| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is ppx [H]
Identifier: 148261004
GI number: 148261004
Start: 2206370
End: 2207464
Strand: Reverse
Name: ppx [H]
Synonym: Acry_2012
Alternate gene names: 148261004
Gene position: 2207464-2206370 (Counterclockwise)
Preceding gene: 148261006
Following gene: 148261003
Centisome position: 65.13
GC content: 67.95
Gene sequence:
>1095_bases ATGGCAACCAACGTCGCCGTTCCGCGCTTGTCCGACTCAACGCCCGCCGGTGCAGAACGGCGCGGTGAAGGGCGTGGCGC GCCCGATCGCCGGGCGCGGCCGCCGGCTTTCGCGGCGATTGATCTCGGCACCAATAACTGCCGGATGCTCATCGGCGTGC CGAGCGGCGGCGGTTTCCACGTTCTGGACAGTTTCAGCCGGGTCGTTCGTCTGGGCGAGGGCTTGTATCGCACCGGCATG CTCTCGGATGCGGCGATGGACCGCGCTATCGAGGCCCTCTCCATCTGTGCGGACCGGCAGCGCCGCTGGCAGGTGAGCGC CACCAGGGCGATCGCCACCGAGGCGTGTCGTCAGGCCGAGAATGGCCATGCCTTCATCGCCCGGGCGCGTACCGAAACCG GCCTGCCGATCGAGACGATCTCTCCGCGTGAAGAAATCTGCCTTGCCATGGAGAGCTGCGCCTCGCTCATCACCCAGGCG GAACGGAGGGCTCTCCTGTTCGATATCGGCGGCGGATCCACCGAGATCGCATGGGTCCGCGTGCCCGCCGCGCATGGTGG GTCCGACCGCGTAACGCCTCAATTGATCGGGTACCACACAATTCCCGTCGGAGTCGTCACGCTCTCGGAGCGCTGCGCTG GCTGGTGCGAGACGGAAGCCGGATTCGCCGGCGTGGTGGACGAAGTCAAGGCGCTGCTCCGCCCGTTCGAGGAAACCCAC CGCATCAGCCAGGAAATCCGCATGGGCGGTGTCCGTCTGGTCGGCACCAGCGGCACCGTGACCACTATCGCGGGAATTGC CCTCAATCTCGACCGATATCGCCGTGGCGCGATCGACGGCACGGTGCTGCCGCACGATGTCGTCGCCGCCGGTCTCGAGT CGATCCGCGCAATGGGCCGGGCCCGCCTGACCGAGCATCCCTGCATCGGCGCCGACCGGGTGGATTTCGTCCTTCCCGGT TGCGCGATCTTCGCGGCGATCGAGGAGATGTGGCCGGCCGCCGATCTCGCTGTGGCCGACCGCGGCCTGCGCGAGGGGAT GCTGATGCGCCTCATCCGCAACGCGCGTTCACGTCCGCGCCGCTGCCAGGCATGA
Upstream 100 bases:
>100_bases CGATATGAGGCAATCACCGACTGGCCGCGTTGTCGGTCCCCGAGGTGCGTGCAAATCTGTCTTGCTCTCAGCCCATGGGT CTGCCCATTATATCAATGTC
Downstream 100 bases:
>100_bases CCGAGGAAACCATCGGCTCGCGCCGCCGCGCCGCCGTGCGGCTCAAGGCCGCGCGCAAGCACAAGCCCTCGTCGCAGAAA TGGCTGCTCCGCCAGTTGAA
Product: Ppx/GppA phosphatase
Products: NA
Alternate protein names: ExopolyPase; Metaphosphatase [H]
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MATNVAVPRLSDSTPAGAERRGEGRGAPDRRARPPAFAAIDLGTNNCRMLIGVPSGGGFHVLDSFSRVVRLGEGLYRTGM LSDAAMDRAIEALSICADRQRRWQVSATRAIATEACRQAENGHAFIARARTETGLPIETISPREEICLAMESCASLITQA ERRALLFDIGGGSTEIAWVRVPAAHGGSDRVTPQLIGYHTIPVGVVTLSERCAGWCETEAGFAGVVDEVKALLRPFEETH RISQEIRMGGVRLVGTSGTVTTIAGIALNLDRYRRGAIDGTVLPHDVVAAGLESIRAMGRARLTEHPCIGADRVDFVLPG CAIFAAIEEMWPAADLAVADRGLREGMLMRLIRNARSRPRRCQA
Sequences:
