| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148261041
Identifier: 148261041
GI number: 148261041
Start: 2251746
End: 2252264
Strand: Reverse
Name: 148261041
Synonym: Acry_2049
Alternate gene names: NA
Gene position: 2252264-2251746 (Counterclockwise)
Preceding gene: 148261042
Following gene: 148261040
Centisome position: 66.45
GC content: 68.21
Gene sequence:
>519_bases TTGTCGTCCGTCCTTAAGATCCTGCCCCTCGCGGGCCTGCTCGCGCTCGCGGGGTGCGGGTTCCGCCCGCTTTATGGCGG CGGCCAGGCGGGAACCGCCGTCGTCTCGCAGCTCGACGAGATCGATGTCGGCCTGCTGCCGGACCGGCAGGGGCAGTTGC TGCGCCAGGCGCTCGAAGCCGAGTTGCAGCGCGCCGGCGCGCCGTCCTTCTATCGCTACCATCTCGCGGTCGACTATGGC TGGAACGTGCAGATCGTGGGCGTGCAGCCGGACAGCTCGAACACCCGAAACCGCTACATCGCCACCGCGCAATGGACGCT GACGCCCGAGGGCGACCGGAGCCGGATCATCGCCCGCGGCTCGACGCAGGCGATGGATGCGATCGACAACATCGACAACC AGAACTTCGCGGGCACCCTGGATCAGGGCGTGCTGCGCCATCGCTTCGCGAAGCGGCTCGCCCGGCAGATCACGCAGCAG CTCGCGGTCTATTTCCGCAATCACCCCGACCGGGGGTAA
Upstream 100 bases:
>100_bases ACCGCCATCGCGGCGGCGATGGCCGAGCCGCGCATCGCGCAACTTCTGGAAGGGGCGACGATCGTCAAGCGCATCCACGT TCCCGACCGGATCGTGAACT
Downstream 100 bases:
>100_bases GCCGGTGAAGATCGACGCCCGCCACGTCGAGACATTCCTCGCCGATCCGGGCCGCGCGCGGTTCGTTCTTGTCTACGGAC CCGACACCTCGCTGGTTGCC
Product: secreted (periplasmic) protein-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSSVLKILPLAGLLALAGCGFRPLYGGGQAGTAVVSQLDEIDVGLLPDRQGQLLRQALEAELQRAGAPSFYRYHLAVDYG WNVQIVGVQPDSSNTRNRYIATAQWTLTPEGDRSRIIARGSTQAMDAIDNIDNQNFAGTLDQGVLRHRFAKRLARQITQQ LAVYFRNHPDRG
Sequences:
>Translated_172_residues MSSVLKILPLAGLLALAGCGFRPLYGGGQAGTAVVSQLDEIDVGLLPDRQGQLLRQALEAELQRAGAPSFYRYHLAVDYG WNVQIVGVQPDSSNTRNRYIATAQWTLTPEGDRSRIIARGSTQAMDAIDNIDNQNFAGTLDQGVLRHRFAKRLARQITQQ LAVYFRNHPDRG >Mature_171_residues SSVLKILPLAGLLALAGCGFRPLYGGGQAGTAVVSQLDEIDVGLLPDRQGQLLRQALEAELQRAGAPSFYRYHLAVDYGW NVQIVGVQPDSSNTRNRYIATAQWTLTPEGDRSRIIARGSTQAMDAIDNIDNQNFAGTLDQGVLRHRFAKRLARQITQQL AVYFRNHPDRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18920; Mature: 18788
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVLKILPLAGLLALAGCGFRPLYGGGQAGTAVVSQLDEIDVGLLPDRQGQLLRQALEA CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ELQRAGAPSFYRYHLAVDYGWNVQIVGVQPDSSNTRNRYIATAQWTLTPEGDRSRIIARG HHHHCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCEEEECC STQAMDAIDNIDNQNFAGTLDQGVLRHRFAKRLARQITQQLAVYFRNHPDRG CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SSVLKILPLAGLLALAGCGFRPLYGGGQAGTAVVSQLDEIDVGLLPDRQGQLLRQALEA CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ELQRAGAPSFYRYHLAVDYGWNVQIVGVQPDSSNTRNRYIATAQWTLTPEGDRSRIIARG HHHHCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCEEEECC STQAMDAIDNIDNQNFAGTLDQGVLRHRFAKRLARQITQQLAVYFRNHPDRG CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA