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The map label for this gene is ssb [H]

Identifier: 148261030

GI number: 148261030

Start: 2238107

End: 2238592

Strand: Reverse

Name: ssb [H]

Synonym: Acry_2038

Alternate gene names: 148261030

Gene position: 2238592-2238107 (Counterclockwise)

Preceding gene: 148261031

Following gene: 148261023

Centisome position: 66.05

GC content: 66.26

Gene sequence:

>486_bases
ATGGCGGGTAGTGTGAACAAGGTGATCCTGGTTGGAAATCTCGGGCGGGATCCTGAAATGCGGACGACCCAGTCCGGCAT
GAAGATCGTCAATCTCGCGGTCGCGACCTCGGAAACCTGGAACGACAAGATGAGCGGCGAGCGGCAGGAGCGCACCGAGT
GGCACCGCGTCGTCATCATGAACGACCGGCTGGCCGACGTGGCGGAGCGCTTCCTGAAGAAGGGCTCGAAGATCTATCTC
GAGGGCAAGTTGCAGACCCGCAAATGGACCGACCAGTCGGGCCAGGAGAAATACACCACCGAAATCATGTTGGGCCGGAT
CGGCGCCGAGCTGGTGCTGCTCGACCGTGCTGGCGCCGGGGCGGGCGGTGACGACATGCCGCGCCCGGCATCGCGGCCCT
CCGGCGGCGGCGGTGCGCCGCGTGCCGGCGGATGGGATGCCGGGCGGGCCGGCGGCGGCGAACTCGACGACGAAATTCCG
TTCTAG

Upstream 100 bases:

>100_bases
GACCGGCGGGATGGCTGGACAGCATGTCCAAGCCGTGTTGATACCATAGCCGCAGGCAGCCACTCGCTGCCGCGCGGTTC
CGGATGCAAAGGGGAAGACG

Downstream 100 bases:

>100_bases
AGCACTTTCCGATCCTTTCGGATCGGATGTAGTGCTCTATCATATTGATAAACAGAGCATCTTTATCCGATCAGATGACT
CCATCTGATCGGATGATGCT

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MAGSVNKVILVGNLGRDPEMRTTQSGMKIVNLAVATSETWNDKMSGERQERTEWHRVVIMNDRLADVAERFLKKGSKIYL
EGKLQTRKWTDQSGQEKYTTEIMLGRIGAELVLLDRAGAGAGGDDMPRPASRPSGGGGAPRAGGWDAGRAGGGELDDEIP
F

Sequences:

>Translated_161_residues
MAGSVNKVILVGNLGRDPEMRTTQSGMKIVNLAVATSETWNDKMSGERQERTEWHRVVIMNDRLADVAERFLKKGSKIYL
EGKLQTRKWTDQSGQEKYTTEIMLGRIGAELVLLDRAGAGAGGDDMPRPASRPSGGGGAPRAGGWDAGRAGGGELDDEIP
F
>Mature_160_residues
AGSVNKVILVGNLGRDPEMRTTQSGMKIVNLAVATSETWNDKMSGERQERTEWHRVVIMNDRLADVAERFLKKGSKIYLE
GKLQTRKWTDQSGQEKYTTEIMLGRIGAELVLLDRAGAGAGGDDMPRPASRPSGGGGAPRAGGWDAGRAGGGELDDEIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=109, Percent_Identity=33.9449541284404, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1790494, Length=117, Percent_Identity=56.4102564102564, Blast_Score=139, Evalue=1e-34,
Organism=Drosophila melanogaster, GI85725234, Length=100, Percent_Identity=36, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24647376, Length=100, Percent_Identity=36, Blast_Score=70, Evalue=6e-13,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17402; Mature: 17271

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSVNKVILVGNLGRDPEMRTTQSGMKIVNLAVATSETWNDKMSGERQERTEWHRVVIM
CCCCCCEEEEEECCCCCCCCHHHHCCCEEEEEEEECCCCCCCCCCCCHHHCCCEEEEEEE
NDRLADVAERFLKKGSKIYLEGKLQTRKWTDQSGQEKYTTEIMLGRIGAELVLLDRAGAG
CCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCC
AGGDDMPRPASRPSGGGGAPRAGGWDAGRAGGGELDDEIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGSVNKVILVGNLGRDPEMRTTQSGMKIVNLAVATSETWNDKMSGERQERTEWHRVVIM
CCCCCEEEEEECCCCCCCCHHHHCCCEEEEEEEECCCCCCCCCCCCHHHCCCEEEEEEE
NDRLADVAERFLKKGSKIYLEGKLQTRKWTDQSGQEKYTTEIMLGRIGAELVLLDRAGAG
CCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCC
AGGDDMPRPASRPSGGGGAPRAGGWDAGRAGGGELDDEIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]