACGA TGACGACGTGGATTTCTCCACCGGATCGGTGGGCCTCGGCGTCGCCATCACCTCCTTCGCCGCGCTGGTGCAGGACTATA TCGCGGCGAAGCAATGGGGGCGGGATGTGCGGCGCGGCCGCATGGTCGCGCTGATGGGCGATGCCGAGATCGACGAGGGC AACATCCACGAATGCCTCCAGGAAGGCTGGAAGAACGGGCTGCGCGATGTCTGGTGGGTGATCGACTACAACCGCCAGTC GCTCGACGGGGTGGCCCGCGAGGGGCTGTGGCAGCGCATCGAGAAGATCTTCGAGGCGTTCGGCTGGGATGTGGTGCGGA TCAAGTACGGCGCGTTGCAGCGCGCGGCCTTCGCCGAGCCGGGCGGGGAGGCGCTGCGAAACTGGATCGATTCCTGCCCC AACCAGCGCTACGCAGCACTCACCTTCCAGGGCGGCGCGGCCTGGCGCAAGCGCCTGCTCGACGAGCTGGGCGACCAGGG CGCGGTCTCGGCGCTGATCGCCCGGCGCAGCGATGCCGAGCTGGCCGCGCTGATGGAGAATCTCGGCGGCAACTGCGTGC AGACCATGGCCGACACCTTCGCCGCGATCGACCACGACCGCCCGACCTGCTTCCTCGCCTACACGATCAAGGGCTGGGGC ACGCCGATCGCCGGGCACAAGGACAATCACGGCGGGGTGATGACGGTCGAGCAGATGCAGGCCTGGCAGCGCCACATGGG CGTGGGGCAGGGCGAGGAGTGGGAGCGTTTCGCCGCGGTGGCGGACGTGGAGGGCTTCCGCGCCTGGCTCGACGCGGTGC CCTTCTTCGCCGCCGGCCGCCGCCGGCACGACGATGCGCATCTGCCGGTCCCCGCCCTCGCTTCACCCGGCGAGCGGGAG ATCTCCACCCAGGCCGCCTTCGGCCGCATCCTCGACGATCTCGCCCGCGGCGACAGCGCGCTCGCCGCGCGCATCCTCAC CACCTCGCCCGACGTCACCGGCACCACCTCGCTCGGCCCCTGGGTCAACCGCCGCCGCCTGTTCGCCCGCGAGGCGATGG CCGACCTCTTCCGCGCCGAGAAGATCCCCTCGACCGCGCGCTGGGATTTCGCGCCCGAGGGCCAGCATCTCGAACTCGGC ATCGCCGAGACCAACCTGATGCTGCTGCTCGCCGCCGCCGGCCTCGCCCGTTCGCTGTTCGGCCGCCGCCTCATCCCCAT CGGCACCGTCTACGATCCGTTCATCGCCCGCGGGCTCGATGCGCTGAACTACGCCTGTTACCAGGATGCCCGCTTCCTGC TGGTCGGCACGCCCTCGGGCGTCACCCTCGCGCCGGAGGGTGGGGCGCACCAGTCGATCGGCACGCCGGCGATCGGCATG ACCCAGCCCGGCCTCGCCGCCTTCGAGCCGGCCTTCGCCGACGAGCTGGCGGCGATCATGGAATGGGCGTTCGACCATCT CCAGCGCGACGCCGCCGATCCGTATACCGATCCGCGCACCGGCCTCGCCGATGCGGCGGGCGGCTCGGTCTATCTGCGCC TGTCGACCAACCCGGTCGAGCAGCCGGGCCGGCGCGGCACCGCCTGGCGGCAGGGGGCCACCGAGGGCGCCTACTGGCTG CGCGAGCCGGGGCCGAACGCCGAACTCGTCATCGCCTATCAGGGGGTGGTGGCGCCGGAGGCGATCCGCGCCGCCGGGGC GCTGGCGGAAAGCCGGCGCGATATCGGCGTGCTCGCCGTCACCTCGGCCGACCGGCTGCATGCCGGCTGGAGCGCGGCCC AGCGGGCGAGATGCCGGGGCGAGGCGGTGACCTCGCTGGCCGAGCGCCTGCTCGCCCCGCTCCCGCGCGACTGCCGCATC GTCACGGTGATCGACGGCCATCCCGCCACCCTGTCCTGGCTCGGCGGCGTCGCCGGCCATGCGGTGCTGCCGCTCGGCGT CGAGCGCTTCGGCCAGACCGGCACCATCGCCGATCTCTACCGCGCCAACGGCATCGACGCCGCCGCGATCATCGAGCGCG TCGGCACCTTCACCAGCGGCCGGCCGGTGCTGGCCTTTCCGGCCCGTCCGCGCGCCCGGTCCGGGGCGGCCGCGCTGGCG GGGTGA
Upstream 100 bases:
>100_bases ACTATCGCCACGATATTGCCCTGGGCCGCGCGAATCGCAAGGATTCGCTCCGCCCGCCCGCCTAGACTCGGCGCACCGCC CTCACGCCGGGAGACCGCGA
Downstream 100 bases:
>100_bases TGCCGGCGGGCTTGGCATCGGCCCGCATATCGTCCTACCTGCGGATCAGGAGGAGCGGCGATGACGGACTGGGACTGGCG GCGCCCGCAAGGGCGGCATG
Product: transketolase, central region
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 801; Mature: 800
Protein sequence:
>801_residues MTPHLKTAEQRLLWLSHWMIHNANHLRPKVDGIKTGGHQASSASMVGIMAALYFTALRPEDRVAVKPHAAPVFHAMQYLM GNTTRERLETFRGFGGTQSYPSRTKDDDDVDFSTGSVGLGVAITSFAALVQDYIAAKQWGRDVRRGRMVALMGDAEIDEG NIHECLQEGWKNGLRDVWWVIDYNRQSLDGVAREGLWQRIEKIFEAFGWDVVRIKYGALQRAAFAEPGGEALRNWIDSCP NQRYAALTFQGGAAWRKRLLDELGDQGAVSALIARRSDAELAALMENLGGNCVQTMADTFAAIDHDRPTCFLAYTIKGWG TPIAGHKDNHGGVMTVEQMQAWQRHMGVGQGEEWERFAAVADVEGFRAWLDAVPFFAAGRRRHDDAHLPVPALASPGERE ISTQAAFGRILDDLARGDSALAARILTTSPDVTGTTSLGPWVNRRRLFAREAMADLFRAEKIPSTARWDFAPEGQHLELG IAETNLMLLLAAAGLARSLFGRRLIPIGTVYDPFIARGLDALNYACYQDARFLLVGTPSGVTLAPEGGAHQSIGTPAIGM TQPGLAAFEPAFADELAAIMEWAFDHLQRDAADPYTDPRTGLADAAGGSVYLRLSTNPVEQPGRRGTAWRQGATEGAYWL REPGPNAELVIAYQGVVAPEAIRAAGALAESRRDIGVLAVTSADRLHAGWSAAQRARCRGEAVTSLAERLLAPLPRDCRI VTVIDGHPATLSWLGGVAGHAVLPLGVERFGQTGTIADLYRANGIDAAAIIERVGTFTSGRPVLAFPARPRARSGAAALA G
Sequences:
>Translated_801_residues MTPHLKTAEQRLLWLSHWMIHNANHLRPKVDGIKTGGHQASSASMVGIMAALYFTALRPEDRVAVKPHAAPVFHAMQYLM GNTTRERLETFRGFGGTQSYPSRTKDDDDVDFSTGSVGLGVAITSFAALVQDYIAAKQWGRDVRRGRMVALMGDAEIDEG NIHECLQEGWKNGLRDVWWVIDYNRQSLDGVAREGLWQRIEKIFEAFGWDVVRIKYGALQRAAFAEPGGEALRNWIDSCP NQRYAALTFQGGAAWRKRLLDELGDQGAVSALIARRSDAELAALMENLGGNCVQTMADTFAAIDHDRPTCFLAYTIKGWG TPIAGHKDNHGGVMTVEQMQAWQRHMGVGQGEEWERFAAVADVEGFRAWLDAVPFFAAGRRRHDDAHLPVPALASPGERE ISTQAAFGRILDDLARGDSALAARILTTSPDVTGTTSLGPWVNRRRLFAREAMADLFRAEKIPSTARWDFAPEGQHLELG IAETNLMLLLAAAGLARSLFGRRLIPIGTVYDPFIARGLDALNYACYQDARFLLVGTPSGVTLAPEGGAHQSIGTPAIGM TQPGLAAFEPAFADELAAIMEWAFDHLQRDAADPYTDPRTGLADAAGGSVYLRLSTNPVEQPGRRGTAWRQGATEGAYWL REPGPNAELVIAYQGVVAPEAIRAAGALAESRRDIGVLAVTSADRLHAGWSAAQRARCRGEAVTSLAERLLAPLPRDCRI VTVIDGHPATLSWLGGVAGHAVLPLGVERFGQTGTIADLYRANGIDAAAIIERVGTFTSGRPVLAFPARPRARSGAAALA G >Mature_800_residues TPHLKTAEQRLLWLSHWMIHNANHLRPKVDGIKTGGHQASSASMVGIMAALYFTALRPEDRVAVKPHAAPVFHAMQYLMG NTTRERLETFRGFGGTQSYPSRTKDDDDVDFSTGSVGLGVAITSFAALVQDYIAAKQWGRDVRRGRMVALMGDAEIDEGN