>Translated_364_residues MATNVAVPRLSDSTPAGAERRGEGRGAPDRRARPPAFAAIDLGTNNCRMLIGVPSGGGFHVLDSFSRVVRLGEGLYRTGM LSDAAMDRAIEALSICADRQRRWQVSATRAIATEACRQAENGHAFIARARTETGLPIETISPREEICLAMESCASLITQA ERRALLFDIGGGSTEIAWVRVPAAHGGSDRVTPQLIGYHTIPVGVVTLSERCAGWCETEAGFAGVVDEVKALLRPFEETH RISQEIRMGGVRLVGTSGTVTTIAGIALNLDRYRRGAIDGTVLPHDVVAAGLESIRAMGRARLTEHPCIGADRVDFVLPG CAIFAAIEEMWPAADLAVADRGLREGMLMRLIRNARSRPRRCQA >Mature_363_residues ATNVAVPRLSDSTPAGAERRGEGRGAPDRRARPPAFAAIDLGTNNCRMLIGVPSGGGFHVLDSFSRVVRLGEGLYRTGML SDAAMDRAIEALSICADRQRRWQVSATRAIATEACRQAENGHAFIARARTETGLPIETISPREEICLAMESCASLITQAE RRALLFDIGGGSTEIAWVRVPAAHGGSDRVTPQLIGYHTIPVGVVTLSERCAGWCETEAGFAGVVDEVKALLRPFEETHR ISQEIRMGGVRLVGTSGTVTTIAGIALNLDRYRRGAIDGTVLPHDVVAAGLESIRAMGRARLTEHPCIGADRVDFVLPGC AIFAAIEEMWPAADLAVADRGLREGMLMRLIRNARSRPRRCQA
Specific function: Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate of circa 500 residues long, while chains of circa 15 residues compete poorly with polyphosphate as substrate [H]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI1788848, Length=328, Percent_Identity=27.7439024390244, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI48994966, Length=234, Percent_Identity=32.9059829059829, Blast_Score=90, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022371 - InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: =3.6.1.11 [H]
Molecular weight: Translated: 39117; Mature: 38986
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNVAVPRLSDSTPAGAERRGEGRGAPDRRARPPAFAAIDLGTNNCRMLIGVPSGGGFH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCHH VLDSFSRVVRLGEGLYRTGMLSDAAMDRAIEALSICADRQRRWQVSATRAIATEACRQAE HHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NGHAFIARARTETGLPIETISPREEICLAMESCASLITQAERRALLFDIGGGSTEIAWVR CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEE VPAAHGGSDRVTPQLIGYHTIPVGVVTLSERCAGWCETEAGFAGVVDEVKALLRPFEETH EECCCCCCCCCCHHHHCEEECCHHEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH RISQEIRMGGVRLVGTSGTVTTIAGIALNLDRYRRGAIDGTVLPHDVVAAGLESIRAMGR HHHHHHHHCCEEEEECCCCHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH ARLTEHPCIGADRVDFVLPGCAIFAAIEEMWPAADLAVADRGLREGMLMRLIRNARSRPR HHCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCC RCQA CCCC >Mature Secondary Structure ATNVAVPRLSDSTPAGAERRGEGRGAPDRRARPPAFAAIDLGTNNCRMLIGVPSGGGFH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCHH VLDSFSRVVRLGEGLYRTGMLSDAAMDRAIEALSICADRQRRWQVSATRAIATEACRQAE HHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NGHAFIARARTETGLPIETISPREEICLAMESCASLITQAERRALLFDIGGGSTEIAWVR CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEE VPAAHGGSDRVTPQLIGYHTIPVGVVTLSERCAGWCETEAGFAGVVDEVKALLRPFEETH EECCCCCCCCCCHHHHCEEECCHHEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH RISQEIRMGGVRLVGTSGTVTTIAGIALNLDRYRRGAIDGTVLPHDVVAAGLESIRAMGR HHHHHHHHCCEEEEECCCCHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH ARLTEHPCIGADRVDFVLPGCAIFAAIEEMWPAADLAVADRGLREGMLMRLIRNARSRPR HHCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCC RCQA CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]