IHECLQEGWKNGLRDVWWVIDYNRQSLDGVAREGLWQRIEKIFEAFGWDVVRIKYGALQRAAFAEPGGEALRNWIDSCPN QRYAALTFQGGAAWRKRLLDELGDQGAVSALIARRSDAELAALMENLGGNCVQTMADTFAAIDHDRPTCFLAYTIKGWGT PIAGHKDNHGGVMTVEQMQAWQRHMGVGQGEEWERFAAVADVEGFRAWLDAVPFFAAGRRRHDDAHLPVPALASPGEREI STQAAFGRILDDLARGDSALAARILTTSPDVTGTTSLGPWVNRRRLFAREAMADLFRAEKIPSTARWDFAPEGQHLELGI AETNLMLLLAAAGLARSLFGRRLIPIGTVYDPFIARGLDALNYACYQDARFLLVGTPSGVTLAPEGGAHQSIGTPAIGMT QPGLAAFEPAFADELAAIMEWAFDHLQRDAADPYTDPRTGLADAAGGSVYLRLSTNPVEQPGRRGTAWRQGATEGAYWLR EPGPNAELVIAYQGVVAPEAIRAAGALAESRRDIGVLAVTSADRLHAGWSAAQRARCRGEAVTSLAERLLAPLPRDCRIV TVIDGHPATLSWLGGVAGHAVLPLGVERFGQTGTIADLYRANGIDAAAIIERVGTFTSGRPVLAFPARPRARSGAAALAG
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=611, Percent_Identity=25.3682487725041, Blast_Score=119, Evalue=6e-28,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 [H]
Pfam domain/function: PF00456 Transketolase_N [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 86786; Mature: 86655
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPHLKTAEQRLLWLSHWMIHNANHLRPKVDGIKTGGHQASSASMVGIMAALYFTALRPE CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC DRVAVKPHAAPVFHAMQYLMGNTTRERLETFRGFGGTQSYPSRTKDDDDVDFSTGSVGLG CCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH VAITSFAALVQDYIAAKQWGRDVRRGRMVALMGDAEIDEGNIHECLQEGWKNGLRDVWWV HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEE IDYNRQSLDGVAREGLWQRIEKIFEAFGWDVVRIKYGALQRAAFAEPGGEALRNWIDSCP EECCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHCC NQRYAALTFQGGAAWRKRLLDELGDQGAVSALIARRSDAELAALMENLGGNCVQTMADTF CCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH AAIDHDRPTCFLAYTIKGWGTPIAGHKDNHGGVMTVEQMQAWQRHMGVGQGEEWERFAAV HHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHH ADVEGFRAWLDAVPFFAAGRRRHDDAHLPVPALASPGEREISTQAAFGRILDDLARGDSA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHH LAARILTTSPDVTGTTSLGPWVNRRRLFAREAMADLFRAEKIPSTARWDFAPEGQHLELG HHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE IAETNLMLLLAAAGLARSLFGRRLIPIGTVYDPFIARGLDALNYACYQDARFLLVGTPSG ECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC VTLAPEGGAHQSIGTPAIGMTQPGLAAFEPAFADELAAIMEWAFDHLQRDAADPYTDPRT CEECCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GLADAAGGSVYLRLSTNPVEQPGRRGTAWRQGATEGAYWLREPGPNAELVIAYQGVVAPE CCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCEEECCCCCCCEEEEEECCCCCHH AIRAAGALAESRRDIGVLAVTSADRLHAGWSAAQRARCRGEAVTSLAERLLAPLPRDCRI HHHHHHHHHHHCCCCEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE VTVIDGHPATLSWLGGVAGHAVLPLGVERFGQTGTIADLYRANGIDAAAIIERVGTFTSG EEEECCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCC RPVLAFPARPRARSGAAALAG CCEEEECCCCCCCCCCCCCCC >Mature Secondary Structure TPHLKTAEQRLLWLSHWMIHNANHLRPKVDGIKTGGHQASSASMVGIMAALYFTALRPE CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC DRVAVKPHAAPVFHAMQYLMGNTTRERLETFRGFGGTQSYPSRTKDDDDVDFSTGSVGLG CCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH VAITSFAALVQDYIAAKQWGRDVRRGRMVALMGDAEIDEGNIHECLQEGWKNGLRDVWWV HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEE IDYNRQSLDGVAREGLWQRIEKIFEAFGWDVVRIKYGALQRAAFAEPGGEALRNWIDSCP EECCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHCC NQRYAALTFQGGAAWRKRLLDELGDQGAVSALIARRSDAELAALMENLGGNCVQTMADTF CCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH AAIDHDRPTCFLAYTIKGWGTPIAGHKDNHGGVMTVEQMQAWQRHMGVGQGEEWERFAAV HHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHH ADVEGFRAWLDAVPFFAAGRRRHDDAHLPVPALASPGEREISTQAAFGRILDDLARGDSA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHH LAARILTTSPDVTGTTSLGPWVNRRRLFAREAMADLFRAEKIPSTARWDFAPEGQHLELG HHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE IAETNLMLLLAAAGLARSLFGRRLIPIGTVYDPFIARGLDALNYACYQDARFLLVGTPSG ECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC VTLAPEGGAHQSIGTPAIGMTQPGLAAFEPAFADELAAIMEWAFDHLQRDAADPYTDPRT CEECCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GLADAAGGSVYLRLSTNPVEQPGRRGTAWRQGATEGAYWLREPGPNAELVIAYQGVVAPE CCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCEEECCCCCCCEEEEEECCCCCHH AIRAAGALAESRRDIGVLAVTSADRLHAGWSAAQRARCRGEAVTSLAERLLAPLPRDCRI HHHHHHHHHHHCCCCEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE VTVIDGHPATLSWLGGVAGHAVLPLGVERFGQTGTIADLYRANGIDAAAIIERVGTFTSG EEEECCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCC RPVLAFPARPRARSGAAALAG CCEